MELO3C007017.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007017.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Transcription factor, MADS-box
Location	chr08 : 213690 .. 214795 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAACCTTTACCCTACCAAGGACATAAATATATATAGTTTTTAGGCGCGGGGGGTATAGGAGAGAATCAAGAAATCATAATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGGTATTAATTATTATTTCTTCTTCGTTTTTTTTAAAAAAAATTATATATAATATTTACTTCTTCTACACACTTCCTGCCTGTGGATATCCTCAGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGTAGCACACTTAATTCATTAAATAATCTCATTTCATCTCATCTCTCATCTCCTCATATTTATCAGTATTATATTAAACTAAATAATTTATTGAAATAAATTAGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGAGTTCGTGCTCGAAAGGCATTATTATTAATATTATTTTCCATTTTACTACCTTTTTCTCTCTAAATATATATACATATATATATATATATATATATATATACATACATATACATAGATATTTATTAGGGTTTACTTAATTAATTAATTAATTATAGGGTTTTGTATTGGTTTTTTTGGTGCAGTCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGTTTTACTTATTTATTTTCGTTCCTTCATTCTTGTAAATTAACATATAATACATATAAGTAATTATATGATTTAATTTAATTCATTAATAACCTGGTTTTTTCATTTTTCCCTTTAATTTTGCATGATGATACTAATTAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

mRNA sequence

CTTTAACCTTTACCCTACCAAGGACATAAATATATATAGTTTTTAGGCGCGGGGGGTATAGGAGAGAATCAAGAAATCATAATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGATCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

Coding sequence (CDS)

ATGGGAAGAGGAAAAATCGCAATCAGGAGAATAGAGAATCGGACGACAAGGCAAGTTACATTCTCGAAGCGGAGAGGCGGTCTGTTCAAGAAGACCCATGAACTTTCTGTTTTATGTGATGCTCAGATCGCTCTCATCGTCTTCTCCAGCAACGGCAAATTGTTCGAATACTGTACTCAAACAACATGCATGGATCAAATCATCAGGAGATATCAGATTGCAATAGGGAGTCGAATTCCAGAGCATAATATGAACGATCCGGAGGAATTGGAGCGGCAAGTAAGGTCAATGAAAAAAGAAACGGACGATCTTCAGCTGAGTTTGCAGCGCTACACAGCCGAGGATTTTAGCACTTTTCACCTTCGCGATCTCGACGATATCGAGAACCGTCTCCAAAACTCTCTCAACAGATCAGAGCTGTTACAGCAGCAAGTCGACAATCTGCGAAGAAAGGAGAAAATTCTGGAGGATGAAAATGAACAGATTTACCATCTGGTAATCAATTAA

Protein sequence

MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQTTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFHLRDLDDIENRLQNSLNRSELLQQQVDNLRRKEKILEDENEQIYHLVIN

Homology

[Close]

BLAST of MELO3C007017.2 vs. NCBI nr
Match: XP_008439464.1 (PREDICTED: MADS-box protein FBP24 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 6.6e-75
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 149
           LRDLDDIENRLQNSLNRSELLQQQVDNL
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 148

[Close]

BLAST of MELO3C007017.2 vs. NCBI nr
Match: XP_011658351.1 (PREDICTED: MADS-box protein FBP24 isoform X3 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.5e-74
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 149
           LRDLDDIENRLQNSLNRSELLQQQVDNL
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 148

[Close]

BLAST of MELO3C007017.2 vs. NCBI nr
Match: XP_004134531.2 (PREDICTED: MADS-box protein FBP24 isoform X1 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71
Identity = 145/151 (96.03%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVD 147
           LRDLDDIENRLQNSLNR     SELLQQQVD
Sbjct: 121 LRDLDDIENRLQNSLNRVRARKSELLQQQVD 151

[Close]

BLAST of MELO3C007017.2 vs. NCBI nr
Match: XP_011658350.1 (PREDICTED: MADS-box protein FBP24 isoform X2 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71
Identity = 145/151 (96.03%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVD 147
           LRDLDDIENRLQNSLNR     SELLQQQVD
Sbjct: 121 LRDLDDIENRLQNSLNRVRARKSELLQQQVD 151

[Close]

BLAST of MELO3C007017.2 vs. NCBI nr
Match: XP_011658354.1 (PREDICTED: MADS-box protein FBP24 isoform X6 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 2.6e-71
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTA+DFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTADDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQ 143
           LRDLDDIENRLQNSLNRSELLQ
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQ 142

[Close]

BLAST of MELO3C007017.2 vs. TAIR10
Match: AT5G23260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 150.6 bits (379), Expect = 8.6e-37
Identity = 79/168 (47.02%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+      ++EL+QQQ++NL RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMY 167

[Close]

BLAST of MELO3C007017.2 vs. TAIR10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 66/171 (38.60%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRG++ ++RIEN+  RQVTFSKRR GL KK HE+SVLCDA++AL+VFS  GKLFEY T 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  TTCMDQIIRRYQ-IAIGSR---IPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDF 120
            +CM++I+ RY+  +   R    PE ++N    +E     +K + + L+ + + Y  ED 
Sbjct: 61  -SCMEKILERYERYSYAERQLIAPESDVNTNWSME--YNRLKAKIELLERNQRHYLGEDL 120

Query: 121 STFHLRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQI 163
                ++L ++E +L  +L      +++L+ + ++ L++KEK ++++N  +
Sbjct: 121 QAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168

[Close]

BLAST of MELO3C007017.2 vs. TAIR10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 64/171 (37.43%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRG++ ++RIEN+  RQVTFSKRR GL KK  E+SVLCDA+++LIVFS  GKLFEY ++
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  TTCMDQIIRRYQ-IAIGSR---IPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDF 120
            +CM++++ RY+  +   R    P+ ++N       +   +K + + L+ + + Y  E+ 
Sbjct: 61  -SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEEL 120

Query: 121 STFHLRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQI 163
               L+DL ++E +L+ +L      +++L+ + +++L+RKEK +++EN  +
Sbjct: 121 EPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSML 170

[Close]

BLAST of MELO3C007017.2 vs. TAIR10
Match: AT5G60910.1 (AGAMOUS-like 8)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 64/169 (37.87%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRG++ ++RIEN+  RQVTFSKRR GL KK HE+SVLCDA++ALIVFSS GKLFEY T 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  TTCMDQIIRRYQIAIGS--RIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFST 120
            +CM++I+ RY   + S  ++   +++  E    +   +K   + L+ + + +  ED  +
Sbjct: 61  -SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDS 120

Query: 121 FHLRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQI 163
             L++L  +E++L  ++      +++ + + +  L++K+K L+D N  +
Sbjct: 121 LSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSL 168

[Close]

BLAST of MELO3C007017.2 vs. TAIR10
Match: AT5G20240.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-27
Identity = 65/163 (39.88%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I+RIEN   R VTFSKRR GL KK  E++VLCDA++ALI+F+SNGK+ +YC  
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           +  +  ++ +YQ   G ++ +      E L  ++  +KKE D LQL L+    ED  + +
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAK---HENLSNEIDRIKKENDSLQLELRHLKGEDIQSLN 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQV-DNLRRKEKILEDENEQI 163
           L++L  +E+ +++ L++    Q ++  + RR EK++ +E  Q+
Sbjct: 121 LKNLMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQL 160

[Close]

BLAST of MELO3C007017.2 vs. Swiss-Prot
Match: sp|Q9ATE5|FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-41
Identity = 91/173 (52.60%), Postives = 126/173 (72.83%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI ++RIEN+T+RQVTFSKRR GL KKTHELSVLCDAQI LI+FSS GKLFEYC+Q
Sbjct: 4   MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQ 63

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M QII RY    G+ +P    ++  +L  +V  M+++T +LQLSLQRY  +D S   
Sbjct: 64  PHSMSQIISRYLQTTGASLPVE--DNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQ 123

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
             +L+++E +L+++LN     + EL+QQQ++NL++ EK+LE EN  +Y  ++N
Sbjct: 124 YEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMN 174

[Close]

BLAST of MELO3C007017.2 vs. Swiss-Prot
Match: sp|Q8RVL4|DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.8e-39
Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI ++RIEN T+RQVTFSKRR GL KKTHELSVLCDAQI LIVFS+ GKL EYCT 
Sbjct: 1   MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTP 60

Query: 61  TTCMDQIIRRYQIAIG------SRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAE 120
              M QII RY  A G      +R   H  ND  ++ +++  MK+ET +LQL+LQRY  +
Sbjct: 61  PFSMKQIIDRYVKAKGILPEMENRAGPHADND--QVIKELTRMKEETLNLQLNLQRYKGD 120

Query: 121 DFSTFHLRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
           D ST    +L ++E  L  SLN     + ELL +Q++NL+R E +LE EN+++YH +++
Sbjct: 121 DLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMS 177

[Close]

BLAST of MELO3C007017.2 vs. Swiss-Prot
Match: sp|Q8VWM8|M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-38
Identity = 81/171 (47.37%), Postives = 121/171 (70.76%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I+RIEN T RQVTFSKRRGGL KK +EL+VLCDA++ +++FSS GK+FEYC+ 
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              + ++I +YQ A  S   E  +N  +++  ++  MK E + L+  ++RYT +D S+  
Sbjct: 61  ACSLRELIEQYQHATNSHFEE--INHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLT 120

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLV 167
           L D+ D+E +L+ S++     + +LL QQ+DNLRRKE+ILED+N  +Y ++
Sbjct: 121 LDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMI 169

[Close]

BLAST of MELO3C007017.2 vs. Swiss-Prot
Match: sp|Q9XGJ4|GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 84/171 (49.12%), Postives = 121/171 (70.76%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I+RIEN T RQVTFSKRRGGL KK HELSVLCDA++ LI+FSS+GKLFEY + 
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           ++ M +II RYQ   G+RI E+   D + L  ++  MK E + LQ +++R   ED ++  
Sbjct: 61  SSSMKKIIERYQKVSGARITEY---DNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLT 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
           + +L  +  +L+++ +R     ++L+ QQ++NLRRKE+ILED+N  +  L+
Sbjct: 121 MTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLL 168

[Close]

BLAST of MELO3C007017.2 vs. Swiss-Prot
Match: sp|Q8RYD9|TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 79/168 (47.02%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I++IEN+T RQVTFSKRR GL KKT ELS+LCDA I LIVFS+ GKL E+C++
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
              M Q+I RY    G R+P+H+ +D E+L  ++  +++ET +L+L L+ +   D ++  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHH-DDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIP 120

Query: 121 LRDLDDIENRLQNSL-----NRSELLQQQVDNLRRKEKILEDENEQIY 164
             +LD +E +L++S+      ++EL+QQQ++NL RK ++LE++N  +Y
Sbjct: 121 PNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMY 167

[Close]

BLAST of MELO3C007017.2 vs. TrEMBL
Match: tr|A0A1S3AYU5|A0A1S3AYU5_CUCME (MADS-box protein FBP24 OS=Cucumis melo OX=3656 GN=LOC103484259 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.3e-75
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ
Sbjct: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH
Sbjct: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120

Query: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 149
           LRDLDDIENRLQNSLNRSELLQQQVDNL
Sbjct: 121 LRDLDDIENRLQNSLNRSELLQQQVDNL 148

[Close]

BLAST of MELO3C007017.2 vs. TrEMBL
Match: tr|A0A218XMX8|A0A218XMX8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr011127 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 105/173 (60.69%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIEN+TTRQVTF+KRR GLFKKT+ELSVLCDAQI LIVFSS GKLF+Y ++
Sbjct: 1   MGRGKIAIRRIENKTTRQVTFAKRRAGLFKKTNELSVLCDAQIGLIVFSSTGKLFQYTSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
            + M+QII RY  A GS++P+   +D ++++ ++R M++ET +LQLSLQ YTA D ST  
Sbjct: 61  ASSMEQIISRYLTATGSQMPQPT-DDQQQVQAELRRMRRETHNLQLSLQHYTANDLSTVR 120

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
           + DL+++E +++ SLN     + ELLQQQ DNLRRKEK+L+DENE+I+H++ N
Sbjct: 121 IEDLNNLEQQVEYSLNKVRARKYELLQQQTDNLRRKEKMLQDENEKIFHMIKN 172

[Close]

BLAST of MELO3C007017.2 vs. TrEMBL
Match: tr|A0A2I0HIM3|A0A2I0HIM3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_048070 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 105/173 (60.69%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKIAIRRIEN+TTRQVTF+KRR GLFKKT+ELSVLCDAQI LIVFSS GKLF+Y ++
Sbjct: 51  MGRGKIAIRRIENKTTRQVTFAKRRAGLFKKTNELSVLCDAQIGLIVFSSTGKLFQYTSE 110

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
            + M+QII RY  A GS++P+   +D ++++ ++R M++ET +LQLSLQ YTA D ST  
Sbjct: 111 ASSMEQIISRYLTATGSQMPQPT-DDQQQVQAELRRMRRETHNLQLSLQHYTANDLSTVR 170

Query: 121 LRDLDDIENRLQNSLN-----RSELLQQQVDNLRRKEKILEDENEQIYHLVIN 169
           + DL+++E +++ SLN     + ELLQQQ DNLRRKEK+L+DENE+I+H++ N
Sbjct: 171 IEDLNNLEQQVEYSLNKVRARKYELLQQQTDNLRRKEKMLQDENEKIFHMIKN 222

[Close]

BLAST of MELO3C007017.2 vs. TrEMBL
Match: tr|A0A251PJ11|A0A251PJ11_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G113500 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46
Identity = 99/171 (57.89%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I RIENRTTRQVTF+KRR GL KKTHELSVLCDAQI L++FSS GK+F+YC++
Sbjct: 1   MGRGKITISRIENRTTRQVTFAKRRAGLIKKTHELSVLCDAQIGLVIFSSTGKMFQYCSE 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           ++ M+++I+RYQ+A G+RI +H  ND E +  ++R M++ET  L+LSLQRYT ED S   
Sbjct: 61  SSSMEELIQRYQVARGTRIFQH--NDTEYMNAELRKMRRETQSLELSLQRYTGEDLSCVR 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
             DL ++E++L+ S+NR      E+LQQQ+DNLR   K  E+ENEQ++HL+
Sbjct: 121 FEDLVELEHQLEESVNRVRARKFEVLQQQIDNLRATTKRREEENEQLFHLI 169

[Close]

BLAST of MELO3C007017.2 vs. TrEMBL
Match: tr|A0A2P6Q787|A0A2P6Q787_ROSCH (Putative transcription factor MADS-MIKC family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0020391 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46
Identity = 100/171 (58.48%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 1   MGRGKIAIRRIENRTTRQVTFSKRRGGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCTQ 60
           MGRGKI I RIENRTTRQVTF+KRR GL KKTHELSVLCD QI L++FSS GK+F+YC+ 
Sbjct: 1   MGRGKIHISRIENRTTRQVTFAKRRAGLLKKTHELSVLCDVQIGLVIFSSTGKMFQYCSD 60

Query: 61  TTCMDQIIRRYQIAIGSRIPEHNMNDPEELERQVRSMKKETDDLQLSLQRYTAEDFSTFH 120
           +T M++IIRRYQ A G+RIP+H  +D + L  ++R ++KET DL LSLQRYT ED S   
Sbjct: 61  STSMEEIIRRYQYASGTRIPQH--SDTDFLNAEIRKIRKETQDLHLSLQRYTGEDLSCVR 120

Query: 121 LRDLDDIENRLQNSLNR-----SELLQQQVDNLRRKEKILEDENEQIYHLV 167
             DL+++ENRL+ S+NR      E+LQQ+V NLR   K  E++N+++ HL+
Sbjct: 121 FEDLEELENRLEESVNRVRARKFEILQQEVHNLRLSTKQREEQNDELCHLI 169

The following BLAST results are available for this feature:

BLAST of MELO3C007017.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439464.1	6.6e-75	100.00	PREDICTED: MADS-box protein FBP24 [Cucumis melo]	[more]
XP_011658351.1	1.5e-74	99.32	PREDICTED: MADS-box protein FBP24 isoform X3 [Cucumis sativus]	[more]
XP_004134531.2	1.5e-71	96.03	PREDICTED: MADS-box protein FBP24 isoform X1 [Cucumis sativus]	[more]
XP_011658350.1	1.5e-71	96.03	PREDICTED: MADS-box protein FBP24 isoform X2 [Cucumis sativus]	[more]
XP_011658354.1	2.6e-71	99.30	PREDICTED: MADS-box protein FBP24 isoform X6 [Cucumis sativus]	[more]

BLAST of MELO3C007017.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23260.2	8.6e-37	47.02	K-box region and MADS-box transcription factor family protein	[more]
AT1G69120.1	1.2e-27	38.60	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	1.6e-27	37.43	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	3.6e-27	37.87	AGAMOUS-like 8	[more]
AT5G20240.1	6.2e-27	39.88	K-box region and MADS-box transcription factor family protein	[more]

BLAST of MELO3C007017.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ATE5\|FBP24_PETHY	2.5e-41	52.60	MADS-box protein FBP24 OS=Petunia hybrida OX=4102 GN=FBP24 PE=1 SV=1	[more]
sp\|Q8RVL4\|DEF21_ANTMA	6.8e-39	52.51	MADS-box protein defh21 OS=Antirrhinum majus OX=4151 GN=DEFH21 PE=2 SV=1	[more]
sp\|Q8VWM8\|M17_MAIZE	9.7e-38	47.37	MADS-box protein ZMM17 OS=Zea mays OX=4577 GN=M17 PE=2 SV=1	[more]
sp\|Q9XGJ4\|GGM13_GNEGN	1.1e-36	49.12	MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1	[more]
sp\|Q8RYD9\|TT16_ARATH	1.6e-35	47.02	Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana OX=3702 GN=TT16 PE=1 SV=1	[more]

BLAST of MELO3C007017.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYU5\|A0A1S3AYU5_CUCME	4.3e-75	100.00	MADS-box protein FBP24 OS=Cucumis melo OX=3656 GN=LOC103484259 PE=4 SV=1	[more]
tr\|A0A218XMX8\|A0A218XMX8_PUNGR	1.6e-48	60.69	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr011127 PE=4 SV=1	[more]
tr\|A0A2I0HIM3\|A0A2I0HIM3_PUNGR	1.6e-48	60.69	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_048070 PE=4 SV=1	[more]
tr\|A0A251PJ11\|A0A251PJ11_PRUPE	1.5e-46	57.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G113500 PE=4 SV=1	[more]
tr\|A0A2P6Q787\|A0A2P6Q787_ROSCH	1.5e-46	58.48	Putative transcription factor MADS-MIKC family OS=Rosa chinensis OX=74649 GN=Rch...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0048316	seed development
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR031050	TT16-like
IPR002487	TF_Kbox
IPR036879	TF_MADSbox_sf
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:2000029	regulation of proanthocyanidin biosynthetic process
biological_process	GO:0080155	regulation of double fertilization forming a zygote and endosperm
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0048481	plant ovule development
biological_process	GO:0044702	single organism reproductive process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0048316	seed development
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007017.2.1	MELO3C007017.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	COILS	Coil	Coil	coord: 124..161
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..166
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 71.89 coord: 3..23 score: 65.43 coord: 38..59 score: 58.75
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.5E-39 score: 147.4
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.1E-25 score: 88.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.076
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 13..76 e-value: 1.9E-27 score: 96.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 2..88
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..164 e-value: 3.7E-11 score: 43.0
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..168 score: 8.939
IPR031050	Protein TRANSPARENT TESTA 16-like	PANTHER	PTHR11945:SF257	SUBFAMILY NOT NAMED	coord: 1..166
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..72 e-value: 3.26189E-40 score: 131.52

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007017.2	Csa6G526550	Cucumber (Chinese Long) v2	cumedB486
MELO3C007017.2	CSPI06G37450	Wild cucumber (PI 183967)	cpimedB496
MELO3C007017.2	CmaCh07G000200	Cucurbita maxima (Rimu)	cmamedB897
MELO3C007017.2	CmaCh03G014930	Cucurbita maxima (Rimu)	cmamedB704
MELO3C007017.2	CmoCh07G000240	Cucurbita moschata (Rifu)	cmomedB886
MELO3C007017.2	CmoCh03G014950	Cucurbita moschata (Rifu)	cmomedB695
MELO3C007017.2	Lsi01G000270	Bottle gourd (USVL1VR-Ls)	lsimedB156
MELO3C007017.2	Cp4.1LG19g05350	Cucurbita pepo (Zucchini)	cpemedB540
MELO3C007017.2	Cp4.1LG10g06750	Cucurbita pepo (Zucchini)	cpemedB081
MELO3C007017.2	CsGy6G036830	Cucumber (Gy14) v2	cgybmedB442
MELO3C007017.2	Cla009883	Watermelon (97103) v1	medwmB561
MELO3C007017.2	ClCG01G025680	Watermelon (Charleston Gray)	medwcgB510
MELO3C007017.2	Cla97C01G025830	Watermelon (97103) v2	medwmbB507
MELO3C007017.2	Bhi03G000210	Wax gourd	medwgoB657
MELO3C007017.2	Carg24612	Silver-seed gourd	carmedB1054
MELO3C007017.2	Carg14933	Silver-seed gourd	carmedB0736
MELO3C007017.2	CsaV3_6G052910	Cucumber (Chinese Long) v3	cucmedB508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007017.2	Cucumber (Gy14) v1	cgymedB025