MELO3C006652 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006652
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4825562 .. 4826650 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCGCCAGTCTTTTCTCAAGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCGGAGATTGTATCATCTCCCACATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTTAAGAATAAACGGAAGGATGTATTTTCGTTCTTTGAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCCAAATTGTTGTTTTTTCAATCAAAAGGTCTTTCTTCCCCAGAGGTCACCAAATTAGTATGTTCGTTTCCTCGTGTCTTCATAGGAAGTTTAAACAAACGAATTATTCCTAATTTTAATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGCGTATTCTCGCTGGGGATCTTCGACTTTCAGTTGGTCCCAATATTGAAAGTCTGAAACAATTTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGACGTTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGCTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTTGCTGCTAAGGTTCTGCAAGAAATAACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAAATCCGTTTAATTTTTAGAAAGAATCCACGGTGTATGACATTTTCTGAGGATAAGATTAATGATACAATAGATTTTTTTGTCAACAAAATTGGATGGGAATCATCTTTCATTGCTAGAAGACCAACTTTAATTACATATAGTCTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCAGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGTTTCGTTCTTTGAGTCTCCTGAAAACAGTTTCATAGAAAAATTCATCAACCCTCAAATTTTAGGAGTTTTCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAA

mRNA sequence

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCGCCAGTCTTTTCTCAAGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCGGAGATTGTATCATCTCCCACATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTTAAGAATAAACGGAAGGATGTATTTTCGTTCTTTGAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCCAAATTGTTGTTTTTTCAATCAAAAGGTCTTTCTTCCCCAGAGGTCACCAAATTAGTATGTTCGTTTCCTCGTGTCTTCATAGGAAGTTTAAACAAACGAATTATTCCTAATTTTAATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGCGTATTCTCGCTGGGGATCTTCGACTTTCAGTTGGTCCCAATATTGAAAGTCTGAAACAATTTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGACGTTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGCTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTTGCTGCTAAGGTTCTGCAAGAAATAACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAAATCCGTTTAATTTTTAGAAAGAATCCACGGTGTATGACATTTTCTGAGGATAAGATTAATGATACAATAGATTTTTTTGTCAACAAAATTGGATGGGAATCATCTTTCATTGCTAGAAGACCAACTTTAATTACATATAGTCTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCAGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGTTTCGTTCTTTGAGTCTCCTGAAAACAGTTTCATAGAAAAATTCATCAACCCTCAAATTTTAGGAGTTTTCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAA

Coding sequence (CDS)

ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCGCCAGTCTTTTCTCAAGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCGGAGATTGTATCATCTCCCACATCTGCTCCGTTGGCTTCTAATGCTGTTCAGCTTAAGAATAAACGGAAGGATGTATTTTCGTTCTTTGAGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTATCCTCAAATTCTTTCTGCGAACCCCGAGAAAACCCTACTGCCCAAATTGTTGTTTTTTCAATCAAAAGGTCTTTCTTCCCCAGAGGTCACCAAATTAGTATGTTCGTTTCCTCGTGTCTTCATAGGAAGTTTAAACAAACGAATTATTCCTAATTTTAATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAGCGCTTTGCGCGTATTCTCGCTGGGGATCTTCGACTTTCAGTTGGTCCCAATATTGAAAGTCTGAAACAATTTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGACGTTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGCTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTGTTGTTGCTGCTAAGGTTCTGCAAGAAATAACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAAATCCGTTTAATTTTTAGAAAGAATCCACGGTGTATGACATTTTCTGAGGATAAGATTAATGATACAATAGATTTTTTTGTCAACAAAATTGGATGGGAATCATCTTTCATTGCTAGAAGACCAACTTTAATTACATATAGTCTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCAGTCAAAGGGTTTGATTAAGAAACACGAGAATCTTGTTTCGTTCTTTGAGTCTCCTGAAAACAGTTTCATAGAAAAATTCATCAACCCTCAAATTTTAGGAGTTTTCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAA

Protein sequence

MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINPQILGVFRFLDCWSCINRN*

Homology

[Close]

BLAST of MELO3C006652 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 7.6e-79
Identity = 155/301 (51.50%), Postives = 207/301 (68.77%), Query Frame = 1


Query: 57  NKRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLV 116
           +K   V +FF +HGFS+SQIS + K  P++L+++P+KTLLPKL FF SKG S P+V K+V
Sbjct: 78  DKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIV 137

Query: 117 CSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQ 176
            S P +   SL  +IIP+FN+ +  L S+E  +  IKRF+RIL  DL   V  NI +L++
Sbjct: 138 VSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQE 197

Query: 177 FGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTW 236
           FGVP SNI   L  +P  F+     F+E +E   +MGFNP QM+FV+A   ++ + KSTW
Sbjct: 198 FGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTW 257

Query: 237 DKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLI 296
           ++K++ Y++WG SEEEIRL F K PRCMT SEDKI  T+DFFVNK+G ESS IARRP LI
Sbjct: 258 ERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLI 317

Query: 297 TYSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFIN------PQILGVF 352
             SL+KRI+PR  V QVL SKGLIK   +LV  FES E  F+ KF+N      PQ++ ++
Sbjct: 318 PLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLY 377

[Close]

BLAST of MELO3C006652 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-76
Identity = 146/286 (51.05%), Postives = 201/286 (70.28%), Query Frame = 1


Query: 58  KRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVC 117
           K   V +FF +HGFS+SQ S + K  P++L+++P+KTLLPKL FF SKG S P+V K+V 
Sbjct: 85  KPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKGASKPDVAKIVV 144

Query: 118 SFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQF 177
           S P +   SL  +IIP+FN+++  L S+E  +  +KRF+RIL  DL   V  N+ +L++F
Sbjct: 145 STPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTYVASNMNALQEF 204

Query: 178 GVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWD 237
           GVP SNI   L Y+P  F+ N   F++ +E   +MGFNP QM+FV+A + ++   +S W+
Sbjct: 205 GVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQAMRAGGESCWE 264

Query: 238 KKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLIT 297
           +K+++Y+KWG SEEEIRL F K+P CM +SEDKI   +DFFVNK+G ESS IA RP LI 
Sbjct: 265 RKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRESSLIAHRPFLIG 324

Query: 298 YSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFIN 344
            SL+KRI+PR  V QVL SKGLI K  +LV  FES E +F+E+F+N
Sbjct: 325 LSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLERFVN 370

[Close]

BLAST of MELO3C006652 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72
Identity = 159/350 (45.43%), Postives = 223/350 (63.71%), Query Frame = 1


Query: 9   LLLRSPSPVFSQGFSESPLK-SLRYLSTSSEIVSSPTSAPLASNAVQLK--NKRKDVFSF 68
           L L S S   S   SE P   ++ YL  S  +  S   A  AS  V  +  +K   V + 
Sbjct: 416 LYLFSSSSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFETPDKPNSVLAL 475

Query: 69  FENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFPRVFIG 128
           F +HGFS++Q S + K+ PQ+L ++P+KTLLPKL FF SKG S P++ K+V   P +   
Sbjct: 476 FNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKR 535

Query: 129 SLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNIL 188
           SL  +IIP+FN+ +  L S++  +  +KRF+RIL  DL   V  N+ +L++FGVP SNI 
Sbjct: 536 SLENQIIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIA 595

Query: 189 KYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKVEVYRK 248
             L  QP  F+     F+E +E   +MG NP QM+FV+A + ++   KS+W++K+++Y++
Sbjct: 596 GLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKR 655

Query: 249 WGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRIL 308
           WG SEEEIRL F K+P CM +SEDKI  T+DFFVNK+G ESS IARRP LI+ SL+KRI+
Sbjct: 656 WGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRII 715

Query: 309 PRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFIN------PQILGV 350
           PR  V QVL SKGLI K  +L + F+S E  F+ KF++      PQ+L +
Sbjct: 716 PRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNL 763

HSP 2 Score: 291.2 bits (744), Expect = 1.7e-75
Identity = 144/300 (48.00%), Postives = 207/300 (69.00%), Query Frame = 1


Query: 58  KRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVC 117
           K   V +FF +HGFS++Q S + K  PQ+L ++P+KTLLPKL FF SKG S P+V K+V 
Sbjct: 82  KPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKLQFFYSKGTSKPDVAKIVA 141

Query: 118 SFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQF 177
           S P +   SL  ++IP++N+ +  L S++  +  +KRF+RIL  D+   V  N+ +L++F
Sbjct: 142 SSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRILLFDIHTYVASNMNALQEF 201

Query: 178 GVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWD 237
           GVP SNI   L+ QP  F+     F+E +E   +MGFNP QM+FV+A + ++   KS+W+
Sbjct: 202 GVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKSSWE 261

Query: 238 KKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLIT 297
           +K+++Y+ WG SEEEIRL F K+P CM +SEDKI  T+DFFVNK+G ESS IARRP LI+
Sbjct: 262 RKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFVNKMGRESSLIARRPVLIS 321

Query: 298 YSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFIN------PQILGVFR 352
           +SL+KRI+PR  V QVL SKGLI K  +L + F+S E  F+ KF+N      PQ++ +++
Sbjct: 322 HSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLHKFVNVYKEEAPQLMKLYQ 381

[Close]

BLAST of MELO3C006652 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.6e-73
Identity = 157/359 (43.73%), Postives = 225/359 (62.67%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKN--K 60
           + +L   + L  S S   S      P  ++ YL  S  +  S   A  AS  V  ++  K
Sbjct: 29  LHFLLDHLYLFSSSSTSISTSEKPHPF-TVSYLINSCGL--SHKDARSASKYVHFESPDK 88

Query: 61  RKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCS 120
              V + F +HGFS++Q S + K+ PQ+L ++P+KTLLPKL FF SKG S P++ K+V  
Sbjct: 89  PNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVC 148

Query: 121 FPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFG 180
            P +   SL  +IIP+FN+ +  L S++  +  +KRF+RIL  DL   V  N+ +L++FG
Sbjct: 149 SPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFG 208

Query: 181 VPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDK 240
           VP SNI   L  QP  F+     F+E +E    MGFNP QM+FV+A + ++   K +W++
Sbjct: 209 VPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWER 268

Query: 241 KVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITY 300
           K+++Y++WG SEEEIRL F K+P CM +SEDKI  T+DFFVNK+G ESS IARRP LI+ 
Sbjct: 269 KIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISP 328

Query: 301 SLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFIN------PQILGVFR 352
           SL+KRI+PR  V QVL SKGLI K  +L + F+S E  F+ KF++      PQ+L +++
Sbjct: 329 SLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQ 384

[Close]

BLAST of MELO3C006652 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.6e-73
Identity = 150/318 (47.17%), Postives = 210/318 (66.04%), Query Frame = 1


Query: 42  SPTSAPLASNAVQLKNKRK--DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKL 101
           S  +A  AS  +  K   K   VF+FF +HGFSESQ S + +  PQ+L ++P+K+LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEVTKLVCSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARIL 161
            FF SKG S+P+V K++ S P +   SL  +IIP+FN+ +    SEE T+A +KRF+R+L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 AGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQM 221
             +  + V  NI +L++ GVP SNI   L  QPR F+     F+E +E   +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFV 281
           +F  A + +  ++KSTW++K++ Y++WG SEE+I L F K+P CM +SEDKI  T+DFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIE 341
           NK+G ESS IA RP LI  SL+KRI+PR  V QVL SKGLI K  +LV  FES E  F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFIN------PQILGVFR 352
           KF+N      PQ+L +++
Sbjct: 360 KFVNGYKEEAPQLLNLYQ 377

[Close]

BLAST of MELO3C006652 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-56
Identity = 123/317 (38.80%), Postives = 188/317 (59.31%), Query Frame = 1


Query: 29  SLRYLSTSSEIVSSPTSAPLASNAVQLKNKRKD--VFSFFENHGFSESQISDLDKRYPQI 88
           +L YL  S  +  SP SA +AS  + L +  +   V +   +HGF+ +QIS L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFPRVFIGSLNKRIIPNFNYIQAVLGSEE 148
           L AN E  LLPKL FF S G+S   + + + S P +   SL  ++IP++N++++VL S+E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLTNSIRFKETV 208
           K +AA++R   +   D   ++ PNI  + + GVP+  I   L + P   +  +  F+   
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERATEMGFNPQQMQFVVAAKVLQ-EITKSTWDKKVEVYRKWGLSEEEIRLIFRKNPRCMT 268
           ++A EMGFNPQ+  FV+A   L  +  KS WDK  EVY++WG SE++I   F+K+P CM 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 FSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSKGLIKKHEN 328
            SE KIN T+++FVN++      IA+ P ++ +SL+KRI+PR  V +VL S GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 LVSFFESPENSFIEKFI 343
           L S     E  F+EK +
Sbjct: 371 LTSLLVPVEKVFLEKLV 385

[Close]

BLAST of MELO3C006652 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-47
Identity = 109/347 (31.41%), Postives = 189/347 (54.47%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESP--LKSLRYLSTSSEIVSSPTSAPLASNAVQLKNK 60
           + +L  RI  L S S V S+   +    L+S            S  SA   S  V+L + 
Sbjct: 26  LGFLVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSS 85

Query: 61  RK--DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLV 120
           +K   V + F++HGF+  QI+ + K +P++LS +PE  + PKL+FF S G S+ +  K++
Sbjct: 86  KKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMI 145

Query: 121 CSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQ 180
            S P++   SL+KR+IP ++ ++++L  EE  +  +KR  R  +  +   V   +   ++
Sbjct: 146 SSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRE 205

Query: 181 FGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTW 240
            GVPD +I   +Q  P  F +   RF E + R    GF+P++  FV A       ++S  
Sbjct: 206 LGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAM 265

Query: 241 DKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLI 300
           ++K ++++ +G S+E+      + P C+T S++KI  T+++ VN IG ++  I  RP ++
Sbjct: 266 ERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVL 325

Query: 301 TYSLKKRILPRGYVYQVLQSKGLIKKHE-NLVSFFESPENSFIEKFI 343
           + S++KRI PR  V  +L SKGL+KK + N  +  +   + F++KF+
Sbjct: 326 SLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFV 372

[Close]

BLAST of MELO3C006652 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 158.3 bits (399), Expect = 8.9e-39
Identity = 95/308 (30.84%), Postives = 168/308 (54.55%), Query Frame = 1


Query: 43  PTSAPLASNAVQLKN--KRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLL 102
           P +  +A     LK+  + + V    +++ FS++QI    + +P+++  N EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPEVTKLVCSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFAR--I 162
           FF+  G +   + K V     V   SL K++IP    +++++  + + L  I       +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQ 222
           L+ D  L + PNI  L+  G+  S +   L+ QPR F  +  + +  V RA ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 MQFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFF 282
              V A   L  +++ T+D+KV+++   G SE+EI  I R++P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSKGLI----KKHENLVSFFESPE 342
           + ++G E   +A+RP +++Y+L+KR++PR  V Q+L+ KGL+    KK +N+V   E  E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

HSP 2 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 35/134 (26.12%), Postives = 59/134 (44.03%), Query Frame = 1


Query: 10  LLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRKDVFS----F 69
           LLR    +F+   SE  L+   Y+S + ++  +  S  L    + L +  +  F      
Sbjct: 201 LLRRQPRIFN--LSEEKLRG--YVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKL 260

Query: 70  FENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFPRVFIG 129
           F  +GFSE +I+D+ +R P ++  + +K  L    + +  GL    + K  C    V   
Sbjct: 261 FMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPC----VLSY 320

Query: 130 SLNKRIIPNFNYIQ 140
           +L KR+IP    +Q
Sbjct: 321 NLEKRVIPRLKVLQ 326

[Close]

BLAST of MELO3C006652 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-26
Identity = 73/224 (32.59%), Postives = 124/224 (55.36%), Query Frame = 1


Query: 56  KNKRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKL 115
           KN    V +   +HGF+ SQIS + + YPQ+L A+ EK+L PKL F QS+G SS E+T++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSFPRVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLK 175
           V S P +     +K I   +++I+  L   EK+    K    +  G+L   +  N+  L+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKI-RNVSVLR 200

Query: 176 QFGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKST 235
           + G+P   +L  L     + +    +F+ET+++  EMGF+P   +FV A +V+ ++ + T
Sbjct: 201 ELGMP-HKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKT 260

Query: 236 WDKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFV 280
            ++KV +Y+  G    ++   F+K P  +  SE K+ D+I+ F+
Sbjct: 261 IEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

HSP 2 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 65/265 (24.53%), Postives = 113/265 (42.64%), Query Frame = 1


Query: 65  FFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVC-SFPRVF 124
           F ++ G S S+I+++    P+IL     KT+     F +   L      + +C S P+  
Sbjct: 126 FLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ-- 185

Query: 125 IGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPN-----IESLKQFG 184
            G+L  +I  N + ++  LG   K L ++      L  D +   G       ++ + + G
Sbjct: 186 -GNLENKI-RNVSVLRE-LGMPHKLLFSL------LISDSQPVCGKEKFEETLKKVVEMG 245

Query: 185 VPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQM--QFVVAAKVLQEITKSTW 244
             D    K+++     +  N    +E V     +GF+   +   F      L+   K   
Sbjct: 246 F-DPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKML 305

Query: 245 DKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLI 304
           D  +E +   G S +E   + +  P C+  S + +    +F V K+ W    +   P + 
Sbjct: 306 DS-IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVF 365

Query: 305 TYSLKKRILPRGYVYQVLQSKGLIK 322
            YSL+KRI+PRG V + L SKGL++
Sbjct: 366 GYSLEKRIVPRGNVIKALMSKGLMR 377

[Close]

BLAST of MELO3C006652 vs. TAIR10
Match: AT1G61980.1 (AT1G61980.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-26
Identity = 86/294 (29.25%), Postives = 152/294 (51.70%), Query Frame = 1


Query: 56  KNKRKDVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKL 115
           K+    V +   +HGF++SQIS +   YPQ+L A+ EK+L PKL F QS+G SS E+T++
Sbjct: 81  KDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEI 140

Query: 116 VCSFPRVFIGSLNKRIIPNFNYI-QAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESL 175
           V + P++     +K I   +++I + +L    K+  + + F +   G+L   +  N+  L
Sbjct: 141 VSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQ---GNLENKI-RNLSVL 200

Query: 176 KQFGVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKS 235
           ++ G+P   +L  L       +    +F+E++++  EMGF+P   +FV A  V+Q ++  
Sbjct: 201 RELGMP-HKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDK 260

Query: 236 TWDKKVEVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPT 295
             + KV  Y++ G   E +  +F++ P  +T SE KI +TI+ F+  +G+          
Sbjct: 261 NIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLG-LGFSRD------- 320

Query: 296 LITYSLKKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINPQILG 349
              +S+  +  P+G     L ++ + KK E LV     P  + +    NP +LG
Sbjct: 321 --EFSVLIKRFPQGI---GLSAEMVKKKTEFLVKKMNWPLKALVS---NPAVLG 353

HSP 2 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 71/290 (24.48%), Postives = 130/290 (44.83%), Query Frame = 1


Query: 65  FFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCS-FPRVF 124
           F ++ G S S+++++    P+IL     KT+     F +   L     ++  C  FP+  
Sbjct: 126 FLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQ-- 185

Query: 125 IGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIE-SLKQ-----F 184
            G+L  +I  N + ++  LG   K L     F  +++ D+ +      E SLK+     F
Sbjct: 186 -GNLENKI-RNLSVLRE-LGMPHKLL-----FPLLISCDVPVFGKEKFEESLKKVVEMGF 245

Query: 185 GVPDSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWD 244
               S  ++ L    R    N    ++ V     +GF+ + + + V  +    +T S  +
Sbjct: 246 DPSTSKFVEALCVVQRLSDKN---IEDKVNAYKRLGFDVEYV-WTVFKRWPNFLTHS--E 305

Query: 245 KKV----EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRP 304
           KK+    E +   G S +E  ++ ++ P+ +  S + +    +F V K+ W    +   P
Sbjct: 306 KKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNP 365

Query: 305 TLITYSLKKRILPRGYVYQVLQSKGLIKKHENLVS-FFESPENSFIEKFI 343
            ++ YSL+KR +PRG V Q L SKGLI      +S  F   +  F+ +++
Sbjct: 366 AVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYV 399

[Close]

BLAST of MELO3C006652 vs. NCBI nr
Match: gi|659076755|ref|XP_008438850.1| (PREDICTED: uncharacterized protein LOC103483822 isoform X2 [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 9.0e-158
Identity = 287/345 (83.19%), Postives = 306/345 (88.70%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRK 60
           MSYLFRRILLLRSPS VFS GFSE PLKSLR+LSTSSE+VSSP SA LASNAV LKN RK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEVVSSPKSASLASNAVWLKNNRK 60

Query: 61  DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFP 120
           DV +   NHGFS+SQISDL KR PQI SANPE++LLPKLLF QSKGLSSP++ K VC+FP
Sbjct: 61  DVIALLANHGFSQSQISDLAKRLPQIFSANPEESLLPKLLFLQSKGLSSPQIVKSVCAFP 120

Query: 121 RVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVP 180
            V  GSLNKRIIP F+YIQAVLG+EEK +AAIKRFA IL  DLR+SVGPNIE LKQ GVP
Sbjct: 121 CVLTGSLNKRIIPAFDYIQAVLGTEEKAVAAIKRFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKV 240
           DSNI  YLQ QPR F  +SIRFKE VER TEMGFNPQ++QF+VA   L+ +TKSTWDKKV
Sbjct: 181 DSNISTYLQQQPRMFFVSSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300
           EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL
Sbjct: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300

Query: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINPQ 346
           KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINPQ
Sbjct: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINPQ 345

[Close]

BLAST of MELO3C006652 vs. NCBI nr
Match: gi|659077777|ref|XP_008439380.1| (PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 9.3e-147
Identity = 270/344 (78.49%), Postives = 297/344 (86.34%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRK 60
           M  LFRR +LLR  S VFS GFSE PLKSLRYLSTSS+IVSSPTSAPLASNA+QLKNKRK
Sbjct: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60

Query: 61  DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFP 120
            V +   +HGFSESQISDLDKR+PQILSANPEK+LLPKLLFFQSKGLSSPE+ KLVCSFP
Sbjct: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 RVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVP 180
           RV  GSL+KRIIP F+YIQAVLGSEEKTLA+IK+FA IL  DLR+S GPNIE LKQ GVP
Sbjct: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKV 240
           DSNI KYLQYQPR FL N +RFKETVER TEMGFNPQQ+QFVVA  +L+ +TKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300
           EVYRKWGLSEEEI L FR++P  M  SEDKIN  +DFFVNK+G E+SF ARRP L++ SL
Sbjct: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINP 345
           KKRILPRGYVYQVL SKGLIKKH+NL+ FFES EN FIEKFINP
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINP 344

[Close]

BLAST of MELO3C006652 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144
Identity = 268/344 (77.91%), Postives = 291/344 (84.59%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRK 60
           MS +FRRILLLRSPSPVF QGFS+SPLKSLRYLSTSSEIVSSP SAPLASNAVQLKNKRK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFP 120
            V +   +HGFSESQIS +DKRYPQILSANPEK LLPKLLFFQSKGLSSPE+ KLVCSFP
Sbjct: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 RVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVP 180
           RV  GSL+ RIIP F+YIQAVLGSEEKTLA IK F  IL  DLR+SVGPNIE LKQ GVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKV 240
           DSNILKY QYQPR F  NSIRFKETVER TEMGFNPQ++QF+VA   L+ +TKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300
           EVYRKWGLSEEEI L F+++P CM  SEDKIN  +DFFVNKIG ESSF+ARRP LI+ SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINP 345
           KKR+ PRGYVYQVL  KGLIKK  N+  F  S EN FI+KFINP
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINP 344

[Close]

BLAST of MELO3C006652 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 520.4 bits (1339), Expect = 2.5e-144
Identity = 267/344 (77.62%), Postives = 290/344 (84.30%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRK 60
           MS LFRRILLLRSPS VFS GFSE PLKSLR+LSTSSEIVSSP SA LASN VQ+KN RK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFP 120
             FSFFENHGFSESQISD+DK++PQILSANPEK LLPKLLFFQSKGLSSPE+ KLVCSFP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 RVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVP 180
           RV  GSL+ RIIP F+YIQAVLGSEEKTLA IK F  IL  DLR+SVGPNIE LKQ GVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKV 240
           DSNILKY QYQPR F  NSIRFKETVER TEMGFNPQ++QF+VA   L+ +TKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300
           EVYRKWGLSEEEI L F+++P CM  SEDKIN  +DFFVNKIG ESSF+ARRP LI+ SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINP 345
           KKR+ PRGYVYQVL  KGLIKK  N+  F  S EN FI+KFINP
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINP 344

[Close]

BLAST of MELO3C006652 vs. NCBI nr
Match: gi|659076763|ref|XP_008438854.1| (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 519.2 bits (1336), Expect = 5.7e-144
Identity = 269/357 (75.35%), Postives = 291/357 (81.51%), Query Frame = 1


Query: 1   MSYLFRRILLLRSPSPVFSQGFSESPLKSLRYLSTSSEIVSSPTSAPLASNAVQLKNKRK 60
           MS LFRRILLLRSPS  FS GFSE PLK LRYLSTSSEIVSSP SA LASNAVQLKN  K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  DVFSFFENHGFSESQISDLDKRYPQILSANPEKTLLPKLLFFQSKGLSSPEVTKLVCSFP 120
            + +   NHGFSESQISD+ KR  +IL  NPEK L PKLLFFQSKGLSSPE+ KLVCS P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 RVFIGSLNKRIIPNFNYIQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVP 180
            V  GSLNKRIIPNF+Y+QAV GSEEKTL  IKRFA ILA DLR+SVGPNIE LKQ GVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRRFLTNSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKV 240
           DSNI KYLQYQPR FL N +RFKE VER  EMGFNPQQ+QFVVA  +L+ +TKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEIRLIFRKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSL 300
           EVYRKWGLSEEEIR+ FRK+P CM FSEDKIN  +DFFVNK+G ESSF ARRP L++ SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLQSKGLIKKHENLVSFFESPENSFIEKFINP---QILGVFRFLD 355
           KKRILPRGY+YQVL SKGLIKKHENL  FFESPE  FIEKFINP   QI G+    +
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYE 357

The following BLAST results are available for this feature:

BLAST of MELO3C006652 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	7.6e-79	51.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
F6HDG2_VITVI	6.0e-76	51.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	1.8e-72	45.43	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5C3X9_VITVI	1.6e-73	43.73	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]
A5B1K5_VITVI	3.6e-73	47.17	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]

BLAST of MELO3C006652 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	2.1e-56	38.80	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.1e-47	31.41	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	8.9e-39	30.84	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	3.0e-26	32.59	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	5.1e-26	29.25	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006652 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076755\|ref\|XP_008438850.1\|	9.0e-158	83.19	PREDICTED: uncharacterized protein LOC103483822 isoform X2 [Cucumis melo]	[more]
gi\|659077777\|ref\|XP_008439380.1\|	9.3e-147	78.49	PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo]	[more]
gi\|659076750\|ref\|XP_008438848.1\|	1.1e-144	77.91	PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo]	[more]
gi\|659076738\|ref\|XP_008438842.1\|	2.5e-144	77.62	PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo]	[more]
gi\|659076763\|ref\|XP_008438854.1\|	5.7e-144	75.35	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006652T1	MELO3C006652T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..278 score: 7.2E-30coord: 233..334 score: 4.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..108 score: 0.0084coord: 149..180 score: 130.0coord: 254..285 score: 9.1E-4coord: 286..320 score: 0.24coord: 185..215 score: 2600.0coord: 113..145 score:
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..344 score: 5.2E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..344 score: 5.2E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006652	Cucurbita maxima (Rimu)	cmameB242
MELO3C006652	Cucurbita maxima (Rimu)	cmameB342
MELO3C006652	Cucurbita maxima (Rimu)	cmameB763
MELO3C006652	Cucurbita maxima (Rimu)	cmameB850
MELO3C006652	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006652	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006652	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006652	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006652	Wild cucumber (PI 183967)	cpimeB230
MELO3C006652	Wild cucumber (PI 183967)	cpimeB501
MELO3C006652	Cucumber (Chinese Long) v2	cumeB236
MELO3C006652	Cucumber (Chinese Long) v2	cumeB499
MELO3C006652	Watermelon (Charleston Gray)	mewcgB427
MELO3C006652	Watermelon (Charleston Gray)	mewcgB442
MELO3C006652	Watermelon (97103) v1	mewmB486
MELO3C006652	Watermelon (97103) v1	mewmB461
MELO3C006652	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006652	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006652	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006652	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006652	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006652	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006652	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006652	Cucumber (Gy14) v2	cgybmeB200
MELO3C006652	Silver-seed gourd	carmeB0074
MELO3C006652	Silver-seed gourd	carmeB0610
MELO3C006652	Silver-seed gourd	carmeB0701
MELO3C006652	Silver-seed gourd	carmeB0828
MELO3C006652	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006652	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006652	Watermelon (97103) v2	mewmbB434
MELO3C006652	Watermelon (97103) v2	mewmbB448
MELO3C006652	Wax gourd	mewgoB521
MELO3C006652	Wax gourd	mewgoB529
MELO3C006652	Melon (DHL92) v3.5.1	memeB051
MELO3C006652	Cucumber (Gy14) v1	cgymeB307
MELO3C006652	Cucumber (Gy14) v1	cgymeB439