MELO3C006769 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006769
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGag-pro-like protein
Locationchr6 : 5830377 .. 5830898 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTCGAGGTTCAGCCACCGTTAACGGATAAAGAAATGACATCTATGTTTATGAATAACTTGTGGGCTCCATTCTATGATCAAATGATTGGTAATGCATCAACAAATTTTTCTGACATTATTGTTGTTGACGAAAGAATTGAATATGGGATAAAGCACGAGAGGTTAGCAGAGGCTACAACTGAATATAGTGGAATAAAGAAAGGAACAATATCTAAGAAGAAAGAAGGAGAGATTCATGCAATTGGTTTTCCTAATTCAGAAAAGCACAAATCAATTTTTGGTCAAAGAAAATATGAGCAAAACTTTCCTTCATATATAAGCAATGTTTCTTATATCCCTTATAATAGCTATGTACCAGCCCATACCTTCTCTAAAACTCCAAAACCTGTTAACTCAAATTCTCCTCGACCATTTGTACAGGGTCAAGGTAGCAAAACCAATTCAGATATATGGCGGTTTGATCTAATTCCCATGACTTATACAGAGCTTTTACCTCAGCTATTTCAAAATCGATAG

mRNA sequence

ATGGCTGTCGAGGTTCAGCCACCGTTAACGGATAAAGAAATGACATCTATGTTTATGAATAACTTGTGGGCTCCATTCTATGATCAAATGATTGGTAATGCATCAACAAATTTTTCTGACATTATTGTTGTTGACGAAAGAATTGAATATGGGATAAAGCACGAGAGGTTAGCAGAGGCTACAACTGAATATAGTGGAATAAAGAAAGGAACAATATCTAAGAAGAAAGAAGGAGAGATTCATGCAATTGGTTTTCCTAATTCAGAAAAGCACAAATCAATTTTTGGTCAAAGAAAATATGAGCAAAACTTTCCTTCATATATAAGCAATGTTTCTTATATCCCTTATAATAGCTATGTACCAGCCCATACCTTCTCTAAAACTCCAAAACCTGTTAACTCAAATTCTCCTCGACCATTTGTACAGGGTCAAGGTAGCAAAACCAATTCAGATATATGGCGGTTTGATCTAATTCCCATGACTTATACAGAGCTTTTACCTCAGCTATTTCAAAATCGATAG

Coding sequence (CDS)

ATGGCTGTCGAGGTTCAGCCACCGTTAACGGATAAAGAAATGACATCTATGTTTATGAATAACTTGTGGGCTCCATTCTATGATCAAATGATTGGTAATGCATCAACAAATTTTTCTGACATTATTGTTGTTGACGAAAGAATTGAATATGGGATAAAGCACGAGAGGTTAGCAGAGGCTACAACTGAATATAGTGGAATAAAGAAAGGAACAATATCTAAGAAGAAAGAAGGAGAGATTCATGCAATTGGTTTTCCTAATTCAGAAAAGCACAAATCAATTTTTGGTCAAAGAAAATATGAGCAAAACTTTCCTTCATATATAAGCAATGTTTCTTATATCCCTTATAATAGCTATGTACCAGCCCATACCTTCTCTAAAACTCCAAAACCTGTTAACTCAAATTCTCCTCGACCATTTGTACAGGGTCAAGGTAGCAAAACCAATTCAGATATATGGCGGTTTGATCTAATTCCCATGACTTATACAGAGCTTTTACCTCAGCTATTTCAAAATCGATAG

Protein sequence

MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEATTEYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVPAHTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQNR*
Homology
[Close]
BLAST of MELO3C006769 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 73/182 (40.11%), Postives = 106/182 (58.24%), Query Frame = 1 

Query: 2    AVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEAT 61
            A +VQPPLTDKEMT +F+N L APFY+++IGNA  NF+D+++  E IE  IK  ++    
Sbjct: 954  AAQVQPPLTDKEMTVLFINTLRAPFYERLIGNAMKNFADLVLSGEIIEGAIKSGKI--EG 1013

Query: 62   TEYSGIKKGTISKKKEGEIHAIGFPNSEKH--KSIFGQRKYEQNFPSYISNVSYIPY-NS 121
             E +  KKG+  KKKEG++ A+   + + H     +    Y+  +P +I NV+  PY   
Sbjct: 1014 HEVASSKKGSTPKKKEGDVQAVAHDSQQAHNFNPYYPYPPYQPFYP-HIGNVTQNPYVYQ 1073

Query: 122  YVPAHTF-------SKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQ 174
             VP  TF       +  P+P+ S +  P    +G KT  +  +FD IP+ YT LLPQL +
Sbjct: 1074 PVPQPTFQTNVLPQTPPPRPIASTN-NPGHGQRGPKTTPERPKFDPIPVPYTTLLPQLIE 1131

[Close]
BLAST of MELO3C006769 vs. TrEMBL
Match: A0A061F1Q4_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_026480 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-23
Identity = 73/182 (40.11%), Postives = 107/182 (58.79%), Query Frame = 1 

Query: 2   AVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEAT 61
           A +VQPPLTDKEMT +F+N L APFY+++IGNA+ NF+D+++  E IE  IK  ++    
Sbjct: 126 AAQVQPPLTDKEMTVLFINTLRAPFYERLIGNATKNFADLVLSGEIIEGAIKSGKI--EG 185

Query: 62  TEYSGIKKGTISKKKEGEIHAIGFPNSEKH--KSIFGQRKYEQNFPSYISNVSYIPY-NS 121
            E +  KKG+  KKKEG++ A+   + + H     +    Y+  +P +I NV+  PY   
Sbjct: 186 HEVASSKKGSTPKKKEGDVQAVAHDSQQAHNFNPYYPYPPYQPFYP-HIGNVTQNPYVYQ 245

Query: 122 YVPAHTF-------SKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQ 174
            VP  TF       +  P+PV S +  P    +G +T  +  +FD IP+ YT LLPQL +
Sbjct: 246 PVPQPTFQTNVLPQTPPPRPVASTN-NPGNGQRGPRTTLEKPKFDPIPVPYTTLLPQLIE 303

[Close]
BLAST of MELO3C006769 vs. TrEMBL
Match: A0A061FBD9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.2e-23
Identity = 72/182 (39.56%), Postives = 106/182 (58.24%), Query Frame = 1 

Query: 2   AVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEAT 61
           A +VQPPLTDKEMT +F+N L APFY+++IGNA+ NF+D+++  E IE  IK  ++    
Sbjct: 234 AAQVQPPLTDKEMTVLFINTLRAPFYERLIGNATKNFADLVLSGEIIEGAIKSGKI--EG 293

Query: 62  TEYSGIKKGTISKKKEGEIHAIGFPNSEKH--KSIFGQRKYEQNFPSYISNVSYIPY-NS 121
            E +  KK +  KKKEG++ A+   + + H     +    Y+  +P +I N++  PY   
Sbjct: 294 HEVANSKKWSTPKKKEGDVQAVAHDSQQAHNFNPYYPYPPYQPFYP-HIGNITQNPYVYQ 353

Query: 122 YVPAHTF-------SKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQ 174
            VP  TF       +  P+PV S +  P    +G KT  +  +FD IP+ YT LLPQL +
Sbjct: 354 PVPQPTFQTNVLPQTPPPRPVASTN-NPGHGQRGPKTTPERPKFDPIPVPYTTLLPQLIE 411

[Close]
BLAST of MELO3C006769 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 69/181 (38.12%), Postives = 106/181 (58.56%), Query Frame = 1 

Query: 2    AVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEAT 61
            A +VQPPLTDKEMT +F+N L APFY+++IGNA+ NF+D+++  E IE  IK  ++    
Sbjct: 893  AAQVQPPLTDKEMTVLFINTLRAPFYERLIGNATKNFTDLVLSGEIIEGAIKSGKI--EG 952

Query: 62   TEYSGIKKGTISKKKEGEIHAIGFPNSEKHK-SIFGQRKYEQNFPSYISNVSYIPY-NSY 121
             E +  KKG+  +KKEG++ A+   + + H  +++      Q F  +I N++  PY    
Sbjct: 953  HEVASSKKGSTPRKKEGDVQAVAHDSQQAHNFNLYYPYPPYQPFYPHIGNITQNPYVYQP 1012

Query: 122  VPAHTF-------SKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQN 174
            +P  TF       +  P+P+ S +  P    +G KT  +  +FD IP+ YT LLPQL + 
Sbjct: 1013 IPQPTFQTNVLPQTPPPRPIASTN-NPGHGQRGPKTTPERPKFDHIPVPYTTLLPQLIEK 1070

[Close]
BLAST of MELO3C006769 vs. TrEMBL
Match: A0A151QQK1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_046689 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 66/184 (35.87%), Postives = 103/184 (55.98%), Query Frame = 1 

Query: 1   MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEA 60
           +A +V+PPL+D+E  ++F++ L APFYD+MIGN  +NFSDI+++ ERIE G++  ++A  
Sbjct: 156 VAAQVEPPLSDREAVALFIDTLQAPFYDKMIGNILSNFSDIVIIGERIENGMRSGKIAVN 215

Query: 61  TTEYSGIKK--GTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNS 120
           + E +G++K      KKKEG+ +A+ F NS +  +   Q  Y         N++ +  + 
Sbjct: 216 SIEIAGLRKFSNGAGKKKEGDTNAVTF-NSPRSPN--NQPPYFYTPHMVYPNITAVSPHP 275

Query: 121 YVPAHTFSK------TPKPVNSNSP----RPFVQGQGSKTNSDIWRFDLIPMTYTELLPQ 173
             P H   +      T +P  S  P       V+ Q ++    I  FD IPM+YTEL P 
Sbjct: 276 QQPIHQALQASPTIPTARPPQSTQPWNQNSNHVRSQNTQDRKPI-EFDPIPMSYTELFPL 335

[Close]
BLAST of MELO3C006769 vs. NCBI nr
Match: gi|659131252|ref|XP_008465589.1| (PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 5.6e-81
Identity = 150/172 (87.21%), Postives = 157/172 (91.28%), Query Frame = 1 

Query: 1   MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEA 60
           M VEVQPPL DKEMTSMFMN L APFY++MIGNASTNFS+IIV+ ERIEYGIKH RLAEA
Sbjct: 258 MTVEVQPPLIDKEMTSMFMNTLRAPFYERMIGNASTNFSNIIVIGERIEYGIKHGRLAEA 317

Query: 61  TTEYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYV 120
            TEY GIKKGTISKKKEGE+HAIGFPNS KHKSIFGQRKYEQNFPSYISNVS+IPYNSYV
Sbjct: 318 KTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNVSHIPYNSYV 377

Query: 121 PAHTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQN 173
           PAHT S+ PK  NSNSPRPFVQGQGSKTNSD WRFDLIPMTYTELLPQL QN
Sbjct: 378 PAHTVSEAPKLFNSNSPRPFVQGQGSKTNSDTWRFDLIPMTYTELLPQLIQN 429

[Close]
BLAST of MELO3C006769 vs. NCBI nr
Match: gi|659131240|ref|XP_008465582.1| (PREDICTED: uncharacterized protein LOC103503218 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.6e-80
Identity = 148/169 (87.57%), Postives = 156/169 (92.31%), Query Frame = 1 

Query: 3   VEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEATT 62
           VEVQPPLTDKEMT +FMN L APFY++MIGNASTNFSDIIV+ ERIEYGIKH RLAEATT
Sbjct: 215 VEVQPPLTDKEMTYVFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAEATT 274

Query: 63  EYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYVPA 122
           EY GIKKGTISKKKEGE+H IGFPNS KHKSIFGQRKYEQNFPSYISNVS+IPYNSYVPA
Sbjct: 275 EYGGIKKGTISKKKEGEVHGIGFPNSGKHKSIFGQRKYEQNFPSYISNVSHIPYNSYVPA 334

Query: 123 HTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQ 172
           HT S+T KPVNSNSPRPFVQGQGSKTNSD WRFD IPMTYTELLPQL +
Sbjct: 335 HTVSETSKPVNSNSPRPFVQGQGSKTNSDTWRFDPIPMTYTELLPQLIK 383

[Close]
BLAST of MELO3C006769 vs. NCBI nr
Match: gi|659123179|ref|XP_008461534.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103500105 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 4.7e-80
Identity = 147/173 (84.97%), Postives = 158/173 (91.33%), Query Frame = 1 

Query: 1   MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEA 60
           +AVE+QPPLT+KEMTSMFMN L APFY++MIGNASTNFSDIIV+ ERIEYGIKH RL EA
Sbjct: 195 IAVELQPPLTEKEMTSMFMNTLRAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLVEA 254

Query: 61  TTEYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYV 120
           TTEY GIKKGTISKKKEGE+HAIGFPN  KHKSIFGQRKYEQNFPSYISNV +IPYNSY+
Sbjct: 255 TTEYGGIKKGTISKKKEGEVHAIGFPNLGKHKSIFGQRKYEQNFPSYISNVYHIPYNSYI 314

Query: 121 PAHTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQNR 174
            AHT S+TPKPVNSNSPRPFVQGQGSKTNS+ WRFD IPMTY ELLPQL QNR
Sbjct: 315 SAHTVSETPKPVNSNSPRPFVQGQGSKTNSNTWRFDPIPMTYIELLPQLIQNR 367

[Close]
BLAST of MELO3C006769 vs. NCBI nr
Match: gi|659127206|ref|XP_008463580.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501689 [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 4.7e-72
Identity = 136/167 (81.44%), Postives = 149/167 (89.22%), Query Frame = 1 

Query: 1   MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEA 60
           MA +VQPPL DKEMTS+FMN L APFYD+M GNASTNFS+IIV+ ERIEYGIKHE+LAEA
Sbjct: 310 MAAQVQPPLIDKEMTSIFMNTLRAPFYDRMSGNASTNFSNIIVIGERIEYGIKHEKLAEA 369

Query: 61  TTEYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYV 120
           TTEY G +KGTISKKKEGE+HAIGFPNS K+KSIFGQRKYE+NF S ISNVS+I YNSYV
Sbjct: 370 TTEYGGKEKGTISKKKEGEVHAIGFPNSGKYKSIFGQRKYEKNFLSCISNVSHISYNSYV 429

Query: 121 PAHTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLP 168
             HTF +TPKPVNSNSP+PFVQGQGSKTNSD WRFD I MTYTELLP
Sbjct: 430 STHTFFETPKPVNSNSPQPFVQGQGSKTNSDTWRFDPITMTYTELLP 476

[Close]
BLAST of MELO3C006769 vs. NCBI nr
Match: gi|659129309|ref|XP_008464622.1| (PREDICTED: uncharacterized protein LOC103502461 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 122/173 (70.52%), Postives = 128/173 (73.99%), Query Frame = 1 

Query: 1   MAVEVQPPLTDKEMTSMFMNNLWAPFYDQMIGNASTNFSDIIVVDERIEYGIKHERLAEA 60
           MA EVQPPLTDKEMTS+                              IEYGIKH RLA+A
Sbjct: 226 MAAEVQPPLTDKEMTSI------------------------------IEYGIKHGRLAKA 285

Query: 61  TTEYSGIKKGTISKKKEGEIHAIGFPNSEKHKSIFGQRKYEQNFPSYISNVSYIPYNSYV 120
           TTEY  IKKGTISKKKE E+HAIGFPNS KHKSIFGQRKYEQNFPSYISNVSYIPYNSYV
Sbjct: 286 TTEYGRIKKGTISKKKEEEVHAIGFPNSGKHKSIFGQRKYEQNFPSYISNVSYIPYNSYV 345

Query: 121 PAHTFSKTPKPVNSNSPRPFVQGQGSKTNSDIWRFDLIPMTYTELLPQLFQNR 174
            AHT S+TPKPVNSNSP+PFV+ QGSK NSD WRFD IPMTY ELL QL QNR
Sbjct: 346 LAHTVSETPKPVNSNSPQPFVKRQGSKINSDTWRFDPIPMTYIELLRQLIQNR 368

The following BLAST results are available for this feature:
BLAST of MELO3C006769 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061E378_THECC1.7e-2340.11Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1[more]
A0A061F1Q4_THECC2.2e-2340.11Gag-pro-like protein OS=Theobroma cacao GN=TCM_026480 PE=4 SV=1[more]
A0A061FBD9_THECC8.2e-2339.56Uncharacterized protein OS=Theobroma cacao GN=TCM_033215 PE=4 SV=1[more]
A0A061EXR3_THECC1.1e-2238.12Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1[more]
A0A151QQK1_CAJCA1.1e-1935.87Uncharacterized protein OS=Cajanus cajan GN=KK1_046689 PE=4 SV=1[more]
BLAST of MELO3C006769 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131252|ref|XP_008465589.1|5.6e-8187.21PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo][more]
gi|659131240|ref|XP_008465582.1|3.6e-8087.57PREDICTED: uncharacterized protein LOC103503218 [Cucumis melo][more]
gi|659123179|ref|XP_008461534.1|4.7e-8084.97PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103500105 [Cucumis me... [more]
gi|659127206|ref|XP_008463580.1|4.7e-7281.44PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501689 [Cucumis me... [more]
gi|659129309|ref|XP_008464622.1|3.9e-5870.52PREDICTED: uncharacterized protein LOC103502461 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006769T1MELO3C006769T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006769Cucurbita maxima (Rimu)cmameB242
MELO3C006769Cucurbita maxima (Rimu)cmameB763
MELO3C006769Cucurbita moschata (Rifu)cmomeB230
MELO3C006769Cucurbita moschata (Rifu)cmomeB755
MELO3C006769Wild cucumber (PI 183967)cpimeB230
MELO3C006769Cucumber (Chinese Long) v2cumeB236
MELO3C006769Watermelon (Charleston Gray)mewcgB427
MELO3C006769Watermelon (97103) v1mewmB461
MELO3C006769Cucurbita pepo (Zucchini)cpemeB585
MELO3C006769Cucurbita pepo (Zucchini)cpemeB813
MELO3C006769Bottle gourd (USVL1VR-Ls)lsimeB379
MELO3C006769Cucumber (Gy14) v2cgybmeB200
MELO3C006769Silver-seed gourdcarmeB0280
MELO3C006769Silver-seed gourdcarmeB0693
MELO3C006769Cucumber (Chinese Long) v3cucmeB236
MELO3C006769Watermelon (97103) v2mewmbB434
MELO3C006769Wax gourdmewgoB529
MELO3C006769Cucumber (Gy14) v1cgymeB439