MELO3C006962 (gene) Melon (DHL92) v3.5.1

NameMELO3C006962
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionWD repeat-containing protein 91 like
Locationchr6 : 7738194 .. 7739598 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGAAGAGAATGCTACTTCATCAAATGATGCTCAGGAGACTTGTCCCCCTCCAACTACACAAGTTGGGGAAACACAACTGGCTCGAGATGGGATTTTAGCTGGCTCTGACAAGTATACAGCTTCAAATGAAGATTCAAGTTCTTTGTTAACTAGTTGCTCAGGAGACGGTGAAGTTGGTGATTCTAGTCATAGTTGTGAAGATGGTTGCCAAATGGGTCTGTAACCCTACTTTAGAGTACTTTATTTCTTCTATTGACCAAGGTTTTTTGACGATTAGATAAAGTATTATTACTAGAAAATAAATGCAAAGTGCGCATTATATTATGAAAATAAAGGTTCAATTGATCTCGTTTCAAAATAGTTAAACTCCTAACTAATGAAAGTGATAATTTCTTTTATCCACATATTTTCAATATTTGATTATGTTGATTCATAAAATAGTTAAAAGTGATAATAAAAATATGATAACCGGGGATATTCTAACCTTGCAGTAACTTCCTGAAATTATTGTAAAATCCACTGGTGGTTAGGGATGGGGTGAATCCTCGACTCTAATGCTATAATTTCATGAAGCAATTAGTTTTTCATTTTATTGCTAGTAATAACTTACATTTATCAAGGAAGAAACCATGCACTTCTGTATCAAATAGAAAAAAGTAACCGTTACGACTGATTCTAAAATAATTTTATGCAAGATATATTTTCCATGTTCACAATATTTTAATAGCCCCCTAGTGACTAAAGTATATTGTCGAAGAAGAATTGGGAGAGGAATACGTAAGTAGTATTTATGTAACAGGTGAGTGGGACCCAGACTTATTCGTTATTGACTTACTTGAGGGGATGGGGTTATAATGAGAGATTGATTTTGTTGGAGATACCTTTTCAGTCATTTTGTGGTTTGTTCTCCAAGTGAGACTTGGGAAAAGCAGTGAGCTCTTAGGCTATTCTCTTGACACAAATAAAATTGGTTTCTATCGATCTTTGAGCGTCTTTTTCCTCTTCTTTTCTTTTCATAAGAAGGATCACATTTGTATGCATAATGTGCCAGTGAATAGCGGAGAAGTCCATGTACAAGAAGACTTTCCTGAAGTGAAAGTAGAATTTCAGGTAATACACTACTAAAATTTCATATTGGCATTCAGATTAAGTTTAACCTATAACTTATATCTTTACTGTTCTGTTTATTACACTTGTTCTCATTAGCTATGTGCATGTGTTTCTCTATCTCACCCTGCAATAGAGTTTCTTACTCATATTACTGTGGTAAATAGGAGACATTTTTGGGCCACACAAGTCCAATCAGCCGTTGCCGTTTTTCTGCATCCGGAAACAATGTAGCAAGTGCTTCTTTGGATGGTACAGTCAGGTACAATACTCATGGTATTCGAGGTGAATAA

mRNA sequence

ATGCACGAAGAGAATGCTACTTCATCAAATGATGCTCAGGAGACTTGTCCCCCTCCAACTACACAAGTTGGGGAAACACAACTGGCTCGAGATGGGATTTTAGCTGGCTCTGACAAGTATACAGCTTCAAATGAAGATTCAAGTTCTTTGTTAACTAGTTGCTCAGGAGACGGTGAAGTTGGTGATTCTAGTCATAGTTGTGAAGATGGTTGCCAAATGGTGAATAGCGGAGAAGTCCATGTACAAGAAGACTTTCCTGAAGTGAAAGTAGAATTTCAGGAGACATTTTTGGGCCACACAAGTCCAATCAGCCGTTGCCGTTTTTCTGCATCCGGAAACAATGTAGCAAGTGCTTCTTTGGATGGTACAGTCAGGTACAATACTCATGGTATTCGAGGTGAATAA

Coding sequence (CDS)

ATGCACGAAGAGAATGCTACTTCATCAAATGATGCTCAGGAGACTTGTCCCCCTCCAACTACACAAGTTGGGGAAACACAACTGGCTCGAGATGGGATTTTAGCTGGCTCTGACAAGTATACAGCTTCAAATGAAGATTCAAGTTCTTTGTTAACTAGTTGCTCAGGAGACGGTGAAGTTGGTGATTCTAGTCATAGTTGTGAAGATGGTTGCCAAATGGTGAATAGCGGAGAAGTCCATGTACAAGAAGACTTTCCTGAAGTGAAAGTAGAATTTCAGGAGACATTTTTGGGCCACACAAGTCCAATCAGCCGTTGCCGTTTTTCTGCATCCGGAAACAATGTAGCAAGTGCTTCTTTGGATGGTACAGTCAGGTACAATACTCATGGTATTCGAGGTGAATAA

Protein sequence

MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASLDGTVRYNTHGIRGE*
BLAST of MELO3C006962 vs. TrEMBL
Match: A0A0A0L7V0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G360140 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.2e-63
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 60
           MHEENATSSNDA ETCPPPTTQVGETQLARDG+LAGSDKY ASNEDSSSLLTS SGDGEV
Sbjct: 228 MHEENATSSNDALETCPPPTTQVGETQLARDGVLAGSDKYIASNEDSSSLLTSRSGDGEV 287

Query: 61  GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 120
           GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL
Sbjct: 288 GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 347

Query: 121 DGTVRYNTH 130
           DGTVR  T+
Sbjct: 348 DGTVRIWTY 356

BLAST of MELO3C006962 vs. TrEMBL
Match: M5X3T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003681mg PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.8e-25
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSD------KYTASNEDSSSLLTSC 60
           ++EEN   S + +ETCPP T Q+ E ++ +D I+AG          + S+ + SS  +  
Sbjct: 239 VYEENHLISKNTRETCPPATFQIREAEVNQDWIVAGPAGIRPEINISKSDPNLSSQSSLR 298

Query: 61  SGDGEVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNN 120
           + DG   D+ H  +DG    N  E HV EDFPEVKV+FQETFLGHTSPI+RCRFSASGNN
Sbjct: 299 AEDGGTADTIHLFQDGPYNENGRESHV-EDFPEVKVDFQETFLGHTSPITRCRFSASGNN 358

Query: 121 VASASLDGTVRYNTH 130
           +ASAS DGTVR  T+
Sbjct: 359 IASASEDGTVRIWTY 372

BLAST of MELO3C006962 vs. TrEMBL
Match: W9SGR2_9ROSA (WD repeat-containing protein 91 OS=Morus notabilis GN=L484_014198 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.2e-22
Identity = 69/133 (51.88%), Postives = 84/133 (63.16%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGS--DKYTASNEDSSSLLTSCSG-- 60
           ++EEN   S D +E C   T QVGET+L R+  +A S  ++   S   S   L+S S   
Sbjct: 242 VYEENLRISKDTREICSSDTLQVGETELNREWAVAASVGNQVDISMSKSGYSLSSSSSPR 301

Query: 61  DGEVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVA 120
           DG + DSS    D     N  E HV+E   EVKV+FQETFLGHTSPISRC FSASGNN+A
Sbjct: 302 DGGISDSSPLL-DSSHDENGRESHVEE-LHEVKVDFQETFLGHTSPISRCHFSASGNNIA 361

Query: 121 SASLDGTVRYNTH 130
           SAS+DGTVR  T+
Sbjct: 362 SASVDGTVRIWTY 372

BLAST of MELO3C006962 vs. TrEMBL
Match: A0A058ZXG3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00307 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-21
Identity = 65/131 (49.62%), Postives = 81/131 (61.83%), Query Frame = 1

Query: 3   EENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASN--EDSSSLLTSCS--GDG 62
           +EN  SS D Q+T    T   G+  LA+D + A   K    +    S+ + TS S  GD 
Sbjct: 241 DENIVSSQDNQDTHDDATRNPGDRVLAQDLVDASKAKVNLESLARPSAHVTTSLSVCGDN 300

Query: 63  EVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASA 122
             G SS   +DG       EV  +E+FPEV V+FQETFLGHTSPI+RCRFSASGNN+ASA
Sbjct: 301 GAGGSSLMLQDGT-FETGREVEGEEEFPEVNVDFQETFLGHTSPITRCRFSASGNNIASA 360

Query: 123 SLDGTVRYNTH 130
           S+DGTVR  T+
Sbjct: 361 SMDGTVRIWTY 370

BLAST of MELO3C006962 vs. TrEMBL
Match: K7LKZ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-20
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 60
           + EE A  S D+ E  P    QVG+T++++D +  G           S L+ S SG+   
Sbjct: 232 LREETARVSKDSSELFPTGIPQVGQTEISQDSVAGGLGNIR------SELIGSTSGNDST 291

Query: 61  GDSSHS------CEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNN 120
              S+        ++     N+GEV  +EDF EVKVE+QETFLGHT PISRC FSASGNN
Sbjct: 292 TFLSNDRMRNGRADNATLKDNNGEVFGEEDFAEVKVEYQETFLGHTGPISRCCFSASGNN 351

Query: 121 VASASLDGTVRYNTH 130
           +ASASLDGTVR  T+
Sbjct: 352 IASASLDGTVRIWTY 360

BLAST of MELO3C006962 vs. NCBI nr
Match: gi|659077813|ref|XP_008439400.1| (PREDICTED: WD repeat-containing protein 91 homolog [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-65
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 60
           MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV
Sbjct: 269 MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 328

Query: 61  GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 120
           GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL
Sbjct: 329 GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 388

Query: 121 DGTVRYNTH 130
           DGTVR  T+
Sbjct: 389 DGTVRIWTY 397

BLAST of MELO3C006962 vs. NCBI nr
Match: gi|778688616|ref|XP_004149462.2| (PREDICTED: WD repeat-containing protein 91-like [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-62
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 60
           MHEENATSSNDA ETCPPPTTQVGETQLARDG+LAGSDKY ASNEDSSSLLTS SGDGEV
Sbjct: 283 MHEENATSSNDALETCPPPTTQVGETQLARDGVLAGSDKYIASNEDSSSLLTSRSGDGEV 342

Query: 61  GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 120
           GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL
Sbjct: 343 GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 402

Query: 121 DGTVRYNTH 130
           DGTVR  T+
Sbjct: 403 DGTVRIWTY 411

BLAST of MELO3C006962 vs. NCBI nr
Match: gi|700202745|gb|KGN57878.1| (hypothetical protein Csa_3G360140 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-62
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGSDKYTASNEDSSSLLTSCSGDGEV 60
           MHEENATSSNDA ETCPPPTTQVGETQLARDG+LAGSDKY ASNEDSSSLLTS SGDGEV
Sbjct: 228 MHEENATSSNDALETCPPPTTQVGETQLARDGVLAGSDKYIASNEDSSSLLTSRSGDGEV 287

Query: 61  GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 120
           GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL
Sbjct: 288 GDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASL 347

Query: 121 DGTVRYNTH 130
           DGTVR  T+
Sbjct: 348 DGTVRIWTY 356

BLAST of MELO3C006962 vs. NCBI nr
Match: gi|658057591|ref|XP_008364574.1| (PREDICTED: WD repeat-containing protein 91 homolog [Malus domestica])

HSP 1 Score: 129.0 bits (323), Expect = 6.1e-27
Identity = 72/135 (53.33%), Postives = 87/135 (64.44%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGS----DKYTASNEDS--SSLLTSC 60
           +HE+N   S D QETCPP T Q+GE ++  D ++AG+     ++  S  D   SS  +  
Sbjct: 251 VHEQNRIISKDTQETCPPDTFQIGEAEVDPDWVVAGNMGSRPEFNISKSDPNLSSQSSPR 310

Query: 61  SGDGEVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNN 120
             DG   D     EDG    N  E HV EDFPEVKV+FQETFLGHTSPI+RCRFSASGNN
Sbjct: 311 MRDGGTADGIQLFEDGTYNENGRESHV-EDFPEVKVDFQETFLGHTSPITRCRFSASGNN 370

Query: 121 VASASLDGTVRYNTH 130
           +ASAS DGTVR  T+
Sbjct: 371 IASASEDGTVRIWTY 384

BLAST of MELO3C006962 vs. NCBI nr
Match: gi|657946015|ref|XP_008382572.1| (PREDICTED: WD repeat-containing protein 91 homolog [Malus domestica])

HSP 1 Score: 129.0 bits (323), Expect = 6.1e-27
Identity = 72/135 (53.33%), Postives = 87/135 (64.44%), Query Frame = 1

Query: 1   MHEENATSSNDAQETCPPPTTQVGETQLARDGILAGS----DKYTASNEDS--SSLLTSC 60
           +HE+N   S D QETCPP T Q+GE ++  D ++AG+     ++  S  D   SS  +  
Sbjct: 251 VHEQNRIISKDTQETCPPDTFQIGEAEVDPDWVVAGNMGSRPEFNISKSDPNLSSQSSPR 310

Query: 61  SGDGEVGDSSHSCEDGCQMVNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNN 120
             DG   D     EDG    N  E HV EDFPEVKV+FQETFLGHTSPI+RCRFSASGNN
Sbjct: 311 MRDGGTADGIQLFEDGTYNENGRESHV-EDFPEVKVDFQETFLGHTSPITRCRFSASGNN 370

Query: 121 VASASLDGTVRYNTH 130
           +ASAS DGTVR  T+
Sbjct: 371 IASASEDGTVRIWTY 384

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7V0_CUCSA8.2e-6394.57Uncharacterized protein OS=Cucumis sativus GN=Csa_3G360140 PE=4 SV=1[more]
M5X3T5_PRUPE1.8e-2551.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003681mg PE=4 SV=1[more]
W9SGR2_9ROSA9.2e-2251.88WD repeat-containing protein 91 OS=Morus notabilis GN=L484_014198 PE=4 SV=1[more]
A0A058ZXG3_EUCGR6.0e-2149.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00307 PE=4 SV=1[more]
K7LKZ0_SOYBN2.3e-2045.93Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659077813|ref|XP_008439400.1|1.1e-6597.67PREDICTED: WD repeat-containing protein 91 homolog [Cucumis melo][more]
gi|778688616|ref|XP_004149462.2|1.2e-6294.57PREDICTED: WD repeat-containing protein 91-like [Cucumis sativus][more]
gi|700202745|gb|KGN57878.1|1.2e-6294.57hypothetical protein Csa_3G360140 [Cucumis sativus][more]
gi|658057591|ref|XP_008364574.1|6.1e-2753.33PREDICTED: WD repeat-containing protein 91 homolog [Malus domestica][more]
gi|657946015|ref|XP_008382572.1|6.1e-2753.33PREDICTED: WD repeat-containing protein 91 homolog [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015976 carbon utilization
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0010431 seed maturation
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0030955 potassium ion binding
molecular_function GO:0004743 pyruvate kinase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU66179melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006962T1MELO3C006962T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU66179MU66179transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 89..128
score: 2.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 96..125
score:
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 91..125
score: 8.
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 91..125
score: 8.4
NoneNo IPR availablePANTHERPTHR13083UNCHARACTERIZEDcoord: 69..125
score: 2.9
NoneNo IPR availablePANTHERPTHR13083:SF3WD REPEAT-CONTAINING PROTEIN 91coord: 69..125
score: 2.9

The following gene(s) are paralogous to this gene:

None