MELO3C006633 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006633
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4713579 .. 4714836 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTCTTCAAAAACCCTAAATACCTTCCCTGCTTACTATTCTCTCATTTCTACGTCTCCCACTTTTACCGGCGGCCGCATGACCTCTCCGACTCGCCCCGCCCATTTTCCTTCATAGCTTTATCCTCTTCTTCTCAACAAGGAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTTCCTACTGTCATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCACAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATAA

mRNA sequence

ATTTCTCTTCAAAAACCCTAAATACCTTCCCTGCTTACTATTCTCTCATTTCTACGTCTCCCACTTTTACCGGCGGCCGCATGACCTCTCCGACTCGCCCCGCCCATTTTCCTTCATAGCTTTATCCTCTTCTTCTCAACAAGGAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTTCCTACTGTCATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCACAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATAA

Coding sequence (CDS)

ATGTATAACTTGTTTCGTAGAATCATTCTACTTAGATCTCCATCGTCAGTCTGTACTCACGGATTTTCCGAAAGTCCGTTGAAGTCTCTCAGATTCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATGTTGTTCAGCTCAAGAACAATCGGAAGACTGTAATTGCGTTTTTTGAGAATCATGGATTCTCTGAATCACAAATTTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCGAACACCGAGACCCTATTTCCTGTATTGTTGTTTTTTAAATCTAAAGGTCTTTCTTCCCCAGAGATAACCAAATTCGTATGTTCTGCTCCTCAAGTTTTAAAACGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACATTCAAGCCGTGCTTGGAACAGTCGAGAAGACTGTCGCTACCATAAAACGCTTTGCGGGTATTCTCGGTTGGAATCTTCGAATTTCAGTTGGTCCCAATATTGAAATTCTGAGACAATTTGGAGTGCCGGATTCAAATATTTCATTTTATCTTCAGCGGCAGCCTAAAATGTTCTCGATAAGTTCCATCCAATTCAAGGAGGTTGTAGAGAGAGTTATGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTGCTCTTCGATCAATGACCAAATCTTCATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGTTCAGTTTAGCTTTTAGAAGGCATCCATTGTGTATGACGTTTTCTGAGGATAAGATTAATGGTGTAATGGATTTTTTTGTCAACGAAATTGGATGGGAATCATCTTTCGTTGCTAGAAGACCAGTTTTAATTTCACTTAGTTTGAAGAAGAGGCTATTTCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACACAAGAAACTTTATTTGTTGTTTGAGTATCCCGAAATCCGTTTCATAGAAAAATTCATCAACCCTCACAAAAGGAGAACAGATTCCTGGATTGTTGGAGTTGTATAA

Protein sequence

MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRRTDSWIVGVV*

Homology

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BLAST of MELO3C006633 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.7e-73
Identity = 151/307 (49.19%), Postives = 206/307 (67.10%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVL 101
           S K A  AS     +   K  +V+AFF +HGFS+SQIS +VK +P +L+++ + TL P L
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF SKG S P++ K V S P +L RSL  +IIP F++ +  L + E  +  IKRF+ IL
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
            ++L   V  NI  L++FGVP SNI+  L  +P  F +    F+E +E V +MGFNP Q+
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 222 QFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFV 281
           +FV+A+ A+R+M KS+W++K++ Y++WG SEEE  LAF + P CMT SEDKI   MDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 282 NEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIE 341
           N++G ESS +ARRP+LI LSL+KR+ PR  V QVLLSKGLIK    L +LFE  E  F+ 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

Query: 342 KFINPHK 346
           KF+N  K
Sbjct: 361 KFVNGFK 367

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BLAST of MELO3C006633 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-72
Identity = 154/343 (44.90%), Postives = 225/343 (65.60%), Query Frame = 1


Query: 13  SPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK--TVIAFFENHG 72
           S +S+ T   SES   ++ +L  S  +  S K A  AS +++ +   K  +V+AFF +HG
Sbjct: 42  SSTSISTSERSES--FTVSYLIDSCGL--SHKDALSASKLLRFETPEKPDSVLAFFNSHG 101

Query: 73  FSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKFVCSAPQVLKRSLNQE 132
           FS+SQ S +VK +P +L+++ + TL P L FF SKG S P++ K V S P +LKRSL  +
Sbjct: 102 FSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKGASKPDVAKIVVSTPGILKRSLENQ 161

Query: 133 IIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPDSNISFYLQR 192
           IIP F++++  L + E  +  +KRF+ IL ++L   V  N+  L++FGVP SNI+  L  
Sbjct: 162 IIPSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMY 221

Query: 193 QPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVEVYRKWGLSE 252
           +P  F ++   F++ +E V +MGFNP Q++FV+A+ A+R+  +S W++K+++Y+KWG SE
Sbjct: 222 RPMAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQAMRAGGESCWERKIDIYKKWGWSE 281

Query: 253 EEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLFPRGYV 312
           EE  LAF + P CM +SEDKI   MDFFVN++G ESS +A RP LI LSL+KR+ PR  V
Sbjct: 282 EEIRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRESSLIAHRPFLIGLSLEKRIIPRYSV 341

Query: 313 YQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRRTDSWI 353
            QVLLSKGLI K   L +LFE  E  F+E+F+N +K      I
Sbjct: 342 VQVLLSKGLINKDISLVVLFESTEKTFLERFVNAYKEEAPQLI 380

[Close]

BLAST of MELO3C006633 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.2e-70
Identity = 156/341 (45.75%), Postives = 219/341 (64.22%), Query Frame = 1


Query: 9   ILLRSPSSVCTHGFSESPLK-SLRFLSTSSEIVSSPKSASLASNVVQLKNNRK--TVIAF 68
           + L S SS  +   SE P   ++ +L  S  +  S K A  AS  V  +   K  +V+A 
Sbjct: 416 LYLFSSSSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFETPDKPNSVLAL 475

Query: 69  FENHGFSESQISDLVKKVP-LILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQVLKR 128
           F +HGFS++Q S +VKK P L+LS   +TL P L FF SKG S P+I K V  +P +LKR
Sbjct: 476 FNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKR 535

Query: 129 SLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPDSNIS 188
           SL  +IIP F++ +  L + +  +  +KRF+ IL ++L   V  N+  L++FGVP SNI+
Sbjct: 536 SLENQIIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIA 595

Query: 189 FYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVEVYRK 248
             L  QP  F +    F+E +E V +MG NP Q++FV+A+ A+R+  KSSW++K+++Y++
Sbjct: 596 GLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKR 655

Query: 249 WGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLKKRLF 308
           WG SEEE  LAF + P CM +SEDKI   MDFFVN++G ESS +ARRP LIS SL+KR+ 
Sbjct: 656 WGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRII 715

Query: 309 PRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHK 346
           PR  V QVLLSKGLI K   L  +F+  EI F+ KF++ +K
Sbjct: 716 PRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYK 754

HSP 2 Score: 275.0 bits (702), Expect = 1.3e-70
Identity = 144/307 (46.91%), Postives = 206/307 (67.10%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVP-LILSANTETLFPVL 101
           S K A  AS  +  +   K  +V+AFF +HGFS++Q S +VK  P L+LS   +TL P L
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF SKG S P++ K V S+P +++RSL  ++IP +++ +  L + +  +  +KRF+ IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
            +++   V  N+  L++FGVP SNI+  L+ QP  F +    F+E +E V +MGFNP Q+
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFV 281
           +FV+AV A+R+  KSSW++K+++Y+ WG SEEE  LAF + P CM +SEDKI   MDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIE 341
           N++G ESS +ARRPVLIS SL+KR+ PR  V QVLLSKGLI K   L  +F+  E  F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KFINPHK 346
           KF+N +K
Sbjct: 364 KFVNVYK 370

[Close]

BLAST of MELO3C006633 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.8e-70
Identity = 146/307 (47.56%), Postives = 203/307 (66.12%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVP-LILSANTETLFPVL 101
           S K+A  AS  +  K   K  +V AFF +HGFSESQ S +V+  P L++S   ++L   L
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF SKG S+P++ K + S P +LKRSL  +IIP F++ +    + E T+AT+KRF+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
             N  I V  NI  L++ GVP SNI+  L  QP+ F +    F+E++E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFV 281
           +F  AV A+  M+KS+W++K++ Y++WG SEE+  LAF + P CM +SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIE 341
           N++G ESS +A RP LI LSL+KR+ PR  V QVLLSKGLI K   L +LFE  E  F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPHK 346
           KF+N +K
Sbjct: 360 KFVNGYK 366

[Close]

BLAST of MELO3C006633 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 8.3e-70
Identity = 146/307 (47.56%), Postives = 203/307 (66.12%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVP-LILSANTETLFPVL 101
           S K A  AS  V  ++  K  +V+A F +HGFS++Q S + KK P L+LS   +TL P L
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF SKG S P+I K V  +P +LKRSL  +IIP F++ +  L + +  +  +KRF+ IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
            ++L   V  N+  L++FGVP SNI+  L  QP  F +    F+E +E V  MGFNP Q+
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 222 QFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFV 281
           +FV+A+ A+R+  K SW++K+++Y++WG SEEE  LAF + P CM +SEDKI   MDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 282 NEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIE 341
           N++G ESS +ARRP LIS SL+KR+ PR  V QVLLSKGLI K   L  +F+  EI F+ 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 342 KFINPHK 346
           KF++ +K
Sbjct: 367 KFVDVYK 373

[Close]

BLAST of MELO3C006633 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-54
Identity = 119/304 (39.14%), Postives = 183/304 (60.20%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVPLILSANTET-LFPVL 101
           SP SA++AS  + L +  +  TV+    +HGF+ +QIS LVKK P++L AN E+ L P L
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
            FF S G+S   + + + S P +L RSL  ++IP ++++++VL + EK VA ++R   + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 GWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQL 221
             +   ++ PNI  + + GVP+  I   L   P+     + +F+ + ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFVVAVFALRSM-TKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFF 281
            FV+A+ AL     KS WDK  EVY++WG SE++   AF++HP CM  SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFI 341
           VNE+      +A+ PV++  SL+KR+ PR  V +VL+S GL+K+   L  L    E  F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

[Close]

BLAST of MELO3C006633 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-49
Identity = 108/306 (35.29%), Postives = 188/306 (61.44%), Query Frame = 1


Query: 42  SPKSASLASNVVQLKNNRK--TVIAFFENHGFSESQISDLVKKVPLILSANTETLF-PVL 101
           S +SA   S  V+L +++K  +V+A F++HGF+  QI+ ++K  P +LS + E +  P L
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGIL 161
           +FF S G S+ +  K + S+P++L  SL++ +IP +D ++++L   E  V  +KR  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 GWNLRIS--VGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQ 221
            ++L+I+  V   + I R+ GVPD +I + +Q  P  F     +F EV+ RV   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 QLQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDF 281
           +  FV A+ A    ++S+ ++K ++++ +G S+E+F  A  R P C+T S++KI   +++
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLIKKHK-KLYLLFEYPEIR 341
            VN IG ++  +  RPV++SLS++KR+ PR  V  +LLSKGL+KK     + + +     
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

[Close]

BLAST of MELO3C006633 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.1e-36
Identity = 91/308 (29.55%), Postives = 169/308 (54.87%), Query Frame = 1


Query: 43  PKSASLASNVVQLKN--NRKTVIAFFENHGFSESQISDLVKKVPLILSANTETLF-PVLL 102
           P + ++A     LK+    ++VI   +++ FS++QI   ++  P ++  N E +  P L 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFKSKGLSSPEITKFVCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAG--I 162
           FFK  G +   + KFV     V+  SL +++IP  + +++++    + +  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LGWNLRISVGPNIEILRQFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQ 222
           L  +  + + PNI  L   G+  S ++  L+RQP++F++S  + +  V R +++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFVVAVFALRSMTKSSWDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFF 282
              V AV +L S+++ ++D+KV+++   G SE+E +   RR P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNEIGWESSFVARRPVLISLSLKKRLFPRGYVYQVLLSKGLI----KKHKKLYLLFEYPE 342
           +  +G E   +A+RP ++S +L+KR+ PR  V Q+L  KGL+    KK K +  + E  E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

[Close]

BLAST of MELO3C006633 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 84/301 (27.91%), Postives = 148/301 (49.17%), Query Frame = 1


Query: 56  KNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKF 115
           KNN  +V+    +HGF+ SQIS +++  P +L A+ E +L P L F +S+G SS EIT+ 
Sbjct: 81  KNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEI 140

Query: 116 VCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILR 175
           V S P++L +  ++ I   +D+I+  L  +EK+    K    +   NL   +  N+ +LR
Sbjct: 141 VSSVPEILGKKGHKTISVYYDFIKDTL--LEKSSKNEKLCHSLPQGNLENKIR-NVSVLR 200

Query: 176 QFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSS 235
           + G+P   + F L            +F+E +++V+EMGF+P   +FV A+  +  M + +
Sbjct: 201 ELGMPHK-LLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKT 260

Query: 236 WDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNE-------------- 295
            ++KV +Y+  G    +   +F++ P+ +  SE K+   ++ F+                
Sbjct: 261 IEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHF 320

Query: 296 ---IGWESSFVARRPVLI------------------SLSLKKRLFPRGYVYQVLLSKGLI 321
              IG  +  V ++   +                    SL+KR+ PRG V + L+SKGL+
Sbjct: 321 PPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLM 377

[Close]

BLAST of MELO3C006633 vs. TAIR10
Match: AT1G61980.1 (AT1G61980.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 105.1 bits (261), Expect = 8.8e-23
Identity = 75/248 (30.24%), Postives = 132/248 (53.23%), Query Frame = 1


Query: 56  KNNRKTVIAFFENHGFSESQISDLVKKVPLILSANTE-TLFPVLLFFKSKGLSSPEITKF 115
           K+N  +V+    +HGF++SQIS +V   P +L A+ E +L P L F +S+G SS E+T+ 
Sbjct: 81  KDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEI 140

Query: 116 VCSAPQVLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILR 175
           V + P++L +  ++ I   +D+I+  L  ++K+  + K        NL   +  N+ +LR
Sbjct: 141 VSTVPKILGKRGHKTISVFYDFIKETL--LDKSSKSEKSCQPFPQGNLENKIR-NLSVLR 200

Query: 176 QFGVPDSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSS 235
           + G+P   + F L     +      +F+E +++V+EMGF+P   +FV A+  ++ ++  +
Sbjct: 201 ELGMPHK-LLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKN 260

Query: 236 WDKKVEVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWE----SSFVAR 295
            + KV  Y++ G   E     F+R P  +T SE KI   ++ F+  +G+     S  + R
Sbjct: 261 IEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLG-LGFSRDEFSVLIKR 320

Query: 296 RPVLISLS 299
            P  I LS
Sbjct: 321 FPQGIGLS 323

HSP 2 Score: 62.0 bits (149), Expect = 8.6e-10
Identity = 42/171 (24.56%), Postives = 80/171 (46.78%), Query Frame = 1


Query: 180 DSNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKV 239
           D + S +++    +  +S    ++ V     +GF+   +++V  VF       +  +KK+
Sbjct: 236 DPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFD---VEYVWTVFKRWPNFLTHSEKKI 295

Query: 240 ----EVYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLI 299
               E +   G S +EFS+  +R P  +  S + +    +F V ++ W    +   P ++
Sbjct: 296 LNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVL 355

Query: 300 SLSLKKRLFPRGYVYQVLLSKGLI-KKHKKLYLLFEYPEIRFIEKFINPHK 346
             SL+KR  PRG V Q L+SKGLI  +   +  +F   +  F+ +++  H+
Sbjct: 356 GYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHE 403

[Close]

BLAST of MELO3C006633 vs. NCBI nr
Match: gi|659076718|ref|XP_008438831.1| (PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo])

HSP 1 Score: 677.2 bits (1746), Expect = 1.6e-191
Identity = 345/347 (99.42%), Postives = 346/347 (99.71%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
           TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRR 348
           KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHK +
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQ 347

[Close]

BLAST of MELO3C006633 vs. NCBI nr
Match: gi|778688492|ref|XP_011652761.1| (PREDICTED: uncharacterized protein LOC105435087 [Cucumis sativus])

HSP 1 Score: 582.8 bits (1501), Expect = 4.1e-163
Identity = 294/347 (84.73%), Postives = 319/347 (91.93%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIILLRSPSSV +HGFSE PLKSLR+LSTSSEIVSSPKSASL SNVVQL NNRK
Sbjct: 1   MYNLFRRIILLRSPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSASLPSNVVQLMNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISD VKKVPL+LS N ETLFP+LLFF+SKGLSS  ITK VCS PQ
Sbjct: 61  AIIAFFENHGFSESQISDFVKKVPLMLSENPETLFPILLFFQSKGLSSSAITKLVCSVPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEII VFDYIQAVLGTVEKTV TIKRF  ILGWNLRISVGPNIEIL+Q GVPD
Sbjct: 121 VLKRSLNQEIITVFDYIQAVLGTVEKTVTTIKRFPRILGWNLRISVGPNIEILKQLGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPKMF  SSIQFKE++ERVMEMGF+PQ+LQF+VAVFALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKMFFTSSIQFKEIIERVMEMGFSPQRLQFLVAVFALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEE+F +AFRR+P+C+TFSEDK N VMDFFVN+IG +SSFVAR+PVLISLSLK
Sbjct: 241 VYRKWGLSEEDFRIAFRRNPMCITFSEDKTNSVMDFFVNKIGCQSSFVARKPVLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRR 348
           KR+FPRGYVYQVLLSKGLIKKHKK+ LLFE PE RFIEKFINPHK +
Sbjct: 301 KRIFPRGYVYQVLLSKGLIKKHKKIILLFESPEKRFIEKFINPHKEQ 347

[Close]

BLAST of MELO3C006633 vs. NCBI nr
Match: gi|778678818|ref|XP_011651040.1| (PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 6.5e-161
Identity = 294/347 (84.73%), Postives = 314/347 (90.49%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEF LAFR++P CM  SEDKIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRR 348
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HK +
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQ 347

[Close]

BLAST of MELO3C006633 vs. NCBI nr
Match: gi|778678813|ref|XP_011651039.1| (PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 6.5e-161
Identity = 294/347 (84.73%), Postives = 314/347 (90.49%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRIIL  SPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            +IAFFENHGFSESQISDL+KKVPLILSAN E LFP+LLFFKSKGLSSP ITK VC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           +LKRSLNQEIIP FDYIQAVLGTVEKTVATIKRF  ILGWNLRISVGPNIEIL+QFGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS YLQRQPK+FS SSI+FKE+VERV EMGFNPQ+LQF+VAV ALRS+TKSSWDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEEF LAFR++P CM  SEDKIN  MDFF+N++G ESS VARRP L+S SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRR 348
           KRLFPRGYVYQVLLSKGLIKK K L LLFE PE RFIEK+IN HK +
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQ 347

[Close]

BLAST of MELO3C006633 vs. NCBI nr
Match: gi|778678826|ref|XP_011651042.1| (PREDICTED: uncharacterized protein LOC105434840 [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 6.1e-159
Identity = 289/347 (83.29%), Postives = 317/347 (91.35%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60
           MYNLFRRI++LRSPSSV THGFSESPLKSLRFLSTSSEIVSSPKSASL SNVVQLKNNRK
Sbjct: 1   MYNLFRRILILRSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLPSNVVQLKNNRK 60

Query: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120
            VIAFFENHGFSE QISD+VKK+PLILSAN ETLFP+ LFFKSKGLSS  ITK VCSAPQ
Sbjct: 61  AVIAFFENHGFSELQISDIVKKIPLILSANPETLFPIFLFFKSKGLSSSAITKLVCSAPQ 120

Query: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180
           VLKRSLNQEIIPVFDYIQAVLGTVEKTV TIKRF  ILGW+LRISV PNIE+L+QFGVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVTTIKRFPRILGWDLRISVDPNIELLKQFGVPD 180

Query: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240
           SNIS +LQR PK+FS S I+FKE+VERV EMGFNPQ+L FVVAV A++S+TKS+W+KKVE
Sbjct: 181 SNISTFLQRHPKLFSTSPIRFKEIVERVTEMGFNPQRLLFVVAVSAMQSITKSTWNKKVE 240

Query: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300
           VYRKWGLSEEE SLAFR++PLC+TFSEDKING MDFFVN+IG E SFVARR +LISLSLK
Sbjct: 241 VYRKWGLSEEELSLAFRKNPLCITFSEDKINGGMDFFVNKIGCEPSFVARRTLLISLSLK 300

Query: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKRR 348
           KRLFPRG+VYQVLLSKGLI+KH+ L+LLFE PE RFIEK INPHK +
Sbjct: 301 KRLFPRGFVYQVLLSKGLIRKHEYLFLLFESPEKRFIEKIINPHKEQ 347

The following BLAST results are available for this feature:

BLAST of MELO3C006633 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	2.7e-73	49.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
F6HDG2_VITVI	2.3e-72	44.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	2.2e-70	45.75	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5B1K5_VITVI	2.8e-70	47.56	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3X9_VITVI	8.3e-70	47.56	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]

BLAST of MELO3C006633 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	2.5e-54	39.14	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.9e-49	35.29	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.1e-36	29.55	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.1e-25	27.91	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	8.8e-23	30.24	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006633 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076718\|ref\|XP_008438831.1\|	1.6e-191	99.42	PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo]	[more]
gi\|778688492\|ref\|XP_011652761.1\|	4.1e-163	84.73	PREDICTED: uncharacterized protein LOC105435087 [Cucumis sativus]	[more]
gi\|778678818\|ref\|XP_011651040.1\|	6.5e-161	84.73	PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus]	[more]
gi\|778678813\|ref\|XP_011651039.1\|	6.5e-161	84.73	PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus]	[more]
gi\|778678826\|ref\|XP_011651042.1\|	6.1e-159	83.29	PREDICTED: uncharacterized protein LOC105434840 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58298	melon EST collection version 4.0	transcribed_cluster
MU60008	melon EST collection version 4.0	transcribed_cluster
MU62433	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006633T1	MELO3C006633T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62433	MU62433	transcribed_cluster
MU58298	MU58298	transcribed_cluster
MU60008	MU60008	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..222 score: 5.2E-18coord: 187..319 score: 2.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..107 score: 0.21coord: 148..179 score: 960.0coord: 285..319 score: 110.0coord: 112..144 score: 12.0coord: 253..284 score: 0.024coord: 184..214 score: 2
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..349 score: 6.2E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..349 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006633	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006633	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006633	Watermelon (97103) v2	mewmbB434
MELO3C006633	Watermelon (97103) v2	mewmbB448
MELO3C006633	Wax gourd	mewgoB521
MELO3C006633	Wax gourd	mewgoB529
MELO3C006633	Melon (DHL92) v3.5.1	memeB051
MELO3C006633	Cucumber (Gy14) v1	cgymeB307
MELO3C006633	Cucumber (Gy14) v1	cgymeB439
MELO3C006633	Cucurbita maxima (Rimu)	cmameB242
MELO3C006633	Cucurbita maxima (Rimu)	cmameB342
MELO3C006633	Cucurbita maxima (Rimu)	cmameB763
MELO3C006633	Cucurbita maxima (Rimu)	cmameB850
MELO3C006633	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006633	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006633	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006633	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006633	Wild cucumber (PI 183967)	cpimeB230
MELO3C006633	Wild cucumber (PI 183967)	cpimeB501
MELO3C006633	Cucumber (Chinese Long) v2	cumeB236
MELO3C006633	Cucumber (Chinese Long) v2	cumeB499
MELO3C006633	Watermelon (Charleston Gray)	mewcgB427
MELO3C006633	Watermelon (Charleston Gray)	mewcgB442
MELO3C006633	Watermelon (97103) v1	mewmB486
MELO3C006633	Watermelon (97103) v1	mewmB461
MELO3C006633	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006633	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006633	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006633	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006633	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006633	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006633	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006633	Cucumber (Gy14) v2	cgybmeB200
MELO3C006633	Silver-seed gourd	carmeB0610
MELO3C006633	Silver-seed gourd	carmeB0828