MELO3C006709 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006709
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Bromodomain and WD repeat-containing protein 1
Location	chr6 : 5253317 .. 5254618 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTTCGAAAGTTTGTTTGTGGTTCTACACCTTCAATTAACCTGAAACATTCAAGTTTTCCCATTAAGTTGCACGAACAAACTCAATTTGAAGAACCTGAGACTAATCAGACGTTGGAGCCTGATGTAGAAATTGACCCCAGAGAAGTATATTTTCTTATTATGCACTTTCTTTCATCTGGGCCATGTCTTAGAACTTGTGGGCTACTATGGGATGAGCTTTTTGAACACCAGCTTTTACCCCGACGATATCATGCATGGTATTCAAGAAGTGGGGTGCATAGTGGCCATGAAAATGACGATGGCTTGTCATTTCCATTAAGTTACCAACACTTGGTGGAGAGGTATGCATCTCTTCTTGCTAAAACTTGTGCCTTACTTCTTTTTGTAGTTTTTTTTTGGGGGTGGGGTAGTGATGGTATTTTGACCCAAGATTACTAATGAAAATCCTATTACAATTGAGAGACAAAAGGGAAGAAAAATCCGTGCTTTTGGTACTTGCTTCTTCCATTGTTCATTATTGAATTTGATTCAACACATACGAAAGTAAATCTATCTTGTAATGTTACTTTTTGTAGCCTTCCATGGTATAATTATTATTATGTTGTTGTTACCCTTAAAGGTATCCCCATGTCGATAAGAATCACCTGATAAAACTTTTGAAGCAATTGATACTTAACAAGGCCCCTCCATCTAGAGGTATGAGTGGTGGAATTGCTCCAAATGCTGCTGATGTGCCTACATTATTGGGAACGGGCACATTTTCACTTTTAAGCTGTAAGTGATAGTTGCTTGCACCTTTTCCTTGTCAATCTGTTGTTACATCATACAGTGTTCTTGGATTTTGGAGATTATTAGTGAAGACTTAGGTTATAATACCAACAATACTTTCTTATGCTGTTTTTGAGCCCGATCCAATTATTTACGTGGAAGTTCTAGACTACTATTCTATCTTTTGCTTTGTGGAGTTACTATTCATTTTTTTCTCCGGAAAATTCTTGATTCCCAGATGATAAACATGAAGGAGTTGGCAAACCAAGTGGTCCCCCAGCACACATGCGTTGGCCTCATATGAAAGCTGATTCTGTTCGTGGATTAAGTTTGAGAGAAATTGGAGGTGGTTTCTCCCGACATCAACGTGCGCCTTCTGTACGTGCAGCATGTTATGCAATTGCTAAGCCATCAACAATGGTTCAGAAAATGCAAAACATAAAGAGGCTACGAGGGCATAGGAATGCTGTCTATTGTGGTATCTTTCTCTCTTTCAACTTTTTTTTTTCTTCTTCTTCTTTTAGATAG

mRNA sequence

ATGGCTCTTCGAAAGTTTGTTTGTGGTTCTACACCTTCAATTAACCTGAAACATTCAAGTTTTCCCATTAAGTTGCACGAACAAACTCAATTTGAAGAACCTGAGACTAATCAGACGTTGGAGCCTGATGTAGAAATTGACCCCAGAGAAGTATATTTTCTTATTATGCACTTTCTTTCATCTGGGCCATGTCTTAGAACTTGTGGGCTACTATGGGATGAGCTTTTTGAACACCAGCTTTTACCCCGACGATATCATGCATGGTATTCAAGAAGTGGGGTGCATAGTGGCCATGAAAATGACGATGGCTTGTCATTTCCATTAAGTTACCAACACTTGGTGGAGAGGTATCCCCATGTCGATAAGAATCACCTGATAAAACTTTTGAAGCAATTGATACTTAACAAGGCCCCTCCATCTAGAGGTATGAGTGGTGGAATTGCTCCAAATGCTGCTGATGTGCCTACATTATTGGGAACGGGCACATTTTCACTTTTAAGCTATGATAAACATGAAGGAGTTGGCAAACCAAGTGGTCCCCCAGCACACATGCGTTGGCCTCATATGAAAGCTGATTCTGTTCGTGGATTAAGTTTGAGAGAAATTGGAGGTGGTTTCTCCCGACATCAACGTGCGCCTTCTGTACGTGCAGCATGTTATGCAATTGCTAAGCCATCAACAATGGTTCAGAAAATGCAAAACATAAAGAGGCTACGAGGGCATAGGAATGCTGTCTATTGTGGTATCTTTCTCTCTTTCAACTTTTTTTTTTCTTCTTCTTCTTTTAGATAG

Coding sequence (CDS)

ATGGCTCTTCGAAAGTTTGTTTGTGGTTCTACACCTTCAATTAACCTGAAACATTCAAGTTTTCCCATTAAGTTGCACGAACAAACTCAATTTGAAGAACCTGAGACTAATCAGACGTTGGAGCCTGATGTAGAAATTGACCCCAGAGAAGTATATTTTCTTATTATGCACTTTCTTTCATCTGGGCCATGTCTTAGAACTTGTGGGCTACTATGGGATGAGCTTTTTGAACACCAGCTTTTACCCCGACGATATCATGCATGGTATTCAAGAAGTGGGGTGCATAGTGGCCATGAAAATGACGATGGCTTGTCATTTCCATTAAGTTACCAACACTTGGTGGAGAGGTATCCCCATGTCGATAAGAATCACCTGATAAAACTTTTGAAGCAATTGATACTTAACAAGGCCCCTCCATCTAGAGGTATGAGTGGTGGAATTGCTCCAAATGCTGCTGATGTGCCTACATTATTGGGAACGGGCACATTTTCACTTTTAAGCTATGATAAACATGAAGGAGTTGGCAAACCAAGTGGTCCCCCAGCACACATGCGTTGGCCTCATATGAAAGCTGATTCTGTTCGTGGATTAAGTTTGAGAGAAATTGGAGGTGGTTTCTCCCGACATCAACGTGCGCCTTCTGTACGTGCAGCATGTTATGCAATTGCTAAGCCATCAACAATGGTTCAGAAAATGCAAAACATAAAGAGGCTACGAGGGCATAGGAATGCTGTCTATTGTGGTATCTTTCTCTCTTTCAACTTTTTTTTTTCTTCTTCTTCTTTTAGATAG

Protein sequence

MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLSSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHVDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCGIFLSFNFFFSSSSFR*

Homology

[Close]

BLAST of MELO3C006709 vs. Swiss-Prot
Match: BRWD1_MOUSE (Bromodomain and WD repeat-containing protein 1 OS=Mus musculus GN=Brwd1 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12
Identity = 68/207 (32.85%), Postives = 100/207 (48.31%), Query Frame = 1


Query: 50  EVYFLIMHFLSSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLS 109
           E+YFLI  +LS+GPC R   +L  EL ++QLLP+R   W        G+E++       S
Sbjct: 17  ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHN------RS 76

Query: 110 YQHLVERYPHVDKNHLIKLLKQL--ILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLL- 169
           Y+ LV    HV  +HL+++ +++  +L+K  P         P+ + V +LLG G  SLL 
Sbjct: 77  YEELVLSNKHVAPDHLLQICQRIGPMLDKEVP---------PSISRVTSLLGAGRQSLLR 136

Query: 170 -SYDKHEGVGKPSGPPA--HMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIA 229
            + D    V K S   A    R P M  +     SL EI      H+       + ++ A
Sbjct: 137 TAKDCRHTVWKGSAFAALHRGRPPEMPVNYGPPPSLVEI------HRGRQLTGCSTFSTA 194

Query: 230 KPSTMVQKMQNIKRLRGHRNAVYCGIF 251
            P TM Q ++  +R+ GH +AVYC  F
Sbjct: 197 FPGTMYQHIKMHRRILGHLSAVYCVAF 194

[Close]

BLAST of MELO3C006709 vs. Swiss-Prot
Match: BRWD1_HUMAN (Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=4)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12
Identity = 71/224 (31.70%), Postives = 107/224 (47.77%), Query Frame = 1


Query: 33  EPETNQTLEPDVEIDPREVYFLIMHFLSSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRS 92
           EP + +   P +E    E+YFLI  +LS+GPC R   +L  EL ++QLLP+R   W    
Sbjct: 3   EPSSARRPVPLIE---SELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W---- 62

Query: 93  GVHSGHENDDGLSFPLSYQHLVERYPHVDKNHLIKLLKQL--ILNKAPPSRGMSGGIAPN 152
               G+E++       SY+ LV    HV  +HL+++ +++  +L+K  P         P+
Sbjct: 63  ---EGNEHN------RSYEELVLSNKHVAPDHLLQICQRIGPMLDKEIP---------PS 122

Query: 153 AADVPTLLGTGTFSLL--SYDKHEGVGKPSGPPA--HMRWPHMKADSVRGLSLREIGGGF 212
            + V +LLG G  SLL  + D    V K S   A    R P M  +     +L EI    
Sbjct: 123 ISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEI---- 182

Query: 213 SRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCGIF 251
             H+       + ++ A P TM Q ++  +R+ GH +AVYC  F
Sbjct: 183 --HRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAF 194

[Close]

BLAST of MELO3C006709 vs. Swiss-Prot
Match: BRWD3_MOUSE (Bromodomain and WD repeat-containing protein 3 OS=Mus musculus GN=Brwd3 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 58/212 (27.36%), Postives = 93/212 (43.87%), Query Frame = 1


Query: 50  EVYFLIMHFLSSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLS 109
           E+Y+LI  FL SGPC ++  +L  EL EHQL+PRR   W             +G     S
Sbjct: 11  ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 70

Query: 110 YQHLVERYPHVDKNHLIKLLKQL--ILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLS 169
           ++ LV    H+  ++L+K+ +++  +L+K  P          +   V TLLG G  SLL 
Sbjct: 71  FEDLVAANAHIPPDYLLKICERIGPLLDKEIPQ---------SVPGVQTLLGVGRQSLLR 130

Query: 170 ---------YDKHEGVGKPSGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAA 229
                    ++         G P  +   ++K  +V  ++      G SR          
Sbjct: 131 DAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSARQLTGCSR---------- 188

Query: 230 CYAIAKPSTMVQKMQNIKRLRGHRNAVYCGIF 251
            ++   PS+  Q ++  KR+ GH ++VYC  F
Sbjct: 191 -FSHVFPSSAYQHIKMHKRILGHLSSVYCVAF 188

[Close]

BLAST of MELO3C006709 vs. Swiss-Prot
Match: BRWD3_HUMAN (Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens GN=BRWD3 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-09
Identity = 58/212 (27.36%), Postives = 92/212 (43.40%), Query Frame = 1


Query: 50  EVYFLIMHFLSSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLS 109
           E+Y+LI  FL SGPC ++  +L  EL EHQL+PRR   W             +G     S
Sbjct: 11  ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 70

Query: 110 YQHLVERYPHVDKNHLIKLLKQL--ILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLS 169
           ++ LV    H+  ++L+K+ +++  +L+K  P          +   V TLLG G  SLL 
Sbjct: 71  FEDLVAANAHIPPDYLLKICERIGPLLDKEIPQ---------SVPGVQTLLGVGRQSLLR 130

Query: 170 ---------YDKHEGVGKPSGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAA 229
                    ++         G P  +   ++K  +V  ++      G SR          
Sbjct: 131 DAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSARQLTGCSR---------- 188

Query: 230 CYAIAKPSTMVQKMQNIKRLRGHRNAVYCGIF 251
            +    PS+  Q ++  KR+ GH ++VYC  F
Sbjct: 191 -FGHIFPSSAYQHIKMHKRILGHLSSVYCVAF 188

[Close]

BLAST of MELO3C006709 vs. TrEMBL
Match: A0A0A0LAQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166260 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.4e-143
Identity = 246/250 (98.40%), Postives = 248/250 (99.20%), Query Frame = 1


Query: 1   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS 60
           MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETN+TLEPDVEIDPREVYFLIMHFLS
Sbjct: 4   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNRTLEPDVEIDPREVYFLIMHFLS 63

Query: 61  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV 120
           SGPCLRTCGLLWDELFEHQLLPRRYHAWYSR+GVHSGHENDDGLSFPLSYQHLVERYPHV
Sbjct: 64  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRNGVHSGHENDDGLSFPLSYQHLVERYPHV 123

Query: 121 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP 180
           DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGV KPSGP
Sbjct: 124 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVSKPSGP 183

Query: 181 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 240
           PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG
Sbjct: 184 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 243

Query: 241 HRNAVYCGIF 251
           HRNAVYC IF
Sbjct: 244 HRNAVYCAIF 253

[Close]

BLAST of MELO3C006709 vs. TrEMBL
Match: W9QVV9_9ROSA (Bromodomain and WD repeat-containing protein 1 OS=Morus notabilis GN=L484_007724 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.7e-101
Identity = 183/252 (72.62%), Postives = 210/252 (83.33%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRKFV  G  PS+++K  +F   + E T+F + ET+  +EPDV+ID REVYFLIMHFL
Sbjct: 1   MALRKFVPSGEAPSVSVKPLNFSRAMDEDTRFVDSETSLAVEPDVDIDLREVYFLIMHFL 60

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSR+G+HSG ENDDG SFPLSY  LVERY H
Sbjct: 61  SAGPCRRTYGQFWNELLEHQLLPRRYHAWYSRNGLHSGDENDDGKSFPLSYNMLVERYSH 120

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKP-S 180
           V+K+HL+KLLKQLI++ APPSRG+SGG APNAADVPTL+GTG+FSLL  D  + V     
Sbjct: 121 VEKDHLVKLLKQLIISTAPPSRGISGGNAPNAADVPTLMGTGSFSLLRLDDRDKVDNDIR 180

Query: 181 GPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRL 240
            PPA+MRWPHMKAD VRGLSLREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKRL
Sbjct: 181 QPPAYMRWPHMKADQVRGLSLREIGGGFARHHRAPSIRAACYAIAKPSTMVQKMQNIKRL 240

Query: 241 RGHRNAVYCGIF 251
           RGHRNAVYC I+
Sbjct: 241 RGHRNAVYCAIY 252

[Close]

BLAST of MELO3C006709 vs. TrEMBL
Match: A0A067G8Q3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002511mg PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.4e-100
Identity = 179/251 (71.31%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRK++     PS  +K  SF  K+HE  Q    +T+Q  E DV++D REVYFLIMHFL
Sbjct: 28  MALRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL 87

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSRSG+ SG ENDDG+SFPLSY  LVERYPH
Sbjct: 88  STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH 147

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSG 180
           ++K+HL+KLLKQLI+N + PSR M GG APNAADVPTLLG G+FSLLSYD+ +G  +   
Sbjct: 148 IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH 207

Query: 181 PPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLR 240
           PPAHMRWPHM AD VRGL LREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKR+R
Sbjct: 208 PPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR 267

Query: 241 GHRNAVYCGIF 251
           GHRNAVYC IF
Sbjct: 268 GHRNAVYCAIF 278

[Close]

BLAST of MELO3C006709 vs. TrEMBL
Match: A0A067G0H7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002511mg PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 7.4e-100
Identity = 179/251 (71.31%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRK++     PS  +K  SF  K+HE  Q    +T+Q  E DV++D REVYFLIMHFL
Sbjct: 1   MALRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL 60

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSRSG+ SG ENDDG+SFPLSY  LVERYPH
Sbjct: 61  STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH 120

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSG 180
           ++K+HL+KLLKQLI+N + PSR M GG APNAADVPTLLG G+FSLLSYD+ +G  +   
Sbjct: 121 IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH 180

Query: 181 PPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLR 240
           PPAHMRWPHM AD VRGL LREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKR+R
Sbjct: 181 PPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR 240

Query: 241 GHRNAVYCGIF 251
           GHRNAVYC IF
Sbjct: 241 GHRNAVYCAIF 251

[Close]

BLAST of MELO3C006709 vs. TrEMBL
Match: V4S6Z8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004131mg PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.2e-99
Identity = 177/251 (70.52%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRK++     PS  +K  +F  K+HE  Q    +T+Q  E DV++D REVYFLIMHFL
Sbjct: 1   MALRKYIPSADAPSGTMKPLNFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL 60

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSRSG+ SG ENDDG+SFPLSY  LVERYPH
Sbjct: 61  STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH 120

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSG 180
           ++K+HL+KLLKQLI+N + PSR M GG APNAADVPTLLG G+FSLLSYD+ +G  +   
Sbjct: 121 IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH 180

Query: 181 PPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLR 240
           PPAHMRWPHM AD +RGL LREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKR+R
Sbjct: 181 PPAHMRWPHMYADQIRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR 240

Query: 241 GHRNAVYCGIF 251
           GHRNAVYC IF
Sbjct: 241 GHRNAVYCAIF 251

[Close]

BLAST of MELO3C006709 vs. TAIR10
Match: AT5G49430.1 (AT5G49430.1 WD40/YVTN repeat-like-containing domain;Bromodomain)

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-83
Identity = 156/252 (61.90%), Postives = 184/252 (73.02%), Query Frame = 1


Query: 1   MALRKFVC-GSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRK    G + S+ +K  +F  KL    Q  +P+  Q++ P++++D REVYFL++H L
Sbjct: 1   MALRKNTPKGDSVSLPMKPLNFSRKLPGNVQIPDPDIVQSVAPNIDLDLREVYFLMLHLL 60

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           SSGPC +T  LL  EL EH+LLPRRYHAWYSRSG+ SG ENDDG SFPL+Y  L +RY H
Sbjct: 61  SSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLNYTELAKRYSH 120

Query: 121 VDKNHLIKLLKQLIL--NKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKP 180
           V K+HL++LLKQL+   N+  PSRG+  G     A VPTLLGTG+FSLLS DK       
Sbjct: 121 VKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGSDL 180

Query: 181 SGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKR 240
             PP  MRWPHM AD VRG+SLREIGGGF+RH RAPS+RAACY IAKPS+MVQKMQNIKR
Sbjct: 181 KPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKR 240

Query: 241 LRGHRNAVYCGI 250
           LRGHRNAVYC I
Sbjct: 241 LRGHRNAVYCAI 252

[Close]

BLAST of MELO3C006709 vs. TAIR10
Match: AT2G47410.1 (AT2G47410.1 WD40/YVTN repeat-like-containing domain;Bromodomain)

HSP 1 Score: 294.7 bits (753), Expect = 5.8e-80
Identity = 147/241 (61.00%), Postives = 177/241 (73.44%), Query Frame = 1


Query: 25  LHEQTQFEEPET-------NQTLEP--------DVEIDPREVYFLIMHFLSSGPCLRTCG 84
           +H+ T F EP         N  L+P        D+++D REVYFLI+HFLS GPC RT G
Sbjct: 4   IHKSTPFMEPSNLAKLVQGNVPLQPHDSHSSLTDLDMDLREVYFLILHFLSIGPCERTFG 63

Query: 85  LLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHVDKNHLIKLL 144
            L DE+ E  LLPRRYH+W+SRSG++SG  +DDG+S PLSY +L+ERYPH++K+HL+KLL
Sbjct: 64  HLRDEILEKGLLPRRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLL 123

Query: 145 KQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGPPAHMRWPHM 204
           KQLILN + PS     G APNAADVPTLLG+GTFSL+    +    K     +++RWPHM
Sbjct: 124 KQLILNPSFPSHMRVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHM 183

Query: 205 KADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRGHRNAVYCGI 251
            AD VRGLSLREIGGGF +H RAPS+ +AC+AIAKPSTMVQKMQNIK+LRGHRNAVYC I
Sbjct: 184 HADQVRGLSLREIGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAI 243

[Close]

BLAST of MELO3C006709 vs. NCBI nr
Match: gi|659076934|ref|XP_008438943.1| (PREDICTED: bromodomain and WD repeat-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 521.9 bits (1343), Expect = 6.4e-145
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1


Query: 1   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS 60
           MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS
Sbjct: 4   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS 63

Query: 61  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV 120
           SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV
Sbjct: 64  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV 123

Query: 121 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP 180
           DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP
Sbjct: 124 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP 183

Query: 181 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 240
           PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG
Sbjct: 184 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 243

Query: 241 HRNAVYCGIF 251
           HRNAVYC IF
Sbjct: 244 HRNAVYCAIF 253

[Close]

BLAST of MELO3C006709 vs. NCBI nr
Match: gi|778679054|ref|XP_011651081.1| (PREDICTED: bromodomain and WD repeat-containing protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-143
Identity = 246/250 (98.40%), Postives = 248/250 (99.20%), Query Frame = 1


Query: 1   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS 60
           MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETN+TLEPDVEIDPREVYFLIMHFLS
Sbjct: 4   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNRTLEPDVEIDPREVYFLIMHFLS 63

Query: 61  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV 120
           SGPCLRTCGLLWDELFEHQLLPRRYHAWYSR+GVHSGHENDDGLSFPLSYQHLVERYPHV
Sbjct: 64  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRNGVHSGHENDDGLSFPLSYQHLVERYPHV 123

Query: 121 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP 180
           DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGV KPSGP
Sbjct: 124 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVSKPSGP 183

Query: 181 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 240
           PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG
Sbjct: 184 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 243

Query: 241 HRNAVYCGIF 251
           HRNAVYC IF
Sbjct: 244 HRNAVYCAIF 253

[Close]

BLAST of MELO3C006709 vs. NCBI nr
Match: gi|700202028|gb|KGN57161.1| (hypothetical protein Csa_3G166260 [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.0e-143
Identity = 246/250 (98.40%), Postives = 248/250 (99.20%), Query Frame = 1


Query: 1   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFLS 60
           MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETN+TLEPDVEIDPREVYFLIMHFLS
Sbjct: 4   MALRKFVCGSTPSINLKHSSFPIKLHEQTQFEEPETNRTLEPDVEIDPREVYFLIMHFLS 63

Query: 61  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPHV 120
           SGPCLRTCGLLWDELFEHQLLPRRYHAWYSR+GVHSGHENDDGLSFPLSYQHLVERYPHV
Sbjct: 64  SGPCLRTCGLLWDELFEHQLLPRRYHAWYSRNGVHSGHENDDGLSFPLSYQHLVERYPHV 123

Query: 121 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSGP 180
           DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGV KPSGP
Sbjct: 124 DKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVSKPSGP 183

Query: 181 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 240
           PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG
Sbjct: 184 PAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLRG 243

Query: 241 HRNAVYCGIF 251
           HRNAVYC IF
Sbjct: 244 HRNAVYCAIF 253

[Close]

BLAST of MELO3C006709 vs. NCBI nr
Match: gi|703091290|ref|XP_010094309.1| (Bromodomain and WD repeat-containing protein 1 [Morus notabilis])

HSP 1 Score: 375.2 bits (962), Expect = 9.6e-101
Identity = 183/252 (72.62%), Postives = 210/252 (83.33%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRKFV  G  PS+++K  +F   + E T+F + ET+  +EPDV+ID REVYFLIMHFL
Sbjct: 1   MALRKFVPSGEAPSVSVKPLNFSRAMDEDTRFVDSETSLAVEPDVDIDLREVYFLIMHFL 60

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSR+G+HSG ENDDG SFPLSY  LVERY H
Sbjct: 61  SAGPCRRTYGQFWNELLEHQLLPRRYHAWYSRNGLHSGDENDDGKSFPLSYNMLVERYSH 120

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKP-S 180
           V+K+HL+KLLKQLI++ APPSRG+SGG APNAADVPTL+GTG+FSLL  D  + V     
Sbjct: 121 VEKDHLVKLLKQLIISTAPPSRGISGGNAPNAADVPTLMGTGSFSLLRLDDRDKVDNDIR 180

Query: 181 GPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRL 240
            PPA+MRWPHMKAD VRGLSLREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKRL
Sbjct: 181 QPPAYMRWPHMKADQVRGLSLREIGGGFARHHRAPSIRAACYAIAKPSTMVQKMQNIKRL 240

Query: 241 RGHRNAVYCGIF 251
           RGHRNAVYC I+
Sbjct: 241 RGHRNAVYCAIY 252

[Close]

BLAST of MELO3C006709 vs. NCBI nr
Match: gi|641853038|gb|KDO71897.1| (hypothetical protein CISIN_1g0002511mg, partial [Citrus sinensis])

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 179/251 (71.31%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 1   MALRKFV-CGSTPSINLKHSSFPIKLHEQTQFEEPETNQTLEPDVEIDPREVYFLIMHFL 60
           MALRK++     PS  +K  SF  K+HE  Q    +T+Q  E DV++D REVYFLIMHFL
Sbjct: 28  MALRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL 87

Query: 61  SSGPCLRTCGLLWDELFEHQLLPRRYHAWYSRSGVHSGHENDDGLSFPLSYQHLVERYPH 120
           S+GPC RT G  W+EL EHQLLPRRYHAWYSRSG+ SG ENDDG+SFPLSY  LVERYPH
Sbjct: 88  STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH 147

Query: 121 VDKNHLIKLLKQLILNKAPPSRGMSGGIAPNAADVPTLLGTGTFSLLSYDKHEGVGKPSG 180
           ++K+HL+KLLKQLI+N + PSR M GG APNAADVPTLLG G+FSLLSYD+ +G  +   
Sbjct: 148 IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH 207

Query: 181 PPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKRLR 240
           PPAHMRWPHM AD VRGL LREIGGGF+RH RAPS+RAACYAIAKPSTMVQKMQNIKR+R
Sbjct: 208 PPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR 267

Query: 241 GHRNAVYCGIF 251
           GHRNAVYC IF
Sbjct: 268 GHRNAVYCAIF 278

The following BLAST results are available for this feature:

BLAST of MELO3C006709 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BRWD1_MOUSE	1.3e-12	32.85	Bromodomain and WD repeat-containing protein 1 OS=Mus musculus GN=Brwd1 PE=1 SV=...	[more]
BRWD1_HUMAN	1.7e-12	31.70	Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=...	[more]
BRWD3_MOUSE	1.7e-09	27.36	Bromodomain and WD repeat-containing protein 3 OS=Mus musculus GN=Brwd3 PE=1 SV=...	[more]
BRWD3_HUMAN	3.0e-09	27.36	Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens GN=BRWD3 PE=1 SV=...	[more]

BLAST of MELO3C006709 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAQ0_CUCSA	1.4e-143	98.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166260 PE=4 SV=1	[more]
W9QVV9_9ROSA	6.7e-101	72.62	Bromodomain and WD repeat-containing protein 1 OS=Morus notabilis GN=L484_007724...	[more]
A0A067G8Q3_CITSI	7.4e-100	71.31	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002511mg PE=4 ...	[more]
A0A067G0H7_CITSI	7.4e-100	71.31	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002511mg PE=4 ...	[more]
V4S6Z8_9ROSI	2.2e-99	70.52	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004131mg PE=4 SV=1	[more]

BLAST of MELO3C006709 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49430.1	2.5e-83	61.90	WD40/YVTN repeat-like-containing domain;Bromodomain	[more]
AT2G47410.1	5.8e-80	61.00	WD40/YVTN repeat-like-containing domain;Bromodomain	[more]

BLAST of MELO3C006709 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076934\|ref\|XP_008438943.1\|	6.4e-145	99.60	PREDICTED: bromodomain and WD repeat-containing protein 1 isoform X1 [Cucumis me...	[more]
gi\|778679054\|ref\|XP_011651081.1\|	2.0e-143	98.40	PREDICTED: bromodomain and WD repeat-containing protein 1 isoform X1 [Cucumis sa...	[more]
gi\|700202028\|gb\|KGN57161.1\|	2.0e-143	98.40	hypothetical protein Csa_3G166260 [Cucumis sativus]	[more]
gi\|703091290\|ref\|XP_010094309.1\|	9.6e-101	72.62	Bromodomain and WD repeat-containing protein 1 [Morus notabilis]	[more]
gi\|641853038\|gb\|KDO71897.1\|	1.1e-99	71.31	hypothetical protein CISIN_1g0002511mg, partial [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006709T1	MELO3C006709T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16266	WD REPEAT DOMAIN 9	coord: 35..250 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006709	Cla021787	Watermelon (97103) v1	mewmB461
MELO3C006709	Cucsa.252600	Cucumber (Gy14) v1	cgymeB439

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006709	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006709	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006709	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006709	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006709	Wild cucumber (PI 183967)	cpimeB230
MELO3C006709	Cucumber (Chinese Long) v2	cumeB236
MELO3C006709	Watermelon (Charleston Gray)	mewcgB427
MELO3C006709	Watermelon (Charleston Gray)	mewcgB442
MELO3C006709	Watermelon (97103) v1	mewmB486
MELO3C006709	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006709	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006709	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006709	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006709	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006709	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006709	Cucumber (Gy14) v2	cgybmeB200
MELO3C006709	Silver-seed gourd	carmeB0074
MELO3C006709	Silver-seed gourd	carmeB0280
MELO3C006709	Silver-seed gourd	carmeB0701
MELO3C006709	Silver-seed gourd	carmeB0934
MELO3C006709	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006709	Watermelon (97103) v2	mewmbB434
MELO3C006709	Watermelon (97103) v2	mewmbB448
MELO3C006709	Wax gourd	mewgoB519
MELO3C006709	Wax gourd	mewgoB529
MELO3C006709	Melon (DHL92) v3.5.1	memeB051
MELO3C006709	Melon (DHL92) v3.5.1	memeB113
MELO3C006709	Cucurbita maxima (Rimu)	cmameB242
MELO3C006709	Cucurbita maxima (Rimu)	cmameB342
MELO3C006709	Cucurbita maxima (Rimu)	cmameB763
MELO3C006709	Cucurbita maxima (Rimu)	cmameB850