MELO3C006640 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006640
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4750648 .. 4751325 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

ATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGA

Coding sequence (CDS)

ATGCTTGGAAGTGAGGAGAAGACTCTCGTTGCCATAAAGCGCTTTGCGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAGTATTGAAATTCTGAAACAAAGTGGTGTGCCGGATTCAAATATTTTAAAATATCTTCAGTTCCAGCCTAGACTGTTCTTGACAAATCCCATCCGATTCAAGGAGAGTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAAATGCAGTTTCTTGTTGCTGTGTTTGCTCTGCGTTCAATGACCAAATCTACGTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGGTCCGTTTAGCATTTAGAAGGTATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGATGTAATGGATTTTTTTGTCAACAAAATTGGATGCGAATCATCTTTCGCTGCTAGAAGACCAATTTTAATTTACCGTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAATCACAAGAATCTTGTTTTGTTCTTTGAGTCTCCCGAAAAGCCTTTCATAGAAAAATTCATCAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAAGAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR*

Homology

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BLAST of MELO3C006640 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 119/224 (53.12%), Postives = 161/224 (71.88%), Query Frame = 1


Query: 2   LGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 61
           L S+E  +  IKRF+ IL +DL      +I  L++ GVP SNI   L  +P  F+  P  
Sbjct: 163 LQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNL 222

Query: 62  FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 121
           F+E++E V +MGFNP QM+F++A+ A+R+M KSTW++K++ Y++WG SEEE+RLAF + P
Sbjct: 223 FRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLP 282

Query: 122 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 181
            CM  SEDKI   MDFFVNK+G ESS  ARRP+LI  SL+KRI+PR  V QVLLSKGLIK
Sbjct: 283 RCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIK 342

Query: 182 NHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           N  +LV+ FES EK F+ KF+N  KE+ P L++LY+EK+  S++
Sbjct: 343 NDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKINLSKK 386

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BLAST of MELO3C006640 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 112/219 (51.14%), Postives = 157/219 (71.69%), Query Frame = 1


Query: 2   LGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 61
           L S++  +  +KRF+ IL +D+      ++  L++ GVP SNI   L+ QP  F+  P  
Sbjct: 166 LQSDKMAITVVKRFSRILLFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNL 225

Query: 62  FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 121
           F+E++E V +MGFNP QM+F++AV A+R+  KS+W++K+++Y+ WG SEEE+RLAF + P
Sbjct: 226 FRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSP 285

Query: 122 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 181
           WCMI SEDKI   MDFFVNK+G ESS  ARRP+LI  SL+KRI+PR  V QVLLSKGLI 
Sbjct: 286 WCMIYSEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLID 345

Query: 182 NHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKL 221
              +L   F+S EK F+ KF+N +KE+ P L++LY+EK+
Sbjct: 346 KDFSLPTVFQSTEKMFLHKFVNVYKEEAPQLMKLYQEKI 384

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BLAST of MELO3C006640 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.1e-57
Identity = 115/217 (53.00%), Postives = 152/217 (70.05%), Query Frame = 1


Query: 4   SEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFK 63
           SEE T+  +KRF+ +L  +  I    +I  L++SGVP SNI   L  QPR F+  P  F+
Sbjct: 164 SEEMTMATVKRFSRVLIVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFR 223

Query: 64  ESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWC 123
           E +E V +MGF+P + +F  AV A+  M+KSTW++K++ Y++WG SEE++ LAF + PWC
Sbjct: 224 EILEEVKKMGFDPSKTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWC 283

Query: 124 MIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH 183
           MI SEDKI   MDFFVNK+G ESS  A RP LI  SL+KRI+PR  V QVLLSKGLI   
Sbjct: 284 MIYSEDKIMATMDFFVNKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKD 343

Query: 184 KNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKL 221
            +LV+ FES EK F+EKF+N +KE+ P LL LY+EK+
Sbjct: 344 ISLVVLFESTEKMFLEKFVNGYKEEAPQLLNLYQEKV 380

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BLAST of MELO3C006640 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.3e-56
Identity = 110/214 (51.40%), Postives = 154/214 (71.96%), Query Frame = 1


Query: 2   LGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 61
           L S+E  +  +KRF+ IL +DL      ++  L++ GVP SNI   L ++P  F+ NP  
Sbjct: 169 LQSDEMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNL 228

Query: 62  FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 121
           F++++E V +MGFNP QM+F++A+ A+R+  +S W++K+++Y+KWG SEEE+RLAF + P
Sbjct: 229 FRKNLEEVKKMGFNPSQMKFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSP 288

Query: 122 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 181
           WCMI SEDKI   MDFFVNK+G ESS  A RP LI  SL+KRI+PR  V QVLLSKGLI 
Sbjct: 289 WCMIYSEDKIMAKMDFFVNKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLIN 348

Query: 182 NHKNLVLFFESPEKPFIEKFINPHKEQIPGLLEL 216
              +LV+ FES EK F+E+F+N +KE+ P L++L
Sbjct: 349 KDISLVVLFESTEKTFLERFVNAYKEEAPQLIKL 382

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BLAST of MELO3C006640 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-52
Identity = 107/219 (48.86%), Postives = 151/219 (68.95%), Query Frame = 1


Query: 2   LGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 61
           L S++  +  +KRF+ IL +DL      ++  L++ GVP SNI   L  QP  F+  P  
Sbjct: 550 LQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNL 609

Query: 62  FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 121
           F+E++E V +MG NP QM+F++A+ A+R+  KS+W++K+++Y++WG SEEE+RLAF + P
Sbjct: 610 FRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRLAFTKSP 669

Query: 122 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 181
           WCMI SEDKI   MDFFVNK+G ESS  ARRP LI  SL+KRI+PR  V QVLLSKGLI 
Sbjct: 670 WCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLIS 729

Query: 182 NHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKL 221
              +L   F+S E  F+ KF++ +KE+ P LL L  +++
Sbjct: 730 KDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLEHKEM 768

HSP 2 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 111/219 (50.68%), Postives = 152/219 (69.41%), Query Frame = 1


Query: 2   LGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPIR 61
           L S++  +  +KRF+ IL +DL      ++  L++ GVP SNI   L  QP  F+  P  
Sbjct: 169 LQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNL 228

Query: 62  FKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYP 121
           F+E++E V  MGFNP QM+F++A+ A+R+  K +W++K+++Y++WG SEEE+RLAF + P
Sbjct: 229 FRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSP 288

Query: 122 WCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIK 181
           WCMI SEDKI   MDFFVNK+G ESS  ARRP LI  SL+KRI+PR  V QVLLSKGLI 
Sbjct: 289 WCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLIN 348

Query: 182 NHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKL 221
              +L   F+S E  F+ KF++ +KE+ P LL LY+EKL
Sbjct: 349 KDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQEKL 387

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BLAST of MELO3C006640 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 154.8 bits (390), Expect = 6.2e-38
Identity = 80/217 (36.87%), Postives = 129/217 (59.45%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           +L S+EK + A++R   +   D   +  P+I  + ++GVP+  I   L   P   +    
Sbjct: 183 VLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNH 242

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSM-TKSTWDKKVEVYRKWGLSEEEVRLAFRR 120
            F+   ++  EMGFNPQ+  F++A+ AL     KS WDK  EVY++WG SE+++  AF++
Sbjct: 243 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 302

Query: 121 YPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGL 180
           +P CM+ SE KIN  M++FVN++       A+ P++++ SL+KRI+PR  V +VL+S GL
Sbjct: 303 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 362

Query: 181 IKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELY 217
           +K   +L       EK F+EK +  ++E++P L+ LY
Sbjct: 363 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

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BLAST of MELO3C006640 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 68/217 (31.34%), Postives = 123/217 (56.68%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPS--IEILKQSGVPDSNILKYLQFQPRLFLTN 60
           +L  EE  +  +KR  GI  + L+I+   S  + I ++ GVPD +I   +Q  P  F + 
Sbjct: 170 ILVEEESVVKCLKR--GIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSR 229

Query: 61  PIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFR 120
             RF E + RV   GF+P++  F+ A+ A    ++S  ++K ++++ +G S+E+   A  
Sbjct: 230 ERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIM 289

Query: 121 RYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKG 180
           R+P C+  S++KI   +++ VN IG ++     RP+++  S++KRI PR  V  +LLSKG
Sbjct: 290 RFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKG 349

Query: 181 LIKNHK-NLVLFFESPEKPFIEKFINPHKEQIPGLLE 215
           L+K    N     +     F++KF+  +++++P L++
Sbjct: 350 LVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006640 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 34/104 (32.69%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 30  SIEILKQSGVPDSNILKYL--QFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFA 89
           +I +L++ GVP   +   L  ++QP   +    +F+ES+++V +MGF+P + +F+ A+  
Sbjct: 188 NISVLRELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHV 247

Query: 90  LRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKI 132
           +  M++ T ++KV VY++ G SE E+   F+++P+ +  SE KI
Sbjct: 248 VYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 55.5 bits (132), Expect = 5.1e-08
Identity = 31/130 (23.85%), Postives = 63/130 (48.46%), Query Frame = 1


Query: 88  LRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESS 147
           +RS  +   D  +E++   G S ++ ++  +RYP C   S + +    +  V  +     
Sbjct: 316 IRSSEQKILDS-IEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLE 375

Query: 148 FAARRPILIYRSLKKRILPRGYVYQVLLSKGLI-KNHKNLVLFFESPEKPFIEKFINPHK 207
                P ++  SL+KRI+PR  V + L+SKGLI   +  +       ++ F+++++  H 
Sbjct: 376 AVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHD 435

Query: 208 EQIPGLLELY 217
           + +P L+ ++
Sbjct: 436 KLVPKLMAIF 444

[Close]

BLAST of MELO3C006640 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 1


Query: 98  KKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIY 157
           K V+ + + G +++EV +  +R+P C+  + D +    +F V  +G      A  PI++ 
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 158 RSLKKRILPRGYVYQVLLSKGLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELY 217
            SL+K +LPR  V + L+S GLI     +     SP+  F++ F+  H++ +P L  ++
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

HSP 2 Score: 61.6 bits (148), Expect = 7.1e-10
Identity = 32/102 (31.37%), Postives = 59/102 (57.84%), Query Frame = 1


Query: 30  SIEILKQSGVPDSNILKYLQFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFALR 89
           ++ +L++ GVP   +L  L  + +  +    RF+ESV+++ EMGF+P+  +F+ A++   
Sbjct: 190 NVSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFY 249

Query: 90  SMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKI 132
            ++  T ++KV  Y + GLS  EV   F+++P+ +  SE  I
Sbjct: 250 ELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 3 Score: 34.3 bits (77), Expect = 1.2e-01
Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 1


Query: 98  KKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKI 132
           +K E  ++ GL++EEV L  ++YP C+  SE+KI
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKI 325

[Close]

BLAST of MELO3C006640 vs. TAIR10
Match: AT1G62010.1 (AT1G62010.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 1


Query: 30  SIEILKQSGVPDSNILKYL--QFQPRLFLTNPIRFKESVERVTEMGFNPQQMQFLVAVFA 89
           +I +L++ GVP   +L  L  + QP   +    +F  S+++V EMGF+P    F+ A+  
Sbjct: 176 NILVLRELGVPQKRLLLLLISKSQP---VCGKEKFDASLKKVVEMGFDPTTSTFVHALHM 235

Query: 90  LRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFV 140
           L  M+  T ++K+ VYR  G S ++V   F+++P  +  SE K+ + ++ F+
Sbjct: 236 LYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFL 284

HSP 2 Score: 51.6 bits (122), Expect = 7.3e-07
Identity = 35/125 (28.00%), Postives = 63/125 (50.40%), Query Frame = 1


Query: 89  RSMTKSTWDKKV----EVYRKWGLSEEEVRLAFRRYPWCMIASEDKINDVMDFFVNKIGC 148
           RS+T S  +KKV    E +   G S +   + F+R+P C+  S + +    +F V ++  
Sbjct: 267 RSLTHS--EKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNW 326

Query: 149 ESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLIKNH-KNLVLFFESPEKPFIEKFIN 208
                A  P ++  SL+KR +PR  V +VL+SKGL+++    +     S  + F+  +++
Sbjct: 327 PVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYVS 386

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BLAST of MELO3C006640 vs. NCBI nr
Match: gi|659077777|ref|XP_008439380.1| (PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102
Identity = 186/225 (82.67%), Postives = 207/225 (92.00%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           +LGSEEKTL +IK+FAGIL  DLRISAGP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+
Sbjct: 141 VLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV 200

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRY 120
           RFKE+VERVTEMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+ LAFRR+
Sbjct: 201 RFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRH 260

Query: 121 PWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI 180
           PW M+ SEDKIN  MDFFVNK+GCE+SFAARRPIL+  SLKKRILPRGYVYQVLLSKGLI
Sbjct: 261 PWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLI 320

Query: 181 KNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           K H+NL+LFFES E  FIEKFINPHKEQIPGLLELY++KLMDSRR
Sbjct: 321 KKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR 365

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BLAST of MELO3C006640 vs. NCBI nr
Match: gi|659076763|ref|XP_008438854.1| (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 377.1 bits (967), Expect = 2.2e-101
Identity = 184/225 (81.78%), Postives = 201/225 (89.33%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           + GSEEKTL+ IKRFAGIL WDLRIS GP+IEILKQ GVPDSNI KYLQ+QPR+FL NP+
Sbjct: 141 VFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPV 200

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRY 120
           RFKE+VERV EMGFNPQQ+QF+VAVF LR+MTKSTWDKKVEVYRKWGLSEEE+R+AFR+ 
Sbjct: 201 RFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEIRIAFRKS 260

Query: 121 PWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI 180
           P CM  SEDKIN VMDFFVNK+GCESSFAARRPIL+  SLKKRILPRGY+YQVLLSKGLI
Sbjct: 261 PLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSLKKRILPRGYIYQVLLSKGLI 320

Query: 181 KNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           K H+NL  FFESPEK FIEKFINPH EQI GLLELYEEKL D RR
Sbjct: 321 KKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKLKDYRR 365

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BLAST of MELO3C006640 vs. NCBI nr
Match: gi|778678824|ref|XP_004134480.2| (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 6.5e-98
Identity = 181/225 (80.44%), Postives = 202/225 (89.78%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           +LGSEEKTL  IK+FAGIL+ DLRIS GP+IEILKQ GVPDS+ILKY  +QPR+FLTN I
Sbjct: 141 VLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVPDSSILKYFPYQPRVFLTNSI 200

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRY 120
           RFKE+VERV EMGFNPQQ QF+VAVFALRSMTKSTWDKKVE+ RKWGLSEE++RLAFRR 
Sbjct: 201 RFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKVEILRKWGLSEEDIRLAFRRN 260

Query: 121 PWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI 180
           PWCM  SEDKIN  MDFFVNK+GCESSFAARRP+L+  SLKKRILPRGYVYQVLLSKGLI
Sbjct: 261 PWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSLKKRILPRGYVYQVLLSKGLI 320

Query: 181 KNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           K ++NL LFFESPEK FIEK+INP KEQIP LLELY++KLM+SRR
Sbjct: 321 KKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKLMESRR 365

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BLAST of MELO3C006640 vs. NCBI nr
Match: gi|659076720|ref|XP_008438832.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 6.5e-98
Identity = 178/225 (79.11%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           +LGSEEKTL  IK FAGILT DLRIS GP+IEILKQ GVPDSNI KYLQ++PR+FLTNPI
Sbjct: 141 VLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQYRPRVFLTNPI 200

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRY 120
           RFKE+V+RVTEMGFNPQQ+QF+VAVF LRS+TKSTWDKKVEVYRKWGLSEEE+ LAF+R+
Sbjct: 201 RFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSEEEICLAFKRH 260

Query: 121 PWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI 180
           PWCM+ SEDKIN VMDFFVNKIGCESSF A RP+LI  SLKKRI PRGYVYQVLL+KGLI
Sbjct: 261 PWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYVYQVLLAKGLI 320

Query: 181 KNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           K H ++ +F +  EK FIEK I+PHKEQIPGLLE YE+KLMDSRR
Sbjct: 321 KKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDSRR 365

[Close]

BLAST of MELO3C006640 vs. NCBI nr
Match: gi|659076736|ref|XP_008438841.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 6.5e-98
Identity = 178/225 (79.11%), Postives = 200/225 (88.89%), Query Frame = 1


Query: 1   MLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLTNPI 60
           +LGSEEKTL  IK FAGILT DLRIS GP+IEILKQ GVPDSNI KYLQ++PR+FLTNPI
Sbjct: 141 VLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQYRPRVFLTNPI 200

Query: 61  RFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAFRRY 120
           RFKE+V+RVTEMGFNPQQ+QF+VAVF LRS+TKSTWDKKVEVYRKWGLSEEE+ LAF+R+
Sbjct: 201 RFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSEEEICLAFKRH 260

Query: 121 PWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSKGLI 180
           PWCM+ SEDKIN VMDFFVNKIGCESSF A RP+LI  SLKKRI PRGYVYQVLL+KGLI
Sbjct: 261 PWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYVYQVLLAKGLI 320

Query: 181 KNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 226
           K H ++ +F +  EK FIEK I+PHKEQIPGLLE YE+KLMDSRR
Sbjct: 321 KKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDSRR 365

The following BLAST results are available for this feature:

BLAST of MELO3C006640 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	1.4e-59	53.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5C3Y0_VITVI	1.3e-57	51.14	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
A5B1K5_VITVI	5.1e-57	53.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
F6HDG2_VITVI	4.3e-56	51.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	3.8e-52	48.86	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]

BLAST of MELO3C006640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	6.2e-38	36.87	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.7e-27	31.34	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	1.3e-11	32.69	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.7e-11	28.57	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	1.6e-09	31.25	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077777\|ref\|XP_008439380.1\|	2.0e-102	82.67	PREDICTED: uncharacterized protein LOC103484195 [Cucumis melo]	[more]
gi\|659076763\|ref\|XP_008438854.1\|	2.2e-101	81.78	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
gi\|778678824\|ref\|XP_004134480.2\|	6.5e-98	80.44	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
gi\|659076720\|ref\|XP_008438832.1\|	6.5e-98	79.11	PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo]	[more]
gi\|659076736\|ref\|XP_008438841.1\|	6.5e-98	79.11	PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58401	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006640T1	MELO3C006640T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU58401	MU58401	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 23..180 score: 1.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 45..75 score: 560.0coord: 146..180 score: 270.0coord: 114..145 score: 0
None	No IPR available	unknown	Coil	Coil	coord: 213..225 scor
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..220 score: 1.3
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 1..220 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006640	Cucumber (Gy14) v2	cgybmeB200
MELO3C006640	Silver-seed gourd	carmeB0610
MELO3C006640	Silver-seed gourd	carmeB0828
MELO3C006640	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006640	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006640	Watermelon (97103) v2	mewmbB434
MELO3C006640	Watermelon (97103) v2	mewmbB448
MELO3C006640	Wax gourd	mewgoB521
MELO3C006640	Wax gourd	mewgoB529
MELO3C006640	Melon (DHL92) v3.5.1	memeB051
MELO3C006640	Cucumber (Gy14) v1	cgymeB307
MELO3C006640	Cucumber (Gy14) v1	cgymeB439
MELO3C006640	Cucurbita maxima (Rimu)	cmameB242
MELO3C006640	Cucurbita maxima (Rimu)	cmameB342
MELO3C006640	Cucurbita maxima (Rimu)	cmameB763
MELO3C006640	Cucurbita maxima (Rimu)	cmameB850
MELO3C006640	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006640	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006640	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006640	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006640	Wild cucumber (PI 183967)	cpimeB230
MELO3C006640	Wild cucumber (PI 183967)	cpimeB501
MELO3C006640	Cucumber (Chinese Long) v2	cumeB236
MELO3C006640	Cucumber (Chinese Long) v2	cumeB499
MELO3C006640	Watermelon (Charleston Gray)	mewcgB427
MELO3C006640	Watermelon (Charleston Gray)	mewcgB442
MELO3C006640	Watermelon (97103) v1	mewmB486
MELO3C006640	Watermelon (97103) v1	mewmB461
MELO3C006640	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006640	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006640	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006640	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006640	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006640	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006640	Bottle gourd (USVL1VR-Ls)	lsimeB369