MELO3C006906.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006906.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description50S ribosomal protein L2, chloroplastic
Locationchr06 : 7133799 .. 7134200 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

mRNA sequence

ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

Coding sequence (CDS)

ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

Protein sequence

MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPALEEVEKGINIVRI
Homology
[Close]
BLAST of MELO3C006906.2 vs. NCBI nr
Match: AFU96017.1 (Rpl2, partial (chloroplast) [Balanops pachyphylla])

HSP 1 Score: 217.2 bits (552), Expect = 3.3e-53
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 139 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 198

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGRVPIGRKKPAT WGYPA
Sbjct: 199 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRVPIGRKKPATPWGYPA 258

Query: 121 L 122
           L
Sbjct: 259 L 259

[Close]
BLAST of MELO3C006906.2 vs. NCBI nr
Match: YP_009263072.1 (ribosomal protein L2 (chloroplast) [Angelesia splendens] >YP_009263093.1 ribosomal protein L2 (chloroplast) [Angelesia splendens] >ANJ17169.1 ribosomal protein L2 (chloroplast) [Angelesia splendens] >ANJ17170.1 ribosomal protein L2 (chloroplast) [Angelesia splendens])

HSP 1 Score: 216.5 bits (550), Expect = 5.6e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATFKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. NCBI nr
Match: YP_009263176.1 (ribosomal protein L2 (chloroplast) [Atuna racemosa] >ANJ17278.1 ribosomal protein L2 (chloroplast) [Atuna racemosa])

HSP 1 Score: 216.5 bits (550), Expect = 5.6e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQ
Sbjct: 1   MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATFKLPSGEVRLISKNCSATVGQ 60

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 61  VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPA 120

Query: 121 L 122
           L
Sbjct: 121 L 121

[Close]
BLAST of MELO3C006906.2 vs. NCBI nr
Match: YP_004072503.1 (ribosomal protein L2 (chloroplast) [Corynocarpus laevigatus] >YP_004072523.1 ribosomal protein L2 (chloroplast) [Corynocarpus laevigatus] >ADO60351.1 ribosomal protein L2 (chloroplast) [Corynocarpus laevigatus] >ADO60371.1 ribosomal protein L2 (chloroplast) [Corynocarpus laevigatus] >AEK71459.1 ribosomal protein L2 (plastid) [Coriaria nepalensis])

HSP 1 Score: 215.7 bits (548), Expect = 9.5e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. NCBI nr
Match: AEK71791.1 (ribosomal protein L2 (plastid) [Malesherbia linearifolia])

HSP 1 Score: 215.7 bits (548), Expect = 9.5e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 136 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 195

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 196 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 255

Query: 121 L 122
           L
Sbjct: 256 L 256

[Close]
BLAST of MELO3C006906.2 vs. TAIR10
Match: ATCG00830.1 (ribosomal protein L2)

HSP 1 Score: 211.5 bits (537), Expect = 3.3e-55
Identity = 101/121 (83.47%), Postives = 105/121 (86.78%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. TAIR10
Match: ATCG01310.1 (ribosomal protein L2)

HSP 1 Score: 211.5 bits (537), Expect = 3.3e-55
Identity = 101/121 (83.47%), Postives = 105/121 (86.78%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. TAIR10
Match: AT2G44065.1 (Ribosomal protein L2 family)

HSP 1 Score: 97.8 bits (242), Expect = 5.3e-21
Identity = 51/123 (41.46%), Postives = 66/123 (53.66%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEK-SATFKLPFGEVRLISKNCSVTVG 60
           M +GT IHNIE+  G+G ++ RAAG   K + +  K     KLP G+ + I+  C  T+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 61  QVENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATL---W 120
            V N     K L +AG   WLG    V+ V MNP DHPHGGGEG+      +  T    W
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKXXXSGSRGRTSVSPW 187

[Close]
BLAST of MELO3C006906.2 vs. TAIR10
Match: AT3G51190.1 (Ribosomal protein L2 family)

HSP 1 Score: 74.7 bits (182), Expect = 4.8e-14
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTV 60
           +P G  I N+E+ +G  G LARA+G  AIV     E  +   KLP G  +++   C   +
Sbjct: 108 IPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMI 167

Query: 61  GQVENAGVNQKSLGRAGS---------QCWLGKHLVVKEVVMNPVDHPHGGG 102
           GQV   G  +K L +AG+          CW     VV+ V MNPV+HPHGGG
Sbjct: 168 GQVAGGGRTEKPLLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPHGGG 215

[Close]
BLAST of MELO3C006906.2 vs. TAIR10
Match: AT4G36130.1 (Ribosomal protein L2 family)

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-12
Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTV 60
           +P G  I N+E  +G  G  ARA+G  AIV     +  ++  KLP G  +++   C   +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMI 166

Query: 61  GQVENAGVNQKSLGRAGS---------QCWLGKHLVVKEVVMNPVDHPHGGG 102
           GQV   G  +K + +AG+          CW      V+ V MNPV+HPHGGG
Sbjct: 167 GQVAGGGRTEKPMLKAGNAYHKYRVKRNCW----PKVRGVAMNPVEHPHGGG 214

[Close]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match: sp|Q4VZK5|RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-55
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match: sp|Q14F95|RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-55
Identity = 103/121 (85.12%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match: sp|Q14FB6|RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-55
Identity = 103/121 (85.12%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match: sp|A4GYV2|RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-55
Identity = 103/121 (85.12%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match: sp|A4QJF6|RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.1e-55
Identity = 103/121 (85.12%), Postives = 106/121 (87.60%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. TrEMBL
Match: tr|K4KP98|K4KP98_9ROSI (Rpl2 (Fragment) OS=Balanops pachyphylla OX=1241920 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 139 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 198

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGRVPIGRKKPAT WGYPA
Sbjct: 199 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRVPIGRKKPATPWGYPA 258

Query: 121 L 122
           L
Sbjct: 259 L 259

[Close]
BLAST of MELO3C006906.2 vs. TrEMBL
Match: tr|A0A191VN78|A0A191VN78_9ROSI (50S ribosomal protein L2, chloroplastic OS=Angelesia splendens OX=1856776 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATFKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906.2 vs. TrEMBL
Match: tr|A0A191VNJ5|A0A191VNJ5_9ROSI (Ribosomal protein L2 OS=Atuna racemosa OX=82151 GN=rpl2 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSATFKLP GEVRLISKNCS TVGQ
Sbjct: 1   MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATFKLPSGEVRLISKNCSATVGQ 60

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 61  VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPA 120

Query: 121 L 122
           L
Sbjct: 121 L 121

[Close]
BLAST of MELO3C006906.2 vs. TrEMBL
Match: tr|A0A286KTY1|A0A286KTY1_9ROSI (50S ribosomal protein L2, chloroplastic OS=Gynostemma cardiospermum OX=1739658 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.3e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906.2 vs. TrEMBL
Match: tr|A0A2L1IPH0|A0A2L1IPH0_BYRCR (50S ribosomal protein L2, chloroplastic OS=Byrsonima crassifolia OX=4270 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.3e-53
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 136 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 195

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 196 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 255

Query: 121 L 122
           L
Sbjct: 256 L 256

The following BLAST results are available for this feature:
BLAST of MELO3C006906.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AFU96017.13.3e-5386.78Rpl2, partial (chloroplast) [Balanops pachyphylla][more]
YP_009263072.15.6e-5385.95ribosomal protein L2 (chloroplast) [Angelesia splendens] >YP_009263093.1 ribosom... [more]
YP_009263176.15.6e-5385.95ribosomal protein L2 (chloroplast) [Atuna racemosa] >ANJ17278.1 ribosomal protei... [more]
YP_004072503.19.5e-5385.95ribosomal protein L2 (chloroplast) [Corynocarpus laevigatus] >YP_004072523.1 rib... [more]
AEK71791.19.5e-5385.95ribosomal protein L2 (plastid) [Malesherbia linearifolia][more]
BLAST of MELO3C006906.2 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00830.13.3e-5583.47ribosomal protein L2[more]
ATCG01310.13.3e-5583.47ribosomal protein L2[more]
AT2G44065.15.3e-2141.46Ribosomal protein L2 family[more]
AT3G51190.14.8e-1439.29Ribosomal protein L2 family[more]
AT4G36130.14.5e-1235.71Ribosomal protein L2 family[more]
BLAST of MELO3C006906.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZK5|RK2_CUCSA3.1e-5585.9550S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
sp|Q14F95|RK2A_POPAL6.9e-5585.1250S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=... [more]
sp|Q14FB6|RK2B_POPAL6.9e-5585.1250S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=... [more]
sp|A4GYV2|RK2_POPTR6.9e-5585.1250S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A... [more]
sp|A4QJF6|RK2_AETCO9.1e-5585.1250S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r... [more]
BLAST of MELO3C006906.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|K4KP98|K4KP98_9ROSI2.2e-5386.78Rpl2 (Fragment) OS=Balanops pachyphylla OX=1241920 GN=rpl2 PE=3 SV=1[more]
tr|A0A191VN78|A0A191VN78_9ROSI3.7e-5385.9550S ribosomal protein L2, chloroplastic OS=Angelesia splendens OX=1856776 GN=rpl... [more]
tr|A0A191VNJ5|A0A191VNJ5_9ROSI3.7e-5385.95Ribosomal protein L2 OS=Atuna racemosa OX=82151 GN=rpl2 PE=4 SV=1[more]
tr|A0A286KTY1|A0A286KTY1_9ROSI6.3e-5385.9550S ribosomal protein L2, chloroplastic OS=Gynostemma cardiospermum OX=1739658 G... [more]
tr|A0A2L1IPH0|A0A2L1IPH0_BYRCR6.3e-5385.9550S ribosomal protein L2, chloroplastic OS=Byrsonima crassifolia OX=4270 GN=rpl2... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR002171Ribosomal_L2
IPR014726Ribosomal_L2_dom3
IPR014722Rib_L2_dom2
IPR022669Ribosomal_L2_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006906.2.1MELO3C006906.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 1..119
e-value: 1.4E-44
score: 164.0
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 1..117
e-value: 2.6E-39
score: 134.2
IPR014722Ribosomal protein L2, domain 2GENE3DG3DSA:2.30.30.30coord: 1..62
e-value: 9.3E-22
score: 78.6
IPR014726Ribosomal protein L2, domain 3GENE3DG3DSA:4.10.950.10coord: 63..129
e-value: 5.4E-20
score: 73.3
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..121
NoneNo IPR availablePANTHERPTHR13691:SF25SUBFAMILY NOT NAMEDcoord: 1..121
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILYSSF50104Translation proteins SH3-like domaincoord: 1..122

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006906.2Silver-seed gourdcarmedB0722
MELO3C006906.2Silver-seed gourdcarmedB0743
MELO3C006906.2Silver-seed gourdcarmedB0975
MELO3C006906.2Cucumber (Chinese Long) v3cucmedB230
MELO3C006906.2Cucumber (Chinese Long) v3cucmedB407
MELO3C006906.2Watermelon (97103) v2medwmbB412
MELO3C006906.2Watermelon (97103) v2medwmbB423
MELO3C006906.2Watermelon (97103) v2medwmbB436
MELO3C006906.2Wax gourdmedwgoB518
MELO3C006906.2Wax gourdmedwgoB543
MELO3C006906.2Cucumber (Gy14) v2cgybmedB201
MELO3C006906.2Cucumber (Gy14) v2cgybmedB353
MELO3C006906.2Cucumber (Gy14) v1cgymedB142
MELO3C006906.2Cucumber (Gy14) v1cgymedB431
MELO3C006906.2Cucumber (Gy14) v1cgymedB496
MELO3C006906.2Cucurbita maxima (Rimu)cmamedB344
MELO3C006906.2Cucurbita maxima (Rimu)cmamedB432
MELO3C006906.2Cucurbita maxima (Rimu)cmamedB661
MELO3C006906.2Cucurbita moschata (Rifu)cmomedB331
MELO3C006906.2Cucurbita moschata (Rifu)cmomedB421
MELO3C006906.2Cucurbita moschata (Rifu)cmomedB649
MELO3C006906.2Cucurbita moschata (Rifu)cmomedB944
MELO3C006906.2Cucurbita pepo (Zucchini)cpemedB050
MELO3C006906.2Cucurbita pepo (Zucchini)cpemedB233
MELO3C006906.2Cucurbita pepo (Zucchini)cpemedB370
MELO3C006906.2Cucurbita pepo (Zucchini)cpemedB831
MELO3C006906.2Cucurbita pepo (Zucchini)cpemedB835
MELO3C006906.2Wild cucumber (PI 183967)cpimedB224
MELO3C006906.2Wild cucumber (PI 183967)cpimedB246
MELO3C006906.2Wild cucumber (PI 183967)cpimedB399
MELO3C006906.2Cucumber (Chinese Long) v2cumedB223
MELO3C006906.2Cucumber (Chinese Long) v2cumedB245
MELO3C006906.2Cucumber (Chinese Long) v2cumedB391
MELO3C006906.2Melon (DHL92) v3.6.1medmedB148
MELO3C006906.2Bottle gourd (USVL1VR-Ls)lsimedB036
MELO3C006906.2Bottle gourd (USVL1VR-Ls)lsimedB397
MELO3C006906.2Watermelon (Charleston Gray)medwcgB408
MELO3C006906.2Watermelon (Charleston Gray)medwcgB416
MELO3C006906.2Watermelon (97103) v1medwmB447
MELO3C006906.2Watermelon (97103) v1medwmB467