MELO3C006632 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006632
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4710515 .. 4711864 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGGGTGCCGCATGGCCTCTCCGGCTCTCGCCGCCCATTTTCCTTCATAGCTTCATCCTCTTTTGGGGCATTTGTAGTTTCTCTCATTCTTCTTCTCAACAAGTAACCAACAGGTCAGTCTTTCCTTCTCCTCGCAGTTCTTACCGTCATGTATAACTTGTTTCGCAGAACCATTCTACTTAGACCTTCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCTGATATTGTATCATCTCCTACATCTGCTCCGTTGGCTTCTAATGCTCTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTTTCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGTCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCATTTCCTCGTGTCTTAACAGGAAGTTTAGACAAACGAATTATCCCAGCCTTCGATTACATTCAAGCGGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTCTATAAAACAGTTTGCGGGTATTCTCGTGAAGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCTTTTAGCTTTTAGAAGGCATCCGTGGAGTATGATGCGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAAGCATCTTTCGCTGCTAGAAGACCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACCAGAATCTTATTTTGTTCTTTGAGTCTTCTGAAAACTGTTTCATAGAAAAATTCATTAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGAACAGGTTCCATCTCCTTGAAATTTAACTGATTTGTTAGTTGATATGTCTAGTGACAACTAAAATTTATATATATTGAAGAGTTTGTGTTTCTAGCAATACTGC

mRNA sequence

ACCGGGTGCCGCATGGCCTCTCCGGCTCTCGCCGCCCATTTTCCTTCATAGCTTCATCCTCTTTTGGGGCATTTGTAGTTTCTCTCATTCTTCTTCTCAACAAGTAACCAACAGGTCAGTCTTTCCTTCTCCTCGCAGTTCTTACCGTCATGTATAACTTGTTTCGCAGAACCATTCTACTTAGACCTTCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCTGATATTGTATCATCTCCTACATCTGCTCCGTTGGCTTCTAATGCTCTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTTTCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGTCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCATTTCCTCGTGTCTTAACAGGAAGTTTAGACAAACGAATTATCCCAGCCTTCGATTACATTCAAGCGGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTCTATAAAACAGTTTGCGGGTATTCTCGTGAAGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCTTTTAGCTTTTAGAAGGCATCCGTGGAGTATGATGCGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAAGCATCTTTCGCTGCTAGAAGACCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACCAGAATCTTATTTTGTTCTTTGAGTCTTCTGAAAACTGTTTCATAGAAAAATTCATTAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGAACAGGTTCCATCTCCTTGAAATTTAACTGATTTGTTAGTTGATATGTCTAGTGACAACTAAAATTTATATATATTGAAGAGTTTGTGTTTCTAGCAATACTGC

Coding sequence (CDS)

ATGTATAACTTGTTTCGCAGAACCATTCTACTTAGACCTTCATCGTCAGTCTTTTCTCACGGATTTTCCGAATGTCCGTTGAAATCTCTCAGATACTTATCGACTTCTTCTGATATTGTATCATCTCCTACATCTGCTCCGTTGGCTTCTAATGCTCTTCAGCTCAAGAATAAACGGAAGGCTGTAATTGCGTTACTTGCGGATCATGGATTCTCTGAATCACAAATCTCTGACCTTGACAAGAGGTTTCCTCAAATTCTTTCTGCGAACCCCGAGAAAAGTCTATTGCCCAAACTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCATTTCCTCGTGTCTTAACAGGAAGTTTAGACAAACGAATTATCCCAGCCTTCGATTACATTCAAGCGGTGCTTGGAAGTGAGGAGAAGACTCTCGCTTCTATAAAACAGTTTGCGGGTATTCTCGTGAAGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTCAAATATCTTCAGTACCAGCCTAGAGTGTTCTTGATAAATCCCGTCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACAATTGCAGTTTGTTGTTGCTGTTTTTATTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCTTTTAGCTTTTAGAAGGCATCCGTGGAGTATGATGCGTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGCGAAGCATCTTTCGCTGCTAGAAGACCAATTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACCAGAATCTTATTTTGTTCTTTGAGTCTTCTGAAAACTGTTTCATAGAAAAATTCATTAACCCTCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR*

Homology

[Close]

BLAST of MELO3C006632 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.3e-81
Identity = 162/355 (45.63%), Postives = 236/355 (66.48%), Query Frame = 1


Query: 11  LRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVIALLADHG 70
           L P SS+   G S+    ++ YL  S  +      +     + +  +K  +V+A    HG
Sbjct: 34  LYPFSSISPSGKSQS--FTVSYLIDSCGLSHKDALSASKFFSFETPDKPNSVLAFFNSHG 93

Query: 71  FSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKR 130
           FS+SQIS + K  P++L+++P+K+LLPKL FF SKG S P++ K+V S P +L  SL+ +
Sbjct: 94  FSKSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQ 153

Query: 131 IIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQY 190
           IIP+F++ +  L S+E  +  IK+F+ IL+ DL      NI  L++ GVP SNI   L  
Sbjct: 154 IIPSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMN 213

Query: 191 QPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSE 250
           +P  F++ P  F+E +E V +MGFNP Q++FV+A+  +RAM KSTW++K++ Y++WG SE
Sbjct: 214 RPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSE 273

Query: 251 EEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYV 310
           EEI LAF + P  M  SEDKI   MDFFVNKMG E+S  ARRP+L+ LSL+KRI+PR  V
Sbjct: 274 EEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSV 333

Query: 311 YQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKLMDSRR 366
            QVLLSKGLIK   +L++ FES+E  F+ KF+N  KE+ P L++LY++K+  S++
Sbjct: 334 IQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKINLSKK 386

[Close]

BLAST of MELO3C006632 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 6.9e-80
Identity = 156/321 (48.60%), Postives = 220/321 (68.54%), Query Frame = 1


Query: 42  SPTSAPLASNALQLKNKRK--AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKL 101
           S  +A  AS  L  K   K  +V A    HGFSESQ S + +  PQ+L ++P+KSLL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGIL 161
            FF SKG S+P++VK++ S P +L  SL+ +IIP+F++ +    SEE T+A++K+F+ +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 VKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQL 221
           + +  I    NI  L++ GVP SNI   L  QPR F++ P  F+E +E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFV 281
           +F  AV  +  M+KSTW++K++ Y++WG SEE+I LAF + PW M+ SEDKI   MDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIE 341
           NKMG E+S  A RP L+ LSL+KRI+PR  V QVLLSKGLI K  +L++ FES+E  F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPHKEQIPGLLELYKQKL 361
           KF+N +KE+ P LL LY++K+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006632 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.6e-79
Identity = 149/309 (48.22%), Postives = 218/309 (70.55%), Query Frame = 1


Query: 49  ASNALQLKNKRK--AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKG 108
           AS  L+ +   K  +V+A    HGFS+SQ S + K  P++L+++P+K+LLPKL FF SKG
Sbjct: 74  ASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKG 133

Query: 109 LSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRIS 168
            S P++ K+V S P +L  SL+ +IIP+F++++  L S+E  +  +K+F+ IL+ DL   
Sbjct: 134 ASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTY 193

Query: 169 AGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVF 228
              N+  L++ GVP SNI   L Y+P  F++NP  F++ +E V +MGFNP Q++FV+A+ 
Sbjct: 194 VASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQ 253

Query: 229 ILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEA 288
            +RA  +S W++K+++Y+KWG SEEEI LAF + PW M+ SEDKI   MDFFVNKMG E+
Sbjct: 254 AMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRES 313

Query: 289 SFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHK 348
           S  A RP L+ LSL+KRI+PR  V QVLLSKGLI K  +L++ FES+E  F+E+F+N +K
Sbjct: 314 SLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLERFVNAYK 373

Query: 349 EQIPGLLEL 356
           E+ P L++L
Sbjct: 374 EEAPQLIKL 382

[Close]

BLAST of MELO3C006632 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.7e-75
Identity = 156/353 (44.19%), Postives = 228/353 (64.59%), Query Frame = 1


Query: 9   ILLRPSSSVFSHGFSECPLK-SLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVIALLA 68
           + L  SSS  S   SE P   ++ YL  S  +      +       +  +K  +V+AL  
Sbjct: 416 LYLFSSSSSTSISTSEKPHPFTVSYLINSCGLSHKDARSASKYVHFETPDKPNSVLALFN 475

Query: 69  DHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSL 128
            HGFS++Q S + K+ PQ+L ++P+K+LLPKL FF SKG S P+I K+V   P +L  SL
Sbjct: 476 SHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKRSL 535

Query: 129 DKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKY 188
           + +IIP+F++ +  L S++  +  +K+F+ IL+ DL      N+  L++ GVP SNI   
Sbjct: 536 ENQIIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGL 595

Query: 189 LQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWG 248
           L  QP  F++ P  F+E +E V +MG NP Q++FV+A+  +RA  KS+W++K+++Y++WG
Sbjct: 596 LMNQPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKRWG 655

Query: 249 LSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPR 308
            SEEEI LAF + PW M+ SEDKI   MDFFVNKMG E+S  ARRP L+S SL+KRI+PR
Sbjct: 656 WSEEEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPR 715

Query: 309 GYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 361
             V QVLLSKGLI K  +L   F+S+E  F+ KF++ +KE+ P LL L  +++
Sbjct: 716 YSVVQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLEHKEM 768

HSP 2 Score: 298.1 bits (762), Expect = 1.4e-77
Identity = 144/303 (47.52%), Postives = 214/303 (70.63%), Query Frame = 1


Query: 58  KRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVC 117
           K  +V+A    HGFS++Q S + K  PQ+L ++P+K+LLPKL FF SKG S P++ K+V 
Sbjct: 82  KPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKLQFFYSKGTSKPDVAKIVA 141

Query: 118 SFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQI 177
           S P ++  SL+ ++IP++++ +  L S++  +  +K+F+ IL+ D+      N+  L++ 
Sbjct: 142 SSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRILLFDIHTYVASNMNALQEF 201

Query: 178 GVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWD 237
           GVP SNI   L+ QP  F++ P  F+E +E V +MGFNP Q++FV+AV  +RA  KS+W+
Sbjct: 202 GVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKSSWE 261

Query: 238 KKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLS 297
           +K+++Y+ WG SEEEI LAF + PW M+ SEDKI   MDFFVNKMG E+S  ARRP+L+S
Sbjct: 262 RKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFVNKMGRESSLIARRPVLIS 321

Query: 298 LSLKKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYK 357
            SL+KRI+PR  V QVLLSKGLI K  +L   F+S+E  F+ KF+N +KE+ P L++LY+
Sbjct: 322 HSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLHKFVNVYKEEAPQLMKLYQ 381

Query: 358 QKL 361
           +K+
Sbjct: 382 EKI 384

[Close]

BLAST of MELO3C006632 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 4.2e-77
Identity = 158/348 (45.40%), Postives = 227/348 (65.23%), Query Frame = 1


Query: 14  SSSVFSHGFSECPLK-SLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVIALLADHGFS 73
           SSS  S   SE P   ++ YL  S  +      +       +  +K  +V+AL   HGFS
Sbjct: 40  SSSSTSISTSEKPHPFTVSYLINSCGLSHKDARSASKYVHFESPDKPNSVLALFNSHGFS 99

Query: 74  ESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRII 133
           ++Q S + K+ PQ+L ++P+K+LLPKL FF SKG S P+I K+V   P +L  SL+ +II
Sbjct: 100 KTQTSKIXKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKRSLENQII 159

Query: 134 PAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQP 193
           P+F++ +  L S++  +  +K+F+ IL+ DL      N+  L++ GVP SNI   L  QP
Sbjct: 160 PSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMNQP 219

Query: 194 RVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEE 253
             F++ P  F+E +E V  MGFNP Q++FV+A+  +RA  K +W++K+++Y++WG SEEE
Sbjct: 220 MAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEE 279

Query: 254 ILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQ 313
           I LAF + PW M+ SEDKI   MDFFVNKMG E+S  ARRP L+S SL+KRI+PR  V Q
Sbjct: 280 IRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVVQ 339

Query: 314 VLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 361
           VLLSKGLI K  +L   F+S+E  F+ KF++ +KE+ P LL LY++KL
Sbjct: 340 VLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006632 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 233.0 bits (593), Expect = 2.9e-61
Identity = 131/331 (39.58%), Postives = 203/331 (61.33%), Query Frame = 1


Query: 29  SLRYLSTSSDIVSSPTSAPLASNALQLKN--KRKAVIALLADHGFSESQISDLDKRFPQI 88
           +L YL  S  +  SP SA +AS  L L +  +   V+ LL DHGF+ +QIS L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEE 148
           L AN E  LLPKL FF S G+S   + + + S P +LT SL  ++IP+++++++VL S+E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTLASIKQFAGILVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETV 208
           K +A++++   + ++D   +  PNI  + + GVP+  I   L + P   +     F+   
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQQLQFVVAVFILRAM-TKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMM 268
           ++  EMGFNPQ+  FV+A+  L     KS WDK  EVY++WG SE++I+ AF++HP  MM
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 RSEDKINGAMDFFVNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLIKKHQN 328
            SE KIN  M++FVN+M       A+ P++L  SL+KRI+PR  V +VL+S GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 LILFFESSENCFIEKFINPHKEQIPGLLELY 357
           L       E  F+EK +  ++E++P L+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006632 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-50
Identity = 105/300 (35.00%), Postives = 181/300 (60.33%), Query Frame = 1


Query: 58  KRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVC 117
           K  +V+AL  DHGF+  QI+ + K FP++LS +PE  + PKL+FF S G S+ +  K++ 
Sbjct: 87  KPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMIS 146

Query: 118 SFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRIS--AGPNIEILK 177
           S P++L+ SL KR+IP +D ++++L  EE  +  +K+  GI    L+I+      + I +
Sbjct: 147 SSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIRCFSLKITHCVSLRVSICR 206

Query: 178 QIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKST 237
           ++GVPD +I   +Q  P  F     RF E + RV   GF+P++  FV A+      ++S 
Sbjct: 207 ELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESA 266

Query: 238 WDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPIL 297
            ++K ++++ +G S+E+ + A  R P  +  S++KI   +++ VN +G +A     RP++
Sbjct: 267 MERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVV 326

Query: 298 LSLSLKKRILPRGYVYQVLLSKGLIKKHQ-NLILFFESSENCFIEKFINPHKEQIPGLLE 355
           LSLS++KRI PR  V  +LLSKGL+KK   N     +   + F++KF+  +++++P L++
Sbjct: 327 LSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006632 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40
Identity = 103/324 (31.79%), Postives = 176/324 (54.32%), Query Frame = 1


Query: 43  PTSAPLASNALQLKN--KRKAVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLL 102
           P +  +A     LK+  + ++VI +L  + FS++QI    +  P+++  N EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPEIVKLVCSFPRVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAG--I 162
           FF+  G +   + K V     V+  SL K++IP  + +++++  + + L  I    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LVKDLRISAGPNIEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQ 222
           L +D  +   PNI  L+  G+  S +   L+ QPR+F ++  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFVVAVFILRAMTKSTWDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFF 282
              V AV  L ++++ T+D+KV+++   G SE+EI    RR P  +  SEDK+    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKMGCEASFAARRPILLSLSLKKRILPRGYVYQVLLSKGLI----KKHQNLILFFESSE 342
           + +MG E    A+RP +LS +L+KR++PR  V Q+L  KGL+    KK +N++   E +E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 NCFIEKFINPHKEQI-PGLLELYK 358
             F+EK++    ++I   LL  YK
Sbjct: 353 EAFLEKYVVRFGDEIAEELLVAYK 376

HSP 2 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 36/134 (26.87%), Postives = 62/134 (46.27%), Query Frame = 1


Query: 10  LLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAV----IAL 69
           LLR    +F+   SE  L+   Y+S + D+  +  S  L    + L +  +      + L
Sbjct: 201 LLRRQPRIFN--LSEEKLRG--YVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKL 260

Query: 70  LADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVLTG 129
              +GFSE +I+D+ +R P ++  + +K  L    + +  GL    + K  C    VL+ 
Sbjct: 261 FMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPC----VLSY 320

Query: 130 SLDKRIIPAFDYIQ 140
           +L+KR+IP    +Q
Sbjct: 321 NLEKRVIPRLKVLQ 326

[Close]

BLAST of MELO3C006632 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-29
Identity = 88/282 (31.21%), Postives = 147/282 (52.13%), Query Frame = 1


Query: 13  PSSSVFSHGFSECPLK---------SLRYLSTSSDIVSSPTSAPLASNALQLKNKRKAVI 72
           P+S+ FS   + C            ++ YL  S  + +    +     + + KN   +V+
Sbjct: 29  PTSNFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVL 88

Query: 73  ALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFPRVL 132
            LL  HGF+ SQIS + + +PQ+L A+ EKSL PKL F QS+G SS EI ++V S P +L
Sbjct: 89  NLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEIL 148

Query: 133 TGSLDKRIIPAFDYIQAVL----GSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGV 192
                K I   +D+I+  L       EK   S+ Q  G L   +R     N+ +L+++G+
Sbjct: 149 GKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ--GNLENKIR-----NVSVLRELGM 208

Query: 193 PDSNIFKYL--QYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWD 252
           P   +F  L    QP   +    +F+ET+++V EMGF+P   +FV A+ ++  M + T +
Sbjct: 209 PHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIE 268

Query: 253 KKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFV 280
           +KV +Y+  G    ++  +F++ P S+  SE K+  +++ F+
Sbjct: 269 EKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

HSP 2 Score: 66.2 bits (160), Expect = 4.7e-11
Identity = 72/305 (23.61%), Postives = 128/305 (41.97%), Query Frame = 1


Query: 63  IALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLS-SPEIVKLVCSFPR 122
           +  L   G S S+I+++    P+IL     K++     F +   L  S +  KL  S P+
Sbjct: 124 LQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQ 183

Query: 123 VLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNI--EILKQIGV 182
              G+L+ +I      +   LG   K L S+      L+ D +   G     E LK++  
Sbjct: 184 ---GNLENKIRNVS--VLRELGMPHKLLFSL------LISDSQPVCGKEKFEETLKKVVE 243

Query: 183 P--DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQL--QFVVAVFILRAMTKST 242
              D    K+++    ++ +N    +E V     +GF+   +   F      LR   K  
Sbjct: 244 MGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKM 303

Query: 243 WDKKVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPIL 302
            D  +E +   G S +E     +  P  +  S + +    +F V KM          P +
Sbjct: 304 LDS-IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAV 363

Query: 303 LSLSLKKRILPRGYVYQVLLSKGLIKKH-QNLILFFESSENCFIEKFINPH--KEQIPGL 358
              SL+KRI+PRG V + L+SKGL++    ++      ++  F+ +++  H  K+ +  L
Sbjct: 364 FGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTEL 416

[Close]

BLAST of MELO3C006632 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28
Identity = 70/213 (32.86%), Postives = 127/213 (59.62%), Query Frame = 1


Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           +V+ LL  +GF +SQIS + + +P++L  + EKSL PKL F +S+G SS E++++V + P
Sbjct: 86  SVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVP 145

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
            +L    ++ +   +D+++ ++   +    S  +      K  RI    NI +L+++GVP
Sbjct: 146 TILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGK----KGNRIR---NISVLRELGVP 205

Query: 181 DSNIFKYL--QYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDK 240
              +F  L  +YQP   +    +F+E++++V +MGF+P + +FV A+ ++  M++ T ++
Sbjct: 206 QKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEE 265

Query: 241 KVEVYRKWGLSEEEILLAFRRHPWSMMRSEDKI 272
           KV VY++ G SE EI   F++ P+ +  SE KI
Sbjct: 266 KVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

HSP 2 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 37/193 (19.17%), Postives = 87/193 (45.08%), Query Frame = 1


Query: 171 IEILKQIGVPDSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRA 230
           + + K++G  ++ I+   +  P     +  +     E + + G   ++   +++V   R 
Sbjct: 257 VNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEE---IISVLKSRP 316

Query: 231 MTKSTWDKKV----EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEA 290
               + ++K+    E++   G S ++  +  +R+P     S + +    +  V  M    
Sbjct: 317 QCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPL 376

Query: 291 SFAARRPILLSLSLKKRILPRGYVYQVLLSKGLI-KKHQNLILFFESSENCFIEKFINPH 350
                 P +L  SL+KRI+PR  V + L+SKGLI  ++  +      ++  F+++++  H
Sbjct: 377 EAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKH 436

Query: 351 KEQIPGLLELYKQ 359
            + +P L+ ++ +
Sbjct: 437 DKLVPKLMAIFNR 446

[Close]

BLAST of MELO3C006632 vs. NCBI nr
Match: gi|659076750|ref|XP_008438848.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 1.3e-167
Identity = 305/365 (83.56%), Postives = 324/365 (88.77%), Query Frame = 1


Query: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60
           M N+FRR +LLR  S VF  GFS+ PLKSLRYLSTSS+IVSSP SAPLASNA+QLKNKRK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           AVIALLADHGFSESQIS +DKR+PQILSANPEK LLPKLLFFQSKGLSSPEI KLVCSFP
Sbjct: 61  AVIALLADHGFSESQISSIDKRYPQILSANPEKILLPKLLFFQSKGLSSPEIAKLVCSFP 120

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
           RVL GSLD RIIPAFDYIQAVLGSEEKTLA IK F  IL  DLRIS GPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNI KY QYQPRVF  N +RFKETVERVTEMGFNPQ+LQF+VAVF LRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300
           EVYRKWGLSEEEI LAF+RHPW MM SEDKINGAMDFFVNK+GCE+SF ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360
           KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSEN FI+KFINPHKE+IPGLLE Y+QKL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006632 vs. NCBI nr
Match: gi|659076740|ref|XP_008438843.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo])

HSP 1 Score: 596.7 bits (1537), Expect = 2.8e-167
Identity = 301/365 (82.47%), Postives = 329/365 (90.14%), Query Frame = 1


Query: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60
           M N+FRR +LLR  S VF  GFS+ PLKSLRYLSTSS+IVSSP SAPLASNA+QLKNKRK
Sbjct: 1   MSNVFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKNKRK 60

Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           AVIALLADHGFSESQIS +DKRFPQILSANPEK LLPKLLFF+SKGLSSPEI K+V SFP
Sbjct: 61  AVIALLADHGFSESQISSIDKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
            VL+GSL+ RIIPAFDYIQAVLGSEEKTL  IK FAGIL +DLRIS GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKETV+RVTEMGFNPQQLQFVVAVFILR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300
           EVYRKWGLSEEEI LAF+RHPW MM SEDKING MDFFVNK+GCE+SF A RP+L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360
           KKRI PRGYVYQVLL+KGLIKKH ++ +F + SE  FIEK I+PHKEQIPGLLE Y+QKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006632 vs. NCBI nr
Match: gi|659076720|ref|XP_008438832.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo])

HSP 1 Score: 596.3 bits (1536), Expect = 3.7e-167
Identity = 302/365 (82.74%), Postives = 329/365 (90.14%), Query Frame = 1


Query: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60
           MYNLFRR +LLR  SSVFSHGFSE PLKSLRYLSTSS+IVSSP SA LASN +QLKN  K
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           AVIALLA+HGFS+SQISDL KRFPQILSANPEK LLPKLLFF+SKGLSSPEI K+V SFP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
            VL+GSL+ RIIPAFDYIQAVLGSEEKTL  IK FAGIL +DLRIS GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKETV+RVTEMGFNPQQLQFVVAVFILR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300
           EVYRKWGLSEEEI LAF+RHPW MM SEDKING MDFFVNK+GCE+SF A RP+L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360
           KKRI PRGYVYQVLL+KGLIKKH ++ +F + SE  FIEK I+PHKEQIPGLLE Y+QKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006632 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 594.7 bits (1532), Expect = 1.1e-166
Identity = 301/365 (82.47%), Postives = 322/365 (88.22%), Query Frame = 1


Query: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60
           M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q+KN RK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           A  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLLFFQSKGLSSPEIVKLVCSFP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
           RVL GSLD RIIPAFDYIQAVLGSEEKTLA IK F  IL  DLRIS GPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNI KY QYQPRVF  N +RFKETVERVTEMGFNPQ+LQF+VAVF LRAMTKSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300
           EVYRKWGLSEEEI LAF+RHPW MM SEDKINGAMDFFVNK+GCE+SF ARRP L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360
           KKR+ PRGYVYQVLL KGLIKK  N+ LF  SSEN FI+KFINPHKE+IPGLLE Y+QKL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of MELO3C006632 vs. NCBI nr
Match: gi|659076736|ref|XP_008438841.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo])

HSP 1 Score: 590.9 bits (1522), Expect = 1.5e-165
Identity = 295/365 (80.82%), Postives = 326/365 (89.32%), Query Frame = 1


Query: 1   MYNLFRRTILLRPSSSVFSHGFSECPLKSLRYLSTSSDIVSSPTSAPLASNALQLKNKRK 60
           M NLFRR +LLR  SSVFSHGFSECPLKSLR+LSTSS+IVSSP SA LASN +Q+KN RK
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  AVIALLADHGFSESQISDLDKRFPQILSANPEKSLLPKLLFFQSKGLSSPEIVKLVCSFP 120
           A  +   +HGFSESQISD+DK+FPQILSANPEK LLPKLLFF+SKGLSSPEI K+V SFP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 RVLTGSLDKRIIPAFDYIQAVLGSEEKTLASIKQFAGILVKDLRISAGPNIEILKQIGVP 180
            VL+GSL+ RIIPAFDYIQAVLGSEEKTL  IK FAGIL +DLRIS GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNIFKYLQYQPRVFLINPVRFKETVERVTEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240
           DSNIFKYLQY+PRVFL NP+RFKETV+RVTEMGFNPQQLQFVVAVFILR++TKSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGLSEEEILLAFRRHPWSMMRSEDKINGAMDFFVNKMGCEASFAARRPILLSLSL 300
           EVYRKWGLSEEEI LAF+RHPW MM SEDKING MDFFVNK+GCE+SF A RP+L+SLSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKHQNLILFFESSENCFIEKFINPHKEQIPGLLELYKQKL 360
           KKRI PRGYVYQVLL+KGLIKKH ++ +F + SE  FIEK I+PHKEQIPGLLE Y+QKL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 MDSRR 366
           MDSRR
Sbjct: 361 MDSRR 365

The following BLAST results are available for this feature:

BLAST of MELO3C006632 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	1.3e-81	45.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5B1K5_VITVI	6.9e-80	48.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
F6HDG2_VITVI	2.6e-79	48.22	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	6.7e-75	44.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
A5C3X9_VITVI	4.2e-77	45.40	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1	[more]

BLAST of MELO3C006632 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	2.9e-61	39.58	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.1e-50	35.00	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.1e-40	31.79	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.7e-29	31.21	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	2.5e-28	32.86	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006632 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076750\|ref\|XP_008438848.1\|	1.3e-167	83.56	PREDICTED: uncharacterized protein LOC103483819 isoform X11 [Cucumis melo]	[more]
gi\|659076740\|ref\|XP_008438843.1\|	2.8e-167	82.47	PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo]	[more]
gi\|659076720\|ref\|XP_008438832.1\|	3.7e-167	82.74	PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo]	[more]
gi\|659076738\|ref\|XP_008438842.1\|	1.1e-166	82.47	PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo]	[more]
gi\|659076736\|ref\|XP_008438841.1\|	1.5e-165	80.82	PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU57340	melon EST collection version 4.0	transcribed_cluster
MU62433	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006632T1	MELO3C006632T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62433	MU62433	transcribed_cluster
MU57340	MU57340	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 64..223 score: 5.0E-22coord: 233..334 score: 2.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 113..145 score: 0.055coord: 185..215 score: 370.0coord: 254..285 score: 10.0coord: 149..180 score: 920.0coord: 286..320 score: 25.0coord: 77..108 score: 0
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..360 score: 3.3E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..360 score: 3.3E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006632	Silver-seed gourd	carmeB0610
MELO3C006632	Silver-seed gourd	carmeB0828
MELO3C006632	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006632	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006632	Watermelon (97103) v2	mewmbB434
MELO3C006632	Watermelon (97103) v2	mewmbB448
MELO3C006632	Wax gourd	mewgoB521
MELO3C006632	Wax gourd	mewgoB529
MELO3C006632	Melon (DHL92) v3.5.1	memeB051
MELO3C006632	Cucumber (Gy14) v1	cgymeB307
MELO3C006632	Cucumber (Gy14) v1	cgymeB439
MELO3C006632	Cucurbita maxima (Rimu)	cmameB242
MELO3C006632	Cucurbita maxima (Rimu)	cmameB342
MELO3C006632	Cucurbita maxima (Rimu)	cmameB763
MELO3C006632	Cucurbita maxima (Rimu)	cmameB850
MELO3C006632	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006632	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006632	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006632	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006632	Wild cucumber (PI 183967)	cpimeB230
MELO3C006632	Wild cucumber (PI 183967)	cpimeB501
MELO3C006632	Cucumber (Chinese Long) v2	cumeB236
MELO3C006632	Cucumber (Chinese Long) v2	cumeB499
MELO3C006632	Watermelon (Charleston Gray)	mewcgB427
MELO3C006632	Watermelon (Charleston Gray)	mewcgB442
MELO3C006632	Watermelon (97103) v1	mewmB486
MELO3C006632	Watermelon (97103) v1	mewmB461
MELO3C006632	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006632	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006632	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006632	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006632	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006632	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006632	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006632	Cucumber (Gy14) v2	cgybmeB200