MELO3C006906 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006906
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L2
Locationchr6 : 7134840 .. 7135241 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

mRNA sequence

ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

Coding sequence (CDS)

ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTATAGTAAAATGGATTACAAAAGAGGAGAAATCGGCCACATTCAAATTACCTTTTGGGGAGGTTCGTTTGATATCCAAAAATTGCTCAGTAACAGTCGGACAAGTGGAGAATGCAGGGGTTAACCAGAAAAGTTTGGGTAGAGCCGGATCTCAATGTTGGCTAGGTAAGCATCTTGTAGTCAAAGAAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGAAGGGTCCCAATTGGTCGAAAAAAACCCGCAACCCTTTGGGGTTATCCTGCACTCGAAGAAGTAGAAAAAGGAATCAATATAGTGAGAATTTGA

Protein sequence

MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQVENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPALEEVEKGINIVRI*
Homology
[Close]
BLAST of MELO3C006906 vs. Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-54
Identity = 104/121 (85.95%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906 vs. Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.5e-54
Identity = 103/121 (85.12%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.5e-54
Identity = 103/121 (85.12%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906 vs. Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.5e-54
Identity = 103/121 (85.12%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906 vs. Swiss-Prot
Match: RK2_MANES (50S ribosomal protein L2, chloroplastic OS=Manihot esculenta GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.8e-54
Identity = 103/121 (85.12%), Postives = 105/121 (86.78%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 136 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 195

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 196 VGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 255

Query: 121 L 122
           L
Sbjct: 256 L 256

[Close]
BLAST of MELO3C006906 vs. TrEMBL
Match: K4KP98_9ROSI (Rpl2 (Fragment) OS=Balanops pachyphylla GN=rpl2 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.7e-53
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 139 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 198

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGRVPIGRKKPAT WGYPA
Sbjct: 199 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRVPIGRKKPATPWGYPA 258

Query: 121 L 122
           L
Sbjct: 259 L 259

[Close]
BLAST of MELO3C006906 vs. TrEMBL
Match: W8E241_9ROSI (Ribosomal protein L2 OS=Cucumis hystrix GN=rpl2 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. TrEMBL
Match: A0A0S2IHS2_CUCPE (Ribosomal protein L2 OS=Cucurbita pepo subsp. pepo GN=rpl2 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. TrEMBL
Match: A0A109X1F9_GYNPE (50S ribosomal protein L2, chloroplastic OS=Gynostemma pentaphyllum GN=rpl2 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. TrEMBL
Match: A0A0S2IEF7_9ROSI (Ribosomal protein L2 OS=Cucurbita ficifolia GN=rpl2 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. TAIR10
Match: ATCG00830.1 (ATCG00830.1 ribosomal protein L2)

HSP 1 Score: 208.8 bits (530), Expect = 2.1e-54
Identity = 101/121 (83.47%), Postives = 104/121 (85.95%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906 vs. TAIR10
Match: ATCG01310.1 (ATCG01310.1 ribosomal protein L2)

HSP 1 Score: 208.8 bits (530), Expect = 2.1e-54
Identity = 101/121 (83.47%), Postives = 104/121 (85.95%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLG+GGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V N GVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKP T WGYPA
Sbjct: 193 VGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

[Close]
BLAST of MELO3C006906 vs. TAIR10
Match: AT2G44065.1 (AT2G44065.1 Ribosomal protein L2 family)

HSP 1 Score: 94.7 bits (234), Expect = 4.5e-20
Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKS-ATFKLPFGEVRLISKNCSVTVG 60
           M +GT IHNIE+  G+G ++ RAAG   K + +  K     KLP G+ + I+  C  T+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 61  QVENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATL---W 120
            V N     K L +AG   WLG    V+ V MNP DHPHGGGEG+      +  T    W
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187

[Close]
BLAST of MELO3C006906 vs. TAIR10
Match: AT3G51190.1 (AT3G51190.1 Ribosomal protein L2 family)

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 44/112 (39.29%), Postives = 57/112 (50.89%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTV 60
           +P G  I N+E+ +G  G LARA+G  AIV     E  +   KLP G  +++   C   +
Sbjct: 108 IPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMI 167

Query: 61  GQVENAGVNQKSLGRAGS---------QCWLGKHLVVKEVVMNPVDHPHGGG 102
           GQV   G  +K L +AG+          CW     VV+ V MNPV+HPHGGG
Sbjct: 168 GQVAGGGRTEKPLLKAGNAYHKYKAKRNCWP----VVRGVAMNPVEHPHGGG 215

[Close]
BLAST of MELO3C006906 vs. TAIR10
Match: AT4G36130.1 (AT4G36130.1 Ribosomal protein L2 family)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 40/112 (35.71%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAG--AIVKWITKEEKSATFKLPFGEVRLISKNCSVTV 60
           +P G  I N+E  +G  G  ARA+G  AIV     +  ++  KLP G  +++   C   +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMI 166

Query: 61  GQVENAGVNQKSLGRAGS---------QCWLGKHLVVKEVVMNPVDHPHGGG 102
           GQV   G  +K + +AG+          CW      V+ V MNPV+HPHGGG
Sbjct: 167 GQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPK----VRGVAMNPVEHPHGGG 214

[Close]
BLAST of MELO3C006906 vs. NCBI nr
Match: gi|408902749|gb|AFU96017.1| (Rpl2, partial (chloroplast) [Balanops pachyphylla])

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-52
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 139 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 198

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGRVPIGRKKPAT WGYPA
Sbjct: 199 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRVPIGRKKPATPWGYPA 258

Query: 121 L 122
           L
Sbjct: 259 L 259

[Close]
BLAST of MELO3C006906 vs. NCBI nr
Match: gi|1002166170|ref|YP_009236338.1| (ribosomal protein L2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. NCBI nr
Match: gi|952954360|gb|ALO21724.1| (ribosomal protein L2 (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

[Close]
BLAST of MELO3C006906 vs. NCBI nr
Match: gi|317046214|ref|YP_004072503.1| (ribosomal protein L2 [Corynocarpus laevigata])

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 133 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 192

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 193 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 252

Query: 121 L 122
           L
Sbjct: 253 L 253

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BLAST of MELO3C006906 vs. NCBI nr
Match: gi|590000473|ref|YP_009004102.1| (ribosomal protein L2 [Cucumis hystrix])

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-52
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 1 

Query: 1   MPLGTTIHNIEITLGKGGQLARAAGAIVKWITKEEKSATFKLPFGEVRLISKNCSVTVGQ 60
           MPLGT IHNIEITLGKGGQLARAAGA+ K I KE KSAT KLP GEVRLISKNCS TVGQ
Sbjct: 134 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQ 193

Query: 61  VENAGVNQKSLGRAGSQCWLGKHLVVKEVVMNPVDHPHGGGEGRVPIGRKKPATLWGYPA 120
           V NAGVNQKSLGRAGS+CWLGK  VV+ VVMNPVDHPHGGGEGR PIGRKKPAT WGYPA
Sbjct: 194 VGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 253

Query: 121 L 122
           L
Sbjct: 254 L 254

The following BLAST results are available for this feature:
BLAST of MELO3C006906 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RK2_CUCSA2.0e-5485.9550S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1[more]
RK2A_POPAL4.5e-5485.1250S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1[more]
RK2_POPTR4.5e-5485.1250S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV... [more]
RK2B_POPAL4.5e-5485.1250S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1[more]
RK2_MANES5.8e-5485.1250S ribosomal protein L2, chloroplastic OS=Manihot esculenta GN=rpl2-A PE=3 SV=1[more]
BLAST of MELO3C006906 vs. TrEMBL
Match NameE-valueIdentityDescription
K4KP98_9ROSI7.7e-5386.78Rpl2 (Fragment) OS=Balanops pachyphylla GN=rpl2 PE=3 SV=1[more]
W8E241_9ROSI2.2e-5285.95Ribosomal protein L2 OS=Cucumis hystrix GN=rpl2 PE=3 SV=1[more]
A0A0S2IHS2_CUCPE2.2e-5285.95Ribosomal protein L2 OS=Cucurbita pepo subsp. pepo GN=rpl2 PE=3 SV=1[more]
A0A109X1F9_GYNPE2.2e-5285.9550S ribosomal protein L2, chloroplastic OS=Gynostemma pentaphyllum GN=rpl2 PE=3 ... [more]
A0A0S2IEF7_9ROSI2.2e-5285.95Ribosomal protein L2 OS=Cucurbita ficifolia GN=rpl2 PE=3 SV=1[more]
BLAST of MELO3C006906 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00830.12.1e-5483.47ATCG00830.1 ribosomal protein L2[more]
ATCG01310.12.1e-5483.47ATCG01310.1 ribosomal protein L2[more]
AT2G44065.14.5e-2041.46 Ribosomal protein L2 family[more]
AT3G51190.11.4e-1339.29 Ribosomal protein L2 family[more]
AT4G36130.11.3e-1135.71 Ribosomal protein L2 family[more]
BLAST of MELO3C006906 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|408902749|gb|AFU96017.1|1.1e-5286.78Rpl2, partial (chloroplast) [Balanops pachyphylla][more]
gi|1002166170|ref|YP_009236338.1|3.2e-5285.95ribosomal protein L2 (chloroplast) [Gynostemma pentaphyllum][more]
gi|952954360|gb|ALO21724.1|3.2e-5285.95ribosomal protein L2 (plastid) [Cucurbita argyrosperma][more]
gi|317046214|ref|YP_004072503.1|3.2e-5285.95ribosomal protein L2 [Corynocarpus laevigata][more]
gi|590000473|ref|YP_009004102.1|3.2e-5285.95ribosomal protein L2 [Cucumis hystrix][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002171Ribosomal_L2
IPR008991Translation_prot_SH3-like_sf
IPR014722Rib_L2_dom2
IPR014726Ribosomal_L2_dom3
IPR022669Ribosomal_L2_C
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006906T1MELO3C006906T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..121
score: 4.3
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 1..122
score: 5.96
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 1..61
score: 4.9
IPR014726Ribosomal protein L2, domain 3GENE3DG3DSA:4.10.950.10coord: 63..121
score: 3.0
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 1..117
score: 2.7
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 1..119
score: 1.4
NoneNo IPR availablePANTHERPTHR13691:SF1950S RIBOSOMAL PROTEIN L2, CHLOROPLASTICcoord: 1..121
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006906Silver-seed gourdcarmeB0498
MELO3C006906Silver-seed gourdcarmeB0709
MELO3C006906Silver-seed gourdcarmeB0732
MELO3C006906Silver-seed gourdcarmeB0966
MELO3C006906Cucumber (Chinese Long) v3cucmeB236
MELO3C006906Cucumber (Chinese Long) v3cucmeB415
MELO3C006906Watermelon (97103) v2mewmbB424
MELO3C006906Watermelon (97103) v2mewmbB434
MELO3C006906Watermelon (97103) v2mewmbB437
MELO3C006906Wax gourdmewgoB518
MELO3C006906Wax gourdmewgoB541
MELO3C006906Melon (DHL92) v3.5.1memeB015
MELO3C006906Melon (DHL92) v3.5.1memeB150
MELO3C006906Cucumber (Gy14) v1cgymeB142
MELO3C006906Cucumber (Gy14) v1cgymeB438
MELO3C006906Cucumber (Gy14) v1cgymeB497
MELO3C006906Cucurbita maxima (Rimu)cmameB296
MELO3C006906Cucurbita maxima (Rimu)cmameB375
MELO3C006906Cucurbita maxima (Rimu)cmameB579
MELO3C006906Cucurbita moschata (Rifu)cmomeB289
MELO3C006906Cucurbita moschata (Rifu)cmomeB368
MELO3C006906Cucurbita moschata (Rifu)cmomeB567
MELO3C006906Cucurbita moschata (Rifu)cmomeB835
MELO3C006906Wild cucumber (PI 183967)cpimeB230
MELO3C006906Wild cucumber (PI 183967)cpimeB249
MELO3C006906Cucumber (Chinese Long) v2cumeB236
MELO3C006906Cucumber (Chinese Long) v2cumeB254
MELO3C006906Cucumber (Chinese Long) v2cumeB405
MELO3C006906Watermelon (Charleston Gray)mewcgB422
MELO3C006906Watermelon (Charleston Gray)mewcgB427
MELO3C006906Watermelon (Charleston Gray)mewcgB433
MELO3C006906Watermelon (97103) v1mewmB461
MELO3C006906Watermelon (97103) v1mewmB470
MELO3C006906Cucurbita pepo (Zucchini)cpemeB043
MELO3C006906Cucurbita pepo (Zucchini)cpemeB190
MELO3C006906Cucurbita pepo (Zucchini)cpemeB701
MELO3C006906Bottle gourd (USVL1VR-Ls)lsimeB375
MELO3C006906Bottle gourd (USVL1VR-Ls)lsimeB379
MELO3C006906Cucumber (Gy14) v2cgybmeB200
MELO3C006906Cucumber (Gy14) v2cgybmeB353