MELO3C007030.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007030.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	RING-H2 finger protein ATL74-like
Location	chr08 : 317134 .. 317425 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCTTTAAGGGGACTGAACTCGGGCATGAAGAAGCAAGACGTGGTTGCCCTCCCAACTTCAACTTACACGAACTCTGGATCACCGACTTCGCCTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAATGGGGATACAATACGAGTGTTGCCGAACTGTGCTCATAGGTACCATGTCAGTTGCATTGATAAATGGTTGCTGTCTCACTCTTCTTGCCCCACCTGCAGGCATCAGCTCAAGTCCAAGGATTCTATAGAACACATTGTGTAG

mRNA sequence

ATGGGTGGCTTTAAGGGGACTGAACTCGGGCATGAAGAAGCAAGACGTGGTTGCCCTCCCAACTTCAACTTACACGAACTCTGGATCACCGACTTCGCCTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAATGGGGATACAATACGAGTGTTGCCGAACTGTGCTCATAGGTACCATGTCAGTTGCATTGATAAATGGTTGCTGTCTCACTCTTCTTGCCCCACCTGCAGGCATCAGCTCAAGTCCAAGGATTCTATAGAACACATTGTGTAG

Coding sequence (CDS)

ATGAAGAAGCAAGACGTGGTTGCCCTCCCAACTTCAACTTACACGAACTCTGGATCACCGACTTCGCCTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAATGGGGATACAATACGAGTGTTGCCGAACTGTGCTCATAGGTACCATGTCAGTTGCATTGATAAATGGTTGCTGTCTCACTCTTCTTGCCCCACCTGCAGGCATCAGCTCAAGTCCAAGGATTCTATAGAACACATTGTGTAG

Protein sequence

MKKQDVVALPTSTYTNSGSPTSPSPSSTSACAICLIDFSNGDTIRVLPNCAHRYHVSCIDKWLLSHSSCPTCRHQLKSKDSIEHIV

Homology

[Close]

BLAST of MELO3C007030.2 vs. NCBI nr
Match: ADN34219.1 (ring zinc finger [Cucumis melo subsp. melo])

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID
Sbjct: 62  MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 121

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSIEHIV
Sbjct: 122 KWLLSHSSCPTCRHQLKSKDSIEHIV 147

[Close]

BLAST of MELO3C007030.2 vs. NCBI nr
Match: XP_008439485.1 (PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID
Sbjct: 85  MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 144

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSIEHIV
Sbjct: 145 KWLLSHSSCPTCRHQLKSKDSIEHIV 170

[Close]

BLAST of MELO3C007030.2 vs. NCBI nr
Match: XP_004134885.2 (PREDICTED: RING-H2 finger protein ATL74-like [Cucumis sativus] >KGN49508.1 hypothetical protein Csa_6G526420 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 7.8e-32
Identity = 69/86 (80.23%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQD+VALPTSTYTNSGS             ICLIDFSNGD +RVLPNCAHRYHVSCID
Sbjct: 85  MKKQDMVALPTSTYTNSGS--PISPSSTSACAICLIDFSNGDKVRVLPNCAHRYHVSCID 144

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSI+HIV
Sbjct: 145 KWLLSHSSCPTCRHQLKSKDSIDHIV 168

[Close]

BLAST of MELO3C007030.2 vs. NCBI nr
Match: XP_022146710.1 (RING-H2 finger protein ATL74-like [Momordica charantia])

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 60/85 (70.59%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQD+VALPTSTY NS S             ICL+DF NGD IRVLPNC HRYHV+CID
Sbjct: 110 MKKQDMVALPTSTYRNSSS-------PTSVCAICLVDFLNGDEIRVLPNCTHRYHVTCID 169

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHI 86
           KWLL HSSCPTCRHQLKSKDSI  +
Sbjct: 170 KWLLCHSSCPTCRHQLKSKDSISSV 187

[Close]

BLAST of MELO3C007030.2 vs. NCBI nr
Match: XP_022977991.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-26
Identity = 61/90 (67.78%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQD++ALPTSTYTNS S             ICL+DFSNGD +R+LPNCAHRYHV+CID
Sbjct: 99  MKKQDMIALPTSTYTNSDS-------PTSACAICLVDFSNGDKLRMLPNCAHRYHVACID 158

Query: 61  KWLLSHSSCPTCRHQLK----SKDSIEHIV 87
           +WLLSHSSCPTCRHQLK    S  SI HIV
Sbjct: 159 QWLLSHSSCPTCRHQLKPPKDSATSIHHIV 181

[Close]

BLAST of MELO3C007030.2 vs. TAIR10
Match: AT2G17450.1 (RING-H2 finger A3A)

HSP 1 Score: 79.7 bits (195), Expect = 9.6e-16
Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYT--NSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSC 60
           +KK+ + +LP ST+T   S S             ICL DF++G+ IRVLP C H +HV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 61  IDKWLLSHSSCPTCRHQL 77
           IDKWL+S SSCP+CR  L
Sbjct: 130 IDKWLVSRSSCPSCRRIL 147

[Close]

BLAST of MELO3C007030.2 vs. TAIR10
Match: AT4G35480.1 (RING-H2 finger A3B)

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-15
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGS----------XXXXXXXXXXXXXICLIDFSNGDTIRVLPNC 60
           +KK+ + ALP STYT S S                       IC+ +FS G+ IR+LP C
Sbjct: 73  LKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLC 132

Query: 61  AHRYHVSCIDKWLLSHSSCPTCRHQL 77
           +H +HV+CIDKWL S SSCP+CR  L
Sbjct: 133 SHAFHVACIDKWLTSRSSCPSCRRIL 158

[Close]

BLAST of MELO3C007030.2 vs. TAIR10
Match: AT5G05280.1 (RING/U-box superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-14
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 33  ICLIDFSNGDTIRVLPNCAHRYHVSCIDKWLLSHSSCPTCRHQL 77
           ICL DF  G+T+RVLP C H +HV CID WLLSHSSCPTCR  L
Sbjct: 115 ICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158

[Close]

BLAST of MELO3C007030.2 vs. TAIR10
Match: AT5G01880.1 (RING/U-box superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-14
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+++   P + Y  SG              ICL +F++G+ +RVLP C H +H+SCID
Sbjct: 80  LKKRELKKFPVAEY-GSGE----VKIAATECAICLGEFADGERVRVLPPCNHSFHMSCID 139

Query: 61  KWLLSHSSCPTCRHQL 77
            WL+SHSSCP CRH L
Sbjct: 140 TWLVSHSSCPNCRHSL 150

[Close]

BLAST of MELO3C007030.2 vs. TAIR10
Match: AT1G76410.1 (RING/U-box superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-14
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+ + +LP  TY    S             ICL +F+ GD +RVLP C H +HVSCID
Sbjct: 78  LKKKVLRSLPKLTY----SPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCID 137

Query: 61  KWLLSHSSCPTCRHQL 77
            WL SHSSCP+CR  L
Sbjct: 138 TWLGSHSSCPSCRQIL 149

[Close]

BLAST of MELO3C007030.2 vs. Swiss-Prot
Match: sp|O22755|ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-14
Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYT--NSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSC 60
           +KK+ + +LP ST+T   S S             ICL DF++G+ IRVLP C H +HV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 61  IDKWLLSHSSCPTCRHQL 77
           IDKWL+S SSCP+CR  L
Sbjct: 130 IDKWLVSRSSCPSCRRIL 147

[Close]

BLAST of MELO3C007030.2 vs. Swiss-Prot
Match: sp|Q9ZT49|ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.6e-14
Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGS----------XXXXXXXXXXXXXICLIDFSNGDTIRVLPNC 60
           +KK+ + ALP STYT S S                       IC+ +FS G+ IR+LP C
Sbjct: 73  LKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLC 132

Query: 61  AHRYHVSCIDKWLLSHSSCPTCRHQL 77
           +H +HV+CIDKWL S SSCP+CR  L
Sbjct: 133 SHAFHVACIDKWLTSRSSCPSCRRIL 158

[Close]

BLAST of MELO3C007030.2 vs. Swiss-Prot
Match: sp|Q9FLC6|ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.5e-13
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 33  ICLIDFSNGDTIRVLPNCAHRYHVSCIDKWLLSHSSCPTCRHQL 77
           ICL DF  G+T+RVLP C H +HV CID WLLSHSSCPTCR  L
Sbjct: 115 ICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158

[Close]

BLAST of MELO3C007030.2 vs. Swiss-Prot
Match: sp|Q9LZV8|ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.6e-13
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+++   P + Y  SG              ICL +F++G+ +RVLP C H +H+SCID
Sbjct: 80  LKKRELKKFPVAEY-GSGE----VKIAATECAICLGEFADGERVRVLPPCNHSFHMSCID 139

Query: 61  KWLLSHSSCPTCRHQL 77
            WL+SHSSCP CRH L
Sbjct: 140 TWLVSHSSCPNCRHSL 150

[Close]

BLAST of MELO3C007030.2 vs. Swiss-Prot
Match: sp|Q8LC69|ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-12
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+ + +LP  TY    S             ICL +F+ GD +RVLP C H +HVSCID
Sbjct: 78  LKKKVLRSLPKLTY----SPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCID 137

Query: 61  KWLLSHSSCPTCRHQL 77
            WL SHSSCP+CR  L
Sbjct: 138 TWLGSHSSCPSCRQIL 149

[Close]

BLAST of MELO3C007030.2 vs. TrEMBL
Match: tr|A0A1S3AYW1|A0A1S3AYW1_CUCME (RING-H2 finger protein ATL74-like OS=Cucumis melo OX=3656 GN=LOC103484271 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-35
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID
Sbjct: 85  MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 144

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSIEHIV
Sbjct: 145 KWLLSHSSCPTCRHQLKSKDSIEHIV 170

[Close]

BLAST of MELO3C007030.2 vs. TrEMBL
Match: tr|E5GCL9|E5GCL9_CUCME (Ring zinc finger OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-35
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID
Sbjct: 62  MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 121

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSIEHIV
Sbjct: 122 KWLLSHSSCPTCRHQLKSKDSIEHIV 147

[Close]

BLAST of MELO3C007030.2 vs. TrEMBL
Match: tr|A0A0A0KJ24|A0A0A0KJ24_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526420 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.2e-32
Identity = 69/86 (80.23%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           MKKQD+VALPTSTYTNSGS             ICLIDFSNGD +RVLPNCAHRYHVSCID
Sbjct: 85  MKKQDMVALPTSTYTNSGS--PISPSSTSACAICLIDFSNGDKVRVLPNCAHRYHVSCID 144

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHIV 87
           KWLLSHSSCPTCRHQLKSKDSI+HIV
Sbjct: 145 KWLLSHSSCPTCRHQLKSKDSIDHIV 168

[Close]

BLAST of MELO3C007030.2 vs. TrEMBL
Match: tr|A0A2I4GBE1|A0A2I4GBE1_9ROSI (RING-H2 finger protein ATL74-like OS=Juglans regia OX=51240 GN=LOC109006368 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-24
Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+++VALPTSTYTNSGS             ICL+DF++G+ IRVLP C+HR+HV+CID
Sbjct: 81  LKKKEMVALPTSTYTNSGS-----PSSASGCAICLVDFADGEKIRVLPKCSHRFHVACID 140

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHI 86
           KWLLSHSSCPTCRH+LKS D + H+
Sbjct: 141 KWLLSHSSCPTCRHRLKSSDCMPHL 160

[Close]

BLAST of MELO3C007030.2 vs. TrEMBL
Match: tr|A0A061DVX2|A0A061DVX2_THECC (RING/U-box superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_006010 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 1   MKKQDVVALPTSTYTNSGSXXXXXXXXXXXXXICLIDFSNGDTIRVLPNCAHRYHVSCID 60
           +KK+++VALPTSTY NSGS             ICL DF +GD IR+LP C HR+HV+CID
Sbjct: 138 LKKKEMVALPTSTYANSGS-----PSSASGCAICLADFLDGDEIRMLPKCDHRFHVACID 197

Query: 61  KWLLSHSSCPTCRHQLKSKDSIEHI 86
           KWLLSHSSCPTCRH+LKS DS+  +
Sbjct: 198 KWLLSHSSCPTCRHRLKSNDSMSSL 217

The following BLAST results are available for this feature:

BLAST of MELO3C007030.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34219.1	1.3e-34	100.00	ring zinc finger [Cucumis melo subsp. melo]	[more]
XP_008439485.1	1.3e-34	100.00	PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]	[more]
XP_004134885.2	7.8e-32	80.23	PREDICTED: RING-H2 finger protein ATL74-like [Cucumis sativus] >KGN49508.1 hypot...	[more]
XP_022146710.1	2.2e-26	70.59	RING-H2 finger protein ATL74-like [Momordica charantia]	[more]
XP_022977991.1	4.9e-26	67.78	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]

BLAST of MELO3C007030.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17450.1	9.6e-16	48.72	RING-H2 finger A3A	[more]
AT4G35480.1	4.8e-15	44.19	RING-H2 finger A3B	[more]
AT5G05280.1	1.4e-14	70.45	RING/U-box superfamily protein	[more]
AT5G01880.1	3.1e-14	44.74	RING/U-box superfamily protein	[more]
AT1G76410.1	6.9e-14	47.37	RING/U-box superfamily protein	[more]

BLAST of MELO3C007030.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22755\|ATL44_ARATH	1.7e-14	48.72	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9ZT49\|ATL45_ARATH	8.6e-14	44.19	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9FLC6\|ATL73_ARATH	2.5e-13	70.45	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
sp\|Q9LZV8\|ATL74_ARATH	5.6e-13	44.74	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
sp\|Q8LC69\|ATL8_ARATH	1.2e-12	47.37	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]

BLAST of MELO3C007030.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYW1\|A0A1S3AYW1_CUCME	8.5e-35	100.00	RING-H2 finger protein ATL74-like OS=Cucumis melo OX=3656 GN=LOC103484271 PE=4 S...	[more]
tr\|E5GCL9\|E5GCL9_CUCME	8.5e-35	100.00	Ring zinc finger OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0KJ24\|A0A0A0KJ24_CUCSA	5.2e-32	80.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526420 PE=4 SV=1	[more]
tr\|A0A2I4GBE1\|A0A2I4GBE1_9ROSI	2.3e-24	62.35	RING-H2 finger protein ATL74-like OS=Juglans regia OX=51240 GN=LOC109006368 PE=4...	[more]
tr\|A0A061DVX2\|A0A061DVX2_THECC	2.2e-22	61.18	RING/U-box superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_006010 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0010200	response to chitin
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007030.2.1	MELO3C007030.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 31..72 e-value: 1.5E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 30..73 e-value: 1.3E-13 score: 50.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 31..73 score: 12.032
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 1..83 e-value: 4.7E-21 score: 75.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..78
None	No IPR available	PANTHER	PTHR14155:SF133	SUBFAMILY NOT NAMED	coord: 1..78
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..31 score: 6.0
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 30..79

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007030.2	Csa6G526420	Cucumber (Chinese Long) v2	cumedB486
MELO3C007030.2	CSPI06G37310	Wild cucumber (PI 183967)	cpimedB496
MELO3C007030.2	Cucsa.048690	Cucumber (Gy14) v1	cgymedB025
MELO3C007030.2	CmaCh03G014820	Cucurbita maxima (Rimu)	cmamedB704
MELO3C007030.2	Lsi01G000410	Bottle gourd (USVL1VR-Ls)	lsimedB156
MELO3C007030.2	CsGy6G036670	Cucumber (Gy14) v2	cgybmedB442
MELO3C007030.2	Cla009871	Watermelon (97103) v1	medwmB561
MELO3C007030.2	ClCG01G025550	Watermelon (Charleston Gray)	medwcgB510
MELO3C007030.2	Cla97C01G025700	Watermelon (97103) v2	medwmbB507
MELO3C007030.2	CsaV3_6G052800	Cucumber (Chinese Long) v3	cucmedB508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007030.2	Cucurbita maxima (Rimu)	cmamedB897
MELO3C007030.2	Cucurbita moschata (Rifu)	cmomedB695
MELO3C007030.2	Cucurbita moschata (Rifu)	cmomedB886
MELO3C007030.2	Cucurbita pepo (Zucchini)	cpemedB081
MELO3C007030.2	Cucurbita pepo (Zucchini)	cpemedB540
MELO3C007030.2	Silver-seed gourd	carmedB0736
MELO3C007030.2	Silver-seed gourd	carmedB0857
MELO3C007030.2	Wax gourd	medwgoB657