MELO3C006966 (gene) Melon (DHL92) v3.5.1

NameMELO3C006966
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc transporter ZitB
Locationchr6 : 7778981 .. 7779352 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACCCGATCTAGATCAAGATTGTTTGGCATATGGATTGGATCTCTCACGGAGTCATCAACTCCACTTAGGCCTTCGGCCAATCTCATTCGTCCTTCTGGCGAAGTCATTCAAATGAGGTCTCTTGCCTCTCCTTCATCCAATATGGAGTCTTCTACTCCTCCTCCTACAACTTATTCACAGGCTGTCACTCCCGATAAACGATTCGTACCCAGACCCGAGTTCAAAACTTACTTTAAAAAATCAATTGAGGTCTACTATCCTACCATAGAACTCGAATACCAAAATCTTACTTTAGAAGAGAGTACAGTTTCAAAAATCTTTCCTAAGGGCTTCAATTTCCTTCCAGAGAAAACCTCAACAAAATAA

mRNA sequence

ATGGTAACCCGATCTAGATCAAGATTGTTTGGCATATGGATTGGATCTCTCACGGAGTCATCAACTCCACTTAGGCCTTCGGCCAATCTCATTCGTCCTTCTGGCGAAGTCATTCAAATGAGGTCTCTTGCCTCTCCTTCATCCAATATGGAGTCTTCTACTCCTCCTCCTACAACTTATTCACAGGCTGTCACTCCCGATAAACGATTCGTACCCAGACCCGAGTTCAAAACTTACTTTAAAAAATCAATTGAGGTCTACTATCCTACCATAGAACTCGAATACCAAAATCTTACTTTAGAAGAGAGTACAGTTTCAAAAATCTTTCCTAAGGGCTTCAATTTCCTTCCAGAGAAAACCTCAACAAAATAA

Coding sequence (CDS)

ATGGTAACCCGATCTAGATCAAGATTGTTTGGCATATGGATTGGATCTCTCACGGAGTCATCAACTCCACTTAGGCCTTCGGCCAATCTCATTCGTCCTTCTGGCGAAGTCATTCAAATGAGGTCTCTTGCCTCTCCTTCATCCAATATGGAGTCTTCTACTCCTCCTCCTACAACTTATTCACAGGCTGTCACTCCCGATAAACGATTCGTACCCAGACCCGAGTTCAAAACTTACTTTAAAAAATCAATTGAGGTCTACTATCCTACCATAGAACTCGAATACCAAAATCTTACTTTAGAAGAGAGTACAGTTTCAAAAATCTTTCCTAAGGGCTTCAATTTCCTTCCAGAGAAAACCTCAACAAAATAA

Protein sequence

MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYSQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLEESTVSKIFPKGFNFLPEKTSTK*
BLAST of MELO3C006966 vs. TrEMBL
Match: E5GCE6_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 96/123 (78.05%), Postives = 100/123 (81.30%), Query Frame = 1

Query: 1   MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTY 60
           +VTRSRSRL  IWIGS TESSTP RPS NLIRPSG VIQMR  ASPSSN ESST PPTTY
Sbjct: 46  IVTRSRSRLSSIWIGSPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESST-PPTTY 105

Query: 61  SQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLEESTVSKIFPKGFNFLPEKT 120
           SQAVT DKRFVPRPE K+YF+KSI VY P IE EYQ+LTLEE  VSKIFPK FNFLPE  
Sbjct: 106 SQAVTLDKRFVPRPEIKSYFQKSIVVYDPIIEPEYQSLTLEE-MVSKIFPKDFNFLPEDL 165

Query: 121 STK 124
             K
Sbjct: 166 KKK 166

BLAST of MELO3C006966 vs. TrEMBL
Match: A0A0A0K595_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G361530 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-09
Identity = 42/61 (68.85%), Postives = 45/61 (73.77%), Query Frame = 1

Query: 2   VTRSRSRLFGIWIG-SLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTY 61
           VT SR+R   I IG + TESSTP RPS NLIRPSGEVIQ R  AS  SN +SS PPPTTY
Sbjct: 49  VTISRARSSDIQIGYNSTESSTPPRPSTNLIRPSGEVIQTRPSASSLSNRDSS-PPPTTY 108

BLAST of MELO3C006966 vs. NCBI nr
Match: gi|307136323|gb|ADN34145.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 174.1 bits (440), Expect = 1.5e-40
Identity = 96/123 (78.05%), Postives = 100/123 (81.30%), Query Frame = 1

Query: 1   MVTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTY 60
           +VTRSRSRL  IWIGS TESSTP RPS NLIRPSG VIQMR  ASPSSN ESST PPTTY
Sbjct: 46  IVTRSRSRLSSIWIGSPTESSTPPRPSVNLIRPSGGVIQMRPPASPSSNRESST-PPTTY 105

Query: 61  SQAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLEESTVSKIFPKGFNFLPEKT 120
           SQAVT DKRFVPRPE K+YF+KSI VY P IE EYQ+LTLEE  VSKIFPK FNFLPE  
Sbjct: 106 SQAVTLDKRFVPRPEIKSYFQKSIVVYDPIIEPEYQSLTLEE-MVSKIFPKDFNFLPEDL 165

Query: 121 STK 124
             K
Sbjct: 166 KKK 166

BLAST of MELO3C006966 vs. NCBI nr
Match: gi|659098578|ref|XP_008450208.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-27
Identity = 74/110 (67.27%), Postives = 83/110 (75.45%), Query Frame = 1

Query: 2   VTRSRSRLFGIWIGSLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTYS 61
           +TRSRSR  GI IGS TESSTP RPSANLIR S  V+QMR  ASPSSN ESST PPTTYS
Sbjct: 47  ITRSRSRSSGIRIGSPTESSTPPRPSANLIRLSDGVVQMRPHASPSSNRESST-PPTTYS 106

Query: 62  QAVTPDKRFVPRPEFKTYFKKSIEVYYPTIELEYQNLTLEESTVSKIFPK 112
             VTPDKRFVPRP+ K+YF+KSI VY P IE +YQ  TL ++T    F +
Sbjct: 107 HTVTPDKRFVPRPKIKSYFQKSIVVYDPIIEPKYQ--TLAQATTDADFQR 153

BLAST of MELO3C006966 vs. NCBI nr
Match: gi|700189415|gb|KGN44648.1| (hypothetical protein Csa_7G361530 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 6.9e-09
Identity = 42/61 (68.85%), Postives = 45/61 (73.77%), Query Frame = 1

Query: 2   VTRSRSRLFGIWIG-SLTESSTPLRPSANLIRPSGEVIQMRSLASPSSNMESSTPPPTTY 61
           VT SR+R   I IG + TESSTP RPS NLIRPSGEVIQ R  AS  SN +SS PPPTTY
Sbjct: 49  VTISRARSSDIQIGYNSTESSTPPRPSTNLIRPSGEVIQTRPSASSLSNRDSS-PPPTTY 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GCE6_CUCME1.1e-4078.05Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K595_CUCSA4.8e-0968.85Uncharacterized protein OS=Cucumis sativus GN=Csa_7G361530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307136323|gb|ADN34145.1|1.5e-4078.05hypothetical protein [Cucumis melo subsp. melo][more]
gi|659098578|ref|XP_008450208.1|1.5e-2767.27PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|700189415|gb|KGN44648.1|6.9e-0968.85hypothetical protein Csa_7G361530 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006966T1MELO3C006966T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006966Silver-seed gourdcarmeB0498
MELO3C006966Silver-seed gourdcarmeB0513
MELO3C006966Silver-seed gourdcarmeB0546
MELO3C006966Silver-seed gourdcarmeB0966
MELO3C006966Cucumber (Chinese Long) v3cucmeB239
MELO3C006966Cucumber (Chinese Long) v3cucmeB256
MELO3C006966Cucumber (Chinese Long) v3cucmeB415
MELO3C006966Cucumber (Chinese Long) v3cucmeB416
MELO3C006966Watermelon (97103) v2mewmbB425
MELO3C006966Watermelon (97103) v2mewmbB434
MELO3C006966Watermelon (97103) v2mewmbB437
MELO3C006966Wax gourdmewgoB517
MELO3C006966Wax gourdmewgoB530
MELO3C006966Melon (DHL92) v3.5.1memeB016
MELO3C006966Melon (DHL92) v3.5.1memeB150
MELO3C006966Cucumber (Gy14) v1cgymeB342
MELO3C006966Cucumber (Gy14) v1cgymeB368
MELO3C006966Cucumber (Gy14) v1cgymeB438
MELO3C006966Cucumber (Gy14) v1cgymeB497
MELO3C006966Cucurbita maxima (Rimu)cmameB296
MELO3C006966Cucurbita maxima (Rimu)cmameB375
MELO3C006966Cucurbita maxima (Rimu)cmameB579
MELO3C006966Cucurbita moschata (Rifu)cmomeB289
MELO3C006966Cucurbita moschata (Rifu)cmomeB368
MELO3C006966Cucurbita moschata (Rifu)cmomeB567
MELO3C006966Wild cucumber (PI 183967)cpimeB246
MELO3C006966Wild cucumber (PI 183967)cpimeB249
MELO3C006966Wild cucumber (PI 183967)cpimeB404
MELO3C006966Cucumber (Chinese Long) v2cumeB250
MELO3C006966Cucumber (Chinese Long) v2cumeB254
MELO3C006966Cucumber (Chinese Long) v2cumeB406
MELO3C006966Watermelon (Charleston Gray)mewcgB423
MELO3C006966Watermelon (Charleston Gray)mewcgB427
MELO3C006966Watermelon (Charleston Gray)mewcgB433
MELO3C006966Watermelon (97103) v1mewmB461
MELO3C006966Watermelon (97103) v1mewmB470
MELO3C006966Watermelon (97103) v1mewmB482
MELO3C006966Cucurbita pepo (Zucchini)cpemeB043
MELO3C006966Cucurbita pepo (Zucchini)cpemeB190
MELO3C006966Cucurbita pepo (Zucchini)cpemeB701
MELO3C006966Bottle gourd (USVL1VR-Ls)lsimeB035
MELO3C006966Bottle gourd (USVL1VR-Ls)lsimeB368
MELO3C006966Bottle gourd (USVL1VR-Ls)lsimeB375
MELO3C006966Bottle gourd (USVL1VR-Ls)lsimeB379
MELO3C006966Cucumber (Gy14) v2cgybmeB203
MELO3C006966Cucumber (Gy14) v2cgybmeB218
MELO3C006966Cucumber (Gy14) v2cgybmeB353
MELO3C006966Cucumber (Gy14) v2cgybmeB354