MELO3C006639 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006639
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMitochondrial transcription termination factor family protein, putative
Locationchr6 : 4746613 .. 4748686 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCGATTACATCAAAGTAGCAGAGATTGTGATCAATCGGACGACACCCATTATTGCAAAAGACCCTGAAATACAATTTTGATACGCCCCTTTTCTTTATTGGTGCTTTTCGTGGTTGCATTTCACTTATGAGCTCCATGGTTTTTGAGGTTTTTGTTAGAACATGTAAATTGGAAGAAGACATGGTGGAATTGCTGTCTTTATTATCCTTATTTCCAAAGGTGATGACTATGTTATGAGGGTTGTAATTATTTGTTTATTAATCTTTTGTTTGGAATAATTTTGGGGTTTATCTAATTTTTCTAAAATAAATTTAGTGATGGATGTTCCAACAATTTTTTTCTCAACGAGTTTTCAAAAGGAAAAAAAAAGGAAAAGGAAAAACTATTTTCGATGATTTCCTTTCAAAAGCCCTAACCCCCTCGTTCCTTCCTTTTCTTATTTTCTTTGTTCTCTCTCAGTCTCCCACTCCGCCGCCGCCCATTTTTCTTTTCTTTTCTCTCATAGCTTCATCCTCTTGTGAGTCATTTGAATAAAGTTTCTCCCCTTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTTCACTCATGTCTTACTTGTTTCGCAGAATCCTTTTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGAAGAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGAGCGGGTTCGATCTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGAAATAAACTAAATTTTCTATATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATAGCTAATTGAATGATGACTCCTTAAGAACCGCTTTGCGCCAGGTATTTGGGTACTGTTCCTCTGCTTAACATTGTTGGAGTTATATTATCTGGGTACATGGCTGTTTCTAGTTGGGTTGTCTTGAAGGGTTGTCGTGCAGTGTTGGCCTTCCCTTCTACTGGAGATGCTTTTGTATATCATGATTTGAGTCTTATCTTTTCTAGTACCCTATTTTTACAATTTTTTAAAGAAAAAATATATTATTCT

mRNA sequence

GTCCGATTACATCAAAGTAGCAGAGATTGTGATCAATCGGACGACACCCATTATTGCAAAAGACCCTGAAATACAATTTTGATACGCCCCTTTTCTTTATTGGTGCTTTTCGTGGTTGCATTTCACTTATGAGCTCCATGGTTTTTGAGGTTTTTGTTAGAACATGTAAATTGGAAGAAGACATGGTGGAATTGCTGTCTTTATTATCCTTATTTCCAAAGGTGATGACTATGTTATGAGGGTTGTAATTATTTGTTTATTAATCTTTTGTTTGGAATAATTTTGGGGTTTATCTAATTTTTCTAAAATAAATTTAGTGATGGATGTTCCAACAATTTTTTTCTCAACGAGTTTTCAAAAGGAAAAAAAAAGGAAAAGGAAAAACTATTTTCGATGATTTCCTTTCAAAAGCCCTAACCCCCTCGTTCCTTCCTTTTCTTATTTTCTTTGTTCTCTCTCAGTCTCCCACTCCGCCGCCGCCCATTTTTCTTTTCTTTTCTCTCATAGCTTCATCCTCTTGTGAGTCATTTGAATAAAGTTTCTCCCCTTCTTCTTCTCAACAAGGTACCAACACCTCACTCTTCCTTCTCCTCCCACTTCTTTCACTCATGTCTTACTTGTTTCGCAGAATCCTTTTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGAAGAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGAGCGGGTTCGATCTCCTTGAAACTTAACTGTTTTGTTAGTTGATATGTGTAGAAATAAACTAAATTTTCTATATGCGCAAGAGTTTGTGTTTCTACATTATCACTATTTAGATAGCTAATTGAATGATGACTCCTTAAGAACCGCTTTGCGCCAGGTATTTGGGTACTGTTCCTCTGCTTAACATTGTTGGAGTTATATTATCTGGGTACATGGCTGTTTCTAGTTGGGTTGTCTTGAAGGGTTGTCGTGCAGTGTTGGCCTTCCCTTCTACTGGAGATGCTTTTGTATATCATGATTTGAGTCTTATCTTTTCTAGTACCCTATTTTTACAATTTTTTAAAGAAAAAATATATTATTCT

Coding sequence (CDS)

ATGTCTTACTTGTTTCGCAGAATCCTTTTACTTAGATCTCCATCGTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAATCACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATTGGATGTGAATCATCTTTCGTTGCTAGAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTAGAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAACCCTCATAAGAAGAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYKQKLMDSRR*
Homology
[Close]
BLAST of MELO3C006639 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.6e-07
Identity = 43/190 (22.63%), Postives = 84/190 (44.21%), Query Frame = 1 

Query: 55  LENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAK 114
           L+   K V+E L + G  +S I  I  +RPQI   +    L P + F ++ G+   + AK
Sbjct: 228 LDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAK 287

Query: 115 LVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEIL 174
           ++  FP +LT S  +++    +++     +EE+    + +   I++  ++  + P +E  
Sbjct: 288 IISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYF 347

Query: 175 KQIGVPDSNILKYLQYQPRVFIIS-SIRFKEIVERVTEMGFNPQRLQFLVA------VFA 234
           + + V   ++   L   P+ F +S     K + E   E GF    +  +++       F+
Sbjct: 348 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 407

Query: 235 LRAMTKSTWD 238
           L+      WD
Sbjct: 408 LKENVMPKWD 413

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BLAST of MELO3C006639 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.7e-75
Identity = 151/324 (46.60%), Postives = 216/324 (66.67%), Query Frame = 1 

Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           S K+A  AS  +  +   K  +V     +HGFS+SQ S I R +PQ+L ++P+K LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF SKG S+P++ K++ + P +L  SL  +II +F++ +    SEE T+A +K+F+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             +  I V  NI  L++ GVP SNI   L  QPR F++    F+EI+E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I LAF + PWCM+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL KGLI K  ++ +   S+EK F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPHKKKGEQIPGLLELYKQKL 364
           KF+N +K   E+ P LL LY++K+
Sbjct: 360 KFVNGYK---EEAPQLLNLYQEKV 380

[Close]
BLAST of MELO3C006639 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.5e-74
Identity = 147/324 (45.37%), Postives = 218/324 (67.28%), Query Frame = 1 

Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           S K A  AS  +  E   K  +V+    +HGFS++Q S I +  PQ+L ++P+K LLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF SKG S P++AK+V + P ++  SL  ++I ++++ +  L S++  +  +K+F+ IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             D+   V  N+  L++ GVP SNI   L+ QP  F++    F+E +E V +MGFNP ++
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++AV A+RA  KS+W++K+++Y+ WG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIE 341
           NK+G ESS +ARRP LIS SL+KR+ PR  V QVLL KGLI K  ++P    S+EK F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KFINPHKKKGEQIPGLLELYKQKL 364
           KF+N +K   E+ P L++LY++K+
Sbjct: 364 KFVNVYK---EEAPQLMKLYQEKI 384

[Close]
BLAST of MELO3C006639 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74
Identity = 155/329 (47.11%), Postives = 219/329 (66.57%), Query Frame = 1 

Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           S K A  AS     E   K  +V+    +HGFS+SQIS I +  P++LA++P+K LLPKL
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF SKG S P++AK+V + P +L  SL  +II +F++ +  L S+E  +  IK+F+ IL
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             DL   V  NI  L++ GVP SNI   L  +P  F++    F+E +E V +MGFNP ++
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++A+ A+RAM KSTW++K++ Y++WG SEEEI LAF + P CM  SEDKI   MDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIE 341
           NK+G ESS +ARRP LI LSL+KR+ PR  V QVLL KGLIK   ++ +   S+EK F+ 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

Query: 342 KFINPHKKKGEQIPGLLELYKQKLMDSRR 369
           KF+N  K   E+ P L++LY++K+  S++
Sbjct: 361 KFVNGFK---EEAPQLMKLYQEKINLSKK 386

[Close]
BLAST of MELO3C006639 vs. TrEMBL
Match: B9RG71_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-74
Identity = 157/356 (44.10%), Postives = 230/356 (64.61%), Query Frame = 1 

Query: 27  LKSLRFLSTSSEIVS------------SPKSASLASNAVQLENNRKA--VIELLANHGFS 86
           L  +RFLST +   S            SP+SA   S +V  EN  K   V+    N GFS
Sbjct: 25  LTCVRFLSTDANQHSFTISYLIKTYGFSPESAVSISKSVSFENPEKPDLVLSFFKNLGFS 84

Query: 87  QSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRII 146
           +SQIS+I R+ P+IL+ NPEK + PK+ FF+SKG S+P++ ++   +P++ T SL+ +++
Sbjct: 85  KSQISEIIRKYPRILSPNPEKAIFPKVEFFRSKGASTPDLIRIFSCYPWLFTRSLDNQLV 144

Query: 147 YNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQP 206
            +F++ +    S+EKT+AAIK++  ILAR L+ +V PNI  L++ GVP +NIL  ++Y P
Sbjct: 145 PSFNFFRDFHQSDEKTIAAIKRYPNILARRLETAVIPNINTLQENGVPAANILLLVRYHP 204

Query: 207 RVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEE 266
           +   + + +FK+IVE V  MGF+P + QF++A+  L   ++S WD+KV+VY++WG S E+
Sbjct: 205 QKIEMETDKFKKIVEEVKIMGFDPLKSQFVLAIMVLIGTSRSMWDRKVDVYKRWGWSTED 264

Query: 267 ICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQ 326
           I  AF ++PWCM +SEDK+   MDF+VNK+  ESS  A RP L+SLSLKKRL PR  V Q
Sbjct: 265 IYRAFAKYPWCMAISEDKVMAVMDFYVNKLNLESSVTAHRPLLLSLSLKKRLVPRASVIQ 324

Query: 327 VLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYKQKLMDSRR 369
            L  K LIK  + I      +EK F+EK IN +    E+ P LL+LY +KL  S++
Sbjct: 325 FLSSKSLIKMDSGITRVFEYTEKDFMEKCINCY----EEAPQLLKLYNEKLELSKQ 376

[Close]
BLAST of MELO3C006639 vs. TrEMBL
Match: B9RG71_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-62
Identity = 137/333 (41.14%), Postives = 204/333 (61.26%), Query Frame = 1 

Query: 38  EIVSSPKSASLASNAVQLENNR--KAVIELLANHGFSQSQISDIGRRRPQILAANPEKIL 97
           E+ S  +SA   S  V  E+ +     +    N GFSQ+QIS I R+ PQ L+AN EK +
Sbjct: 472 ELESKIESALSISKRVNFEDPKIPDLFLSFFKNLGFSQTQISKITRKSPQTLSANLEKSI 531

Query: 98  LPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQF 157
            PK+ FF SKG S+  + ++   +P++   SL  ++I +F++ +    S+ KT+ AIK+F
Sbjct: 532 FPKVEFFISKGASTTGLIRIFTLYPWLFRRSLENQLIPSFNFFRDFHHSDGKTITAIKRF 591

Query: 158 AGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFN 217
             IL   L+  V PNI  L++ GVP S +  ++   P++    +   K+IVE V +MGF+
Sbjct: 592 PHILMLQLEADVTPNINTLREYGVPASKVSLFVHCFPQLIGTRADMSKKIVEEVKKMGFD 651

Query: 218 PQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAM 277
           P + +F+VA+  L   ++S WD+KV+VY++WG S E+I  AF ++PWCM +SEDK+   M
Sbjct: 652 PSKSKFVVAITVLTGTSRSMWDRKVDVYKRWGWSTEDIYRAFAKNPWCMTISEDKLMAVM 711

Query: 278 DFFVNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEK 337
           D +VNK+  ESS +A RP L+SLSLKKRL PR  V Q L  KGLIK  + I      +EK
Sbjct: 712 DLYVNKLNLESSVIAHRPLLLSLSLKKRLVPRASVIQFLSSKGLIKMDSGITRVFEYTEK 771

Query: 338 RFIEKFINPHKKKGEQIPGLLELYKQKLMDSRR 369
            F+EK IN +    E+ P LL+L+ + L  S++
Sbjct: 772 DFMEKCINCY----EEAPQLLKLHNENLELSKQ 800


HSP 2 Score: 285.8 bits (730), Expect = 7.5e-74
Identity = 145/317 (45.74%), Postives = 216/317 (68.14%), Query Frame = 1 

Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           S K A  AS  ++ E   K  +V+    +HGFS+SQ S I +  P++LA++P+K LLPKL
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF SKG S P++AK+V + P +L  SL  +II +F++++  L S+E  +  +K+F+ IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             DL   V  N+  L++ GVP SNI   L Y+P  F+++   F++ +E V +MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 281
           +F++A+ A+RA  +S W++K+++Y+KWG SEEEI LAF + PWCM+ SEDKI   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIE 341
           NK+G ESS +A RP LI LSL+KR+ PR  V QVLL KGLI K  ++ +   S+EK F+E
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KFINPHKKKGEQIPGLL 357
           +F+N +K++  Q+  L+
Sbjct: 367 RFVNAYKEEAPQLIKLM 383

[Close]
BLAST of MELO3C006639 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-60
Identity = 123/321 (38.32%), Postives = 203/321 (63.24%), Query Frame = 1 

Query: 42  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKL 101
           SP SA++AS  + L++  +   V+ LL +HGF+ +QIS + ++RP +L AN E +LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGIL 161
            FF S G+S   +A+ + + P +LT SL  ++I +++++++VL S+EK +AA+++   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 ARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL 221
             D   ++ PNI  + + GVP+  I   L + P   +  +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFLVAVFALRAM-TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFF 281
            F++A+ AL     KS WDK  EVY++WG SE++I  AFK+HP CMM+SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKIGCESSFVARRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFI 341
           VN++      +A+ P ++  SL+KR+ PR  V +VL+  GL+K+  ++   +   EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKFINPHKKKGEQIPGLLELY 360
           EK +  ++   E++P L+ LY
Sbjct: 382 EKLVIKYE---EELPELMNLY 399

[Close]
BLAST of MELO3C006639 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 191.4 bits (485), Expect = 9.7e-49
Identity = 114/359 (31.75%), Postives = 203/359 (56.55%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESP--LKSLRFLSTSSEIVSSPKSASLASNAVQLENN 60
           + +L  RI  L S S V S    +    L+S            S +SA   S  V+L ++
Sbjct: 26  LGFLVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSS 85

Query: 61  RK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLV 120
           +K  +V+ L  +HGF+  QI+ + +  P++L+ +PE ++ PKL+FF S G S+ + AK++
Sbjct: 86  KKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMI 145

Query: 121 CTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQIS--VGPNIEIL 180
            + P +L+ SL+KR+I  +D ++++L  EE  +  +K+  GI    L+I+  V   + I 
Sbjct: 146 SSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIRCFSLKITHCVSLRVSIC 205

Query: 181 KQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKS 240
           +++GVPD +I   +Q  P  F     RF E++ RV   GF+P++  F+ A+ A    ++S
Sbjct: 206 RELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSES 265

Query: 241 TWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPA 300
             ++K ++++ +G S+E+   A  R P C+ VS++KI   +++ VN IG ++  +  RP 
Sbjct: 266 AMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPV 325

Query: 301 LISLSLKKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKKKGEQI 353
           ++SLS++KR+ PR  V  +LL KGL+KK+  N    +      F++KF+  ++ +  Q+
Sbjct: 326 VLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQL 382

[Close]
BLAST of MELO3C006639 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 164.9 bits (416), Expect = 9.7e-41
Identity = 98/298 (32.89%), Postives = 170/298 (57.05%), Query Frame = 1 

Query: 51  NAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSP 110
           N   LE  R +VI++L ++ FS +QI    R  P+++  N EKIL PKL FF+  G +  
Sbjct: 64  NLKSLEQPR-SVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGS 123

Query: 111 EIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAG--ILARDLQISVG 170
            + K V     V+  SL K++I   + +++++  + + L  I    G  +L+RD  + + 
Sbjct: 124 GLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLL 183

Query: 171 PNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFAL 230
           PNI  L+  G+  S +   L+ QPR+F +S  + +  V R  ++GF       + AV +L
Sbjct: 184 PNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISL 243

Query: 231 RAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSF 290
            ++++ T+D+KV+++   G SE+EI    +R P  +  SEDK+    +F++ ++G E   
Sbjct: 244 SSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREA 303

Query: 291 VARRPALISLSLKKRLNPRGYVYQVLLEKGLI----KKQANIPLFVSSSEKRFIEKFI 343
           +A+RP ++S +L+KR+ PR  V Q+L EKGL+    KK+ N+   V  +E+ F+EK++
Sbjct: 304 LAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360


HSP 2 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 36/134 (26.87%), Postives = 62/134 (46.27%), Query Frame = 1 

Query: 10  LLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQL----ENNRKAVIEL 69
           LLR    +F+   SE  L+   ++S + ++  +  S  L    + L    E      ++L
Sbjct: 201 LLRRQPRIFN--LSEEKLRG--YVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKL 260

Query: 70  LANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTG 129
              +GFS+ +I+DI RR P ++  + +K+ L    + +  GL    +AK  C    VL+ 
Sbjct: 261 FMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPC----VLSY 320

Query: 130 SLNKRIIYNFDYIQ 140
           +L KR+I     +Q
Sbjct: 321 NLEKRVIPRLKVLQ 326

[Close]
BLAST of MELO3C006639 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-27
Identity = 76/230 (33.04%), Postives = 127/230 (55.22%), Query Frame = 1 

Query: 56  ENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKL 115
           +NN  +V+ LL +HGF+ SQIS I R  PQ+L A+ EK L PKL F QS+G SS EI ++
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCTFPYVLTGSLNKRIIYNFDYIQAVL----GSEEKTLAAIKQFAGILARDLQISVGPNI 175
           V + P +L    +K I   +D+I+  L       EK   ++ Q  G L   ++     N+
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NV 200

Query: 176 EILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALR 235
            +L+++G+P   +   L    QP   +    +F+E +++V EMGF+P   +F+ A+  + 
Sbjct: 201 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 260

Query: 236 AMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFV 280
            M + T ++KV +Y+  G    ++  +FK+ P  + VSE K+  +++ F+
Sbjct: 261 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300


HSP 2 Score: 67.0 bits (162), Expect = 2.8e-11
Identity = 84/360 (23.33%), Postives = 154/360 (42.78%), Query Frame = 1 

Query: 13  SPSSVF----SHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLAN 72
           +P SV     SHGF+ S + ++  +    +++ +    SL              ++ L +
Sbjct: 83  NPDSVLNLLTSHGFTGSQISTI--IRDYPQLLIADAEKSLGPK-----------LQFLQS 142

Query: 73  HGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLS-SPEIAKLVCTFPYVLTGSL 132
            G S S+I++I    P+IL     K +     F +   L  S +  KL  + P    G+L
Sbjct: 143 RGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ---GNL 202

Query: 133 NKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNI--EILKQIGVP--DSN 192
             +I  N   ++  LG   K L ++      L  D Q   G     E LK++     D  
Sbjct: 203 ENKI-RNVSVLRE-LGMPHKLLFSL------LISDSQPVCGKEKFEETLKKVVEMGFDPT 262

Query: 193 ILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRL--QFLVAVFALRAMTKSTWDKKVE 252
             K+++    ++ ++    +E V     +GF+   +   F     +LR   K   D  +E
Sbjct: 263 TSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDS-IE 322

Query: 253 VYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLK 312
            +   G S +E     K  P C+ +S + +    +F V K+      V   PA+   SL+
Sbjct: 323 TFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLE 382

Query: 313 KRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 361
           KR+ PRG V + L+ KGL++ +  +I   +  +++ F+ +++  H  K + +  L+ +Y+
Sbjct: 383 KRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDK-QLVTELMAIYR 416

[Close]
BLAST of MELO3C006639 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.8e-26
Identity = 84/283 (29.68%), Postives = 144/283 (50.88%), Query Frame = 1 

Query: 5   FRRILLLRSPSSVFSHGFSE--SPLKSL-------RFLSTSSEIVSS-------PKSASL 64
           +R + LL   SS F+  FS   +  K L       R   T S ++ S        +S S+
Sbjct: 18  WRNLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISM 77

Query: 65  ASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLS 124
            +N  + + N  +V++LL ++GF  SQIS I    P+ L  NPEK L  KL F +  G S
Sbjct: 78  KANFDE-KGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGAS 137

Query: 125 SPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVG 184
           S E+ ++V   P +L     K I + +DY++ +L  ++ + ++ K+         Q +  
Sbjct: 138 SSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKR--------KQTNRN 197

Query: 185 PNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFAL 244
            N+ +L+++GVP   +L  L  + +  +    RF+E V+++ EMGF+P+  +F+ A++  
Sbjct: 198 RNVSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVNALYVF 257

Query: 245 RAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKI 272
             ++  T ++KV  Y + GLS  E+   FK+ P+ +  SE  I
Sbjct: 258 YELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290


HSP 2 Score: 40.8 bits (94), Expect = 2.1e-03
Identity = 33/114 (28.95%), Postives = 56/114 (49.12%), Query Frame = 1 

Query: 238 KKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESS----FVARRP 297
           +K E  ++ GL++EE+CL  K++P C+  SE+KI  ++  F+ ++G         + R P
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFL-ELGFTKDEVLMIIKRHP 351

Query: 298 ALISL---SLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINP 345
             I L   S+KK+       + V      +K  A+ P+ +  S    +EKF+ P
Sbjct: 352 QCIGLAADSVKKKTE-----FLVKTMGWPLKVVASTPIVLGFS----LEKFVLP 395

[Close]
BLAST of MELO3C006639 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 705.3 bits (1819), Expect = 5.7e-200
Identity = 365/368 (99.18%), Postives = 366/368 (99.46%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 360
           KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHK+  EQIPGLLELYK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKE--EQIPGLLELYK 360

Query: 361 QKLMDSRR 369
           QKLMDSRR
Sbjct: 361 QKLMDSRR 366

[Close]
BLAST of MELO3C006639 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 622.5 bits (1604), Expect = 4.8e-175
Identity = 322/368 (87.50%), Postives = 335/368 (91.03%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           A      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC+FP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 360
           KKRLNPRGYVYQVLLEKGLIKKQ NIPLFVSSSE RFI+KFINPHK   E+IPGLLE Y+
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHK---EKIPGLLESYE 360

Query: 361 QKLMDSRR 369
           QKLMDSRR
Sbjct: 361 QKLMDSRR 365

[Close]
BLAST of MELO3C006639 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 617.1 bits (1590), Expect = 2.0e-173
Identity = 321/368 (87.23%), Postives = 337/368 (91.58%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI LLA+HGFS+SQIS I +R PQIL+ANPEKILLPKLLFFQSKGLSSPEIAKLVC+FP
Sbjct: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
            VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 360
           KKRLNPRGYVYQVLLEKGLIKKQ NIPLFVSSSE RFI+KFINPHK   E+IPGLLE Y+
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHK---EKIPGLLESYE 360

Query: 361 QKLMDSRR 369
           QKLMDSRR
Sbjct: 361 QKLMDSRR 365

[Close]
BLAST of MELO3C006639 vs. NCBI nr
Match: gi|659076742|ref|XP_008438844.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo])

HSP 1 Score: 608.2 bits (1567), Expect = 9.4e-171
Identity = 317/368 (86.14%), Postives = 333/368 (90.49%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+ NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           AVI  LA++GFS+SQIS   +R PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           + L  SLNKRII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNILKY QYQPRVF  +SIRFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 360
           KKRLNPRGYVYQVLLEKGLIKKQ NIPLFVSSSE RFI+KFINPHK   E+IPGLLE Y+
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHK---EKIPGLLESYE 360

Query: 361 QKLMDSRR 369
           QKLMDSRR
Sbjct: 361 QKLMDSRR 365

[Close]
BLAST of MELO3C006639 vs. NCBI nr
Match: gi|659076748|ref|XP_008438847.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.4e-169
Identity = 310/368 (84.24%), Postives = 331/368 (89.95%), Query Frame = 1 

Query: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60
           MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120
           A      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLLFFQSKGLSSPEI KLVC +P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYP 120

Query: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180
           + L  SLNKR+I  FDYIQAV GS+EK LAAIKQFAGIL  DL+I VGPNIEILKQIGVP
Sbjct: 121 WALRASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240
           DSNI KYLQY+PRVF+ + IRFKEIVER  EMGFNPQ+LQFLVAVF LR+M KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300
           EVYRKWGLSEEEI LAF++HPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKKKGEQIPGLLELYK 360
           KKRLNPRGYVYQVLLEKGLIKKQ NIPLFVSSSE RFI+KFINPHK   E+IPGLLE Y+
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHK---EKIPGLLESYE 360

Query: 361 QKLMDSRR 369
           QKLMDSRR
Sbjct: 361 QKLMDSRR 365

The following BLAST results are available for this feature:
BLAST of MELO3C006639 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF5_ARATH6.6e-0722.63Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of MELO3C006639 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B1K5_VITVI6.7e-7546.60Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1[more]
A5C3Y0_VITVI1.5e-7445.37Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1[more]
F6HDG3_VITVI2.0e-7447.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=... [more]
B9RG71_RICCO3.3e-7444.10Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1[more]
B9RG71_RICCO2.9e-6241.14Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1451930 PE=4 SV=1[more]
BLAST of MELO3C006639 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.12.5e-6038.32 Mitochondrial transcription termination factor family protein[more]
AT1G21150.19.7e-4931.75 Mitochondrial transcription termination factor family protein[more]
AT5G64950.19.7e-4132.89 Mitochondrial transcription termination factor family protein[more]
AT1G61970.18.0e-2733.04 Mitochondrial transcription termination factor family protein[more]
AT5G23930.11.8e-2629.68 Mitochondrial transcription termination factor family protein[more]
BLAST of MELO3C006639 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077781|ref|XP_008439382.1|5.7e-20099.18PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo][more]
gi|659076738|ref|XP_008438842.1|4.8e-17587.50PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo][more]
gi|659076750|ref|XP_008438848.1|2.0e-17387.23PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo][more]
gi|659076742|ref|XP_008438844.1|9.4e-17186.14PREDICTED: uncharacterized protein LOC103483819 isoform X7 [Cucumis melo][more]
gi|659076748|ref|XP_008438847.1|1.4e-16984.24PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU64954melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006639T1MELO3C006639T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64954MU64954transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 233..337
score: 1.7E-14coord: 63..222
score: 2.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 113..145
score: 1.6coord: 286..320
score: 0.95coord: 149..180
score: 180.0coord: 254..285
score: 1.3coord: 77..108
score: 0.04coord: 185..215
score: 5
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 42..363
score: 9.3E
NoneNo IPR availablePANTHERPTHR13068:SF28MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATEDcoord: 42..363
score: 9.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006639Cp4.1LG12g05540Cucurbita pepo (Zucchini)cpemeB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006639Cucumber (Chinese Long) v3cucmeB236
MELO3C006639Cucumber (Chinese Long) v3cucmeB510
MELO3C006639Watermelon (97103) v2mewmbB434
MELO3C006639Watermelon (97103) v2mewmbB448
MELO3C006639Wax gourdmewgoB521
MELO3C006639Wax gourdmewgoB529
MELO3C006639Melon (DHL92) v3.5.1memeB051
MELO3C006639Cucumber (Gy14) v1cgymeB307
MELO3C006639Cucumber (Gy14) v1cgymeB439
MELO3C006639Cucurbita maxima (Rimu)cmameB242
MELO3C006639Cucurbita maxima (Rimu)cmameB342
MELO3C006639Cucurbita maxima (Rimu)cmameB763
MELO3C006639Cucurbita maxima (Rimu)cmameB850
MELO3C006639Cucurbita moschata (Rifu)cmomeB230
MELO3C006639Cucurbita moschata (Rifu)cmomeB335
MELO3C006639Cucurbita moschata (Rifu)cmomeB832
MELO3C006639Cucurbita moschata (Rifu)cmomeB755
MELO3C006639Wild cucumber (PI 183967)cpimeB230
MELO3C006639Wild cucumber (PI 183967)cpimeB501
MELO3C006639Cucumber (Chinese Long) v2cumeB236
MELO3C006639Cucumber (Chinese Long) v2cumeB499
MELO3C006639Watermelon (Charleston Gray)mewcgB427
MELO3C006639Watermelon (Charleston Gray)mewcgB442
MELO3C006639Watermelon (97103) v1mewmB486
MELO3C006639Watermelon (97103) v1mewmB461
MELO3C006639Cucurbita pepo (Zucchini)cpemeB140
MELO3C006639Cucurbita pepo (Zucchini)cpemeB314
MELO3C006639Cucurbita pepo (Zucchini)cpemeB585
MELO3C006639Cucurbita pepo (Zucchini)cpemeB813
MELO3C006639Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006639Bottle gourd (USVL1VR-Ls)lsimeB369
MELO3C006639Cucumber (Gy14) v2cgybmeB200
MELO3C006639Silver-seed gourdcarmeB0610
MELO3C006639Silver-seed gourdcarmeB0828