MELO3C006370 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006370
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA mismatch repair protein mutS
Locationchr6 : 2867254 .. 2872567 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGGGCAGCAACACGAACCGTCGTTTCTGCTTCCCGGTGGCGTTTTCTGGCTCTTTTGATTCGCTTCCCTCCGCGTAACTTCACCTCATTTACTCACTCGCCGGCATTTATGTAATGACCCCTTTTCTCCTCCTCTGCTTATCTCTCCCATGCATCTTGGACTCTCACTATTCGTCTTTTGTTTCAGTTCTGTTTTGGGTCTCTGTTTCTTCATTTGGTCATGTGGGTTTGGTATGTAGTTTGTAATTTCTACTCCTGATTTGTGTCCACAGAGAGTTTGAAATTTCTTGTAGCTTGTTTTCTTTTTTAAGAGATTGAGAAATGTGATATGGCGGCTGTGCATATTCCACATGTTTAGAAATACCCTTTATCACAGTCTGGAGAACCTGGGGAGATTGGTCTGCTCCTAAGAAGGTTAAGTCTTTGGGATTTTCAAAATTTTTTAACTAGTTGTCGAGCAATGATCGATTGATTTCTTTGGGAGAACTTCCCTGTTTTGCACTTTGAATTTTATAAACTACTTTTCTGGATGTAAACATCTTCGTTACGGTATCATCTTCTATGCGGGGGACTTCTTTGGTTGGTAGAAGTAATTTAGGAATGGCACTGGTACTGAGTGAGGTCGCTACATTGGTTTTTTTTTTTTTCTTCTTCTAATTAATTAATTAATTTATTATGAGAAACATATAGATTAATGTCATTGATAGAATGAAATTACAAAAGGGCAAAAGTGCTGTGTGAGTTACATATTACTTTTCTAATTTGTGTTTAATGTCTTTGGTTATTCTAATGCGTGGGGTTTTTTCATACGCCAAAATAGAGAAAGGCAACGGCTTGAAAAGTTGCATTGTTGGAAAAGCAGAAAATGTTCAAGAGGAAGCATCAAAGCTGCTAAGAAGTTTAAGGATAATAATAATGTCCAAGACGATAAGTTTCTTTCTCACATTCTATGGTGGAAAGAGGTGAACTACTAGCCTACATCAACAACTATCGTTTTGCCATTATCTTGATGCATTAGTTCCTGTTCAGATGCCGTTTCTCATGGTACTTTGTTTCTTGGATTTGCAGACGGTGGAATCATGCAAGAAGCCCTCATCTGTCCAGATGGTTAAGAGGCTTGACTTTTCCAATTTGCTAGGTTTAGATACAAACCTGAAAAATGGGAGGTGAGCTTGTGAGATAAACTTTGATTTGTTGTGGCATGTGCATACTGAGAATCGTTTTTCTGTTTGCTGGGCTTAAAGGCTGTTGTTTGCTCGTATGGACTTATGGAGATGCTATGTCATACTATTTAGACAATTAGCAGCTATGCTTACTGTTTTGCAGTCTTAAAGAAGGAACTCTTAACTGTGAGATTCTACAGTTCAAGGCAAAGTTTCCTCGAGAAGTTTTGCTCTGTAGAGTATGATATTTCTCCTCTTGCTTCTTGATTTTATCGTGCCAATTGCCCATTTAGATGTTAATTTGAATTAGAATTATCTTACAATTGTTTTGAACTTCTAGTTCTTGGCAGTTAATGACAATTCTATTTGTTTCTCTCTTTTCTACAGGTTGGAGATTTTTATGAAGCAATTGGAATAGATGCTTGCATACTTGTAGAGTATGCTGGATTAAATCCTTTTGGAGGTCAGCGTATGGATAGTATTCCAAAAGCTGGTTGCCCTGTTGTGGTATTGGATTTATTCCCATTTGATCTTTCTGTGTTAAATAATTGAAAGCATCATTATTCCTTTCTTACTCTAGTAACCTGTTTTCAGTGTCTTAATTGTTGTGCACTTCTCAACATTGTCAAATTAATGAAAGCATTGTTACGATTGAAACTCAGCCATATATTTTCAGTGTCTATGTTCCTTTCTTTAACCAATTGAAAGCATTATACTCCCATTTTGATTTTGGCAATGGCATGATGCAAGTGTGGGATTAGTATAATTTTATTGAGTTTGCATACCTGCAATGAGTCAATTACTGTACTGTGGTACAGTCTTCAAGACAACAGTCTTTTTCCCCCTTTTTTCACTCATTAGATTTCCAAAAATCTGGCCGTGTTTAAAGTTTCAACATCAGGTTCCTTTTGAGCTTGGCAATTATGTGTTTCATTTTTTGGGCCGTTAAGTTGGAAATCTTGTCTGGTGATCCTCGATTAAAAATGTGTTTCATTTTTTTCTGTTGATCTTTCTTTTTCAAGAATATCCGTACCACAAGCAGGGTACTTAACAATCATATTGTTTTTTCTCGACCCTTTTAGCGTCACTTTTGTGGCTACATTTTGTGCTGCCAGTTGTTTTATTTATGACCTCAAGATTGCCATTGATACACAAATATTTCATGATATTTAATCTTGGACTTAACATCTAATCCTTGTTGTTCTAAGTAAAGAACTACTTTGCAGAATCTTCGTCAAACTTTGGATGATCTGACACGTAATGGGTTCTCAGTGGTGAGCAATTGTGATGATTTGATACTTATCTTCTGGTATTTTTTTGGAAAAATTATGCCATACTTATCTTTTTCTTTCTTTCTTTCTTCTTCTTCTTTTAAATAAAGTTCTTATGGCATAAGTTAATGGGGATGAGTACACTGAGAAATAATAATTCATGTTGCAGATCAACAAGCCAGTAGGGAAGATAACTGTTTTCTATTTGTCCAATCACGAACCTTATTTTTATGTTGCAGATCAACAACCTTATTTTTATCTGATCGTCCCAGTGACATTTGCTATTATAGGCTATTTTTTTTAAACGGAAATGAGCCTCTTTATTAATATGAATAAAAGAGACTGACGCTAAAAGTACAAGAGAAATATATCAAAAGCAAAAAGGACTAATAGAACAAATACAACTTAAAATCGAGACAAGATAGAACAAAATAAGGATACAACGAGCTGGACAAGACCCTCTATAATCCGAGTAAAACAAGAACTAAATACGAAGCTATTTATAGGCTATTTTCACTATTTGAGTTTTGGATTTTTTTCCTAAGACTAAGTTCACAATCTGTGAGAAATATTGTGATACCAAGATCAGGGATTTCGTACCTCTTTCTTTCTACGAGCTCCATTTAGTTCACTTTGCATTTTTTGAGAAGTTAATTTTTAATTATGCTTAACAGTTTGTTTAATTTGGTTCTGTAGTGCATAGTGGAAGAAGTTCAGGGCCCAATTCAAGCTCGTTCTCGCAAAGGACGTTTTATATCTGGGTAAGTTCATTTAATAACTTGGTATTTTCTACTAAAACTTTGTATTTTATGATCTAATGGTTCAATCCTTCACCCTTGCTATTATCGAACCCAAAATTTTAGGTTTTATATTATTCCATGTGCAATCCAGTAATTGTTGTAAAATGGTGCTCAAACATTTTGTTCATAAGGAAGAATTTTCAAGAGGTAGAAGACTAAGAAGATTTAATGACTGAGTTAATCTGTGCATACAGGCATGCACACCCAGGCAGTCCTTATGTCTTTGGGCTTGTCGGGGTTGATCACGATCTTGACTTTCCAGAACCGATGCCTGTGATTGGTAGGTGATTTAGCACGTTCAATTGTTATTTAGTAAGATATTTTGTATGGATTAGTATTCTTTCCTGTGATAAATATGGTGTACTTGTTCTTGTGTTTTTTAACCTTTTTCTTGTATGGAAAGTACTTCCTGATATTCTCGCTTTTGGTTTTATAATAATTTGACTCTTACTAGCTTATTGTTACTTAAAATATTGAGTGCAACACATGCAGGAATATCTCGATCTGCAAGGGGCTATTGCTTGAGCCTTGTCATAGAGACCATGAAGACATATTCGTCAGAGGATGGTTTGACAGAAGAGGCCTTAGTTACTAAACTGCGCACTTGTCAATACCATCATTTATTTCTTCACACATCATTAAGGAACAACTCCTCAGGTTTGGTGTGGTCTGAATATGCAGAACTCTCAAGATACTGTTTTCAATAATCCTCATTCAGGACCTTCTTTTTACTGTTTTCTGGTCAATAGCTTTATTGTTTCACCCTAAAAAAAGGATTCTGAAGTAATATTAGTGATAGGAAAGATCAAATCTACAGGAATAGACTTTTCTTCCTTTTCTTGTGTTTAAAGGAAAAGTTGACGCGAGGATGAAATAATGTATTATATTTCTTCTTATCAGTGGAATTATAGTCGGTTCTCTCTCTCTCTTAAAAAAATGGTATTGAGGAAAAAAGATACATGGTGAAAAGGAAGGGATATGAAAGGGAAAACCATCTCAAATACACAAGGTTTAGGAGATTCCCCTTCCCCTCCCCCGCCTTTGTAATTACCACGATAGCTGGCTTGTCCCAAAAAGTTCACAAAATGGTTCCTTAATCATTACAGAATTGGAAGATCAAAGAAAAGTTTAAAAATTCCACGTTGTTACATTGTTACAGTATTATAATTGTCACTTAAACCTGCTTTGGCTTGTTTCCAAGGACAAATGACTGACCAATACTTTAACTATGACATATCGTGTTTTAATTTGCATAATTATCTGAGAAAATGACCTCAAATTAGTTTTTCAATTAAGAAAATAATTATGGAGGGATGAATAAGGAACTTTGGAATTTAGCTTTTTACTTGGCACAAATTTGATTAAAGCCATATGTATTGGTTGTTATACCAGATGCTTGGAAGAAGTATGCTGCTGTGTCTATGCCATATAAGAAATTTGTTGACTGTGTGTACTGTGTAGCATAATTTTGATGAAAGGTTCCTGGTTATTGATGATTGGAAGAAGTATGTTGCTGTCTGTGGCATTTCAAGAATTTTTTTTCTTCTTCTTATTGACACCATTCGCAAGCTTATAAGAGAGGCTCCTTATAGGCACTTGCCGCTGGGGTGAATTTGGTGAGGGTGGCCGGTTATGGGGGGAATGTAATCCCAGACATTTTGAGTGGTTCGATGGAAATCCTCTTGATAATCTTATTTCTAAGGTGTGCATTGCATCTATATCTCTTCTATTTCTATCAATAGCATCGCCTGACTTTTTATTTGTGTTGGTGTCAATTTAATTTATCTTCTGATCATTCCCAGGTTAAAGAGCTTTATGGTATTGATGATGAAGTTACATTTAGAAATGTTACAATATTGTCAGAAAATAGGCCACATCCGTTAACTCTAGGAACTGCAACACAGATTGGTTAGTTTTATTTCACTTGGATCCCATATAAAAAAATGCAATTTTAAATGATATTAAGCTGCATTTTCATACATCAAATGCATATAGGTGCCATACCAACAGAGGGAATACCTTGTTTGCTGAAGGTTTTGCTTCCATCCAATTGTGCTGGCCTTCCTGCATTGTGA

mRNA sequence

ATGTACTGGGCAGCAACACGAACCGTCGTTTCTGCTTCCCGGTGGCGTTTTCTGGCTCTTTTGATTCGCTTCCCTCCGCTTCTGTTTTGGGTCTCTGTTTCTTCATTTGGTCATGTGGGTTTGAAATACCCTTTATCACAGTCTGGAGAACCTGGGGAGATTGGTCTGCTCCTAAGAAGAGAAAGGCAACGGCTTGAAAAGTTGCATTGTTGGAAAAGCAGAAAATGTTCAAGAGGAAGCATCAAAGCTGCTAAGAAGTTTAAGGATAATAATAATGTCCAAGACGATAAGTTTCTTTCTCACATTCTATGGTGGAAAGAGACGGTGGAATCATGCAAGAAGCCCTCATCTGTCCAGATGGTTAAGAGGCTTGACTTTTCCAATTTGCTAGGTTTAGATACAAACCTGAAAAATGGGAGTCTTAAAGAAGGAACTCTTAACTGTGAGATTCTACAGTTCAAGGCAAAGTTTCCTCGAGAAGTTTTGCTCTGTAGAGTTGGAGATTTTTATGAAGCAATTGGAATAGATGCTTGCATACTTGTAGAGTATGCTGGATTAAATCCTTTTGGAGGTCAGCGTATGGATAGTATTCCAAAAGCTGGTTGCCCTGTTGTGGTATTGGATTTATTCCCATTTGATCTTTCTGTAACTACTTTGCAGAATCTTCGTCAAACTTTGGATGATCTGACACGTAATGGGTTCTCAGTGTGCATAGTGGAAGAAGTTCAGGGCCCAATTCAAGCTCGTTCTCGCAAAGGACGTTTTATATCTGGGCATGCACACCCAGGCAGTCCTTATGTCTTTGGGCTTGTCGGGGTTGATCACGATCTTGACTTTCCAGAACCGATGCCTGTGATTGGAATATCTCGATCTGCAAGGGGCTATTGCTTGAGCCTTGTCATAGAGACCATGAAGACATATTCGTCAGAGGATGGTTTGACAGAAGAGGCCTTAGTTACTAAACTGCGCACTTGTCAATACCATCATTTATTTCTTCACACATCATTAAGGAACAACTCCTCAGAGAGGCTCCTTATAGGCACTTGCCGCTGGGGTGAATTTGGTGAGGGTGGCCGGTTATGGGGGGAATGTAATCCCAGACATTTTGAGTGGTTCGATGGAAATCCTCTTGATAATCTTATTTCTAAGGTTAAAGAGCTTTATGGTATTGATGATGAAGTTACATTTAGAAATGTTACAATATTGTCAGAAAATAGGCCACATCCGTTAACTCTAGGAACTGCAACACAGATTGGTGCCATACCAACAGAGGGAATACCTTGTTTGCTGAAGGTTTTGCTTCCATCCAATTGTGCTGGCCTTCCTGCATTGTGA

Coding sequence (CDS)

ATGTACTGGGCAGCAACACGAACCGTCGTTTCTGCTTCCCGGTGGCGTTTTCTGGCTCTTTTGATTCGCTTCCCTCCGCTTCTGTTTTGGGTCTCTGTTTCTTCATTTGGTCATGTGGGTTTGAAATACCCTTTATCACAGTCTGGAGAACCTGGGGAGATTGGTCTGCTCCTAAGAAGAGAAAGGCAACGGCTTGAAAAGTTGCATTGTTGGAAAAGCAGAAAATGTTCAAGAGGAAGCATCAAAGCTGCTAAGAAGTTTAAGGATAATAATAATGTCCAAGACGATAAGTTTCTTTCTCACATTCTATGGTGGAAAGAGACGGTGGAATCATGCAAGAAGCCCTCATCTGTCCAGATGGTTAAGAGGCTTGACTTTTCCAATTTGCTAGGTTTAGATACAAACCTGAAAAATGGGAGTCTTAAAGAAGGAACTCTTAACTGTGAGATTCTACAGTTCAAGGCAAAGTTTCCTCGAGAAGTTTTGCTCTGTAGAGTTGGAGATTTTTATGAAGCAATTGGAATAGATGCTTGCATACTTGTAGAGTATGCTGGATTAAATCCTTTTGGAGGTCAGCGTATGGATAGTATTCCAAAAGCTGGTTGCCCTGTTGTGGTATTGGATTTATTCCCATTTGATCTTTCTGTAACTACTTTGCAGAATCTTCGTCAAACTTTGGATGATCTGACACGTAATGGGTTCTCAGTGTGCATAGTGGAAGAAGTTCAGGGCCCAATTCAAGCTCGTTCTCGCAAAGGACGTTTTATATCTGGGCATGCACACCCAGGCAGTCCTTATGTCTTTGGGCTTGTCGGGGTTGATCACGATCTTGACTTTCCAGAACCGATGCCTGTGATTGGAATATCTCGATCTGCAAGGGGCTATTGCTTGAGCCTTGTCATAGAGACCATGAAGACATATTCGTCAGAGGATGGTTTGACAGAAGAGGCCTTAGTTACTAAACTGCGCACTTGTCAATACCATCATTTATTTCTTCACACATCATTAAGGAACAACTCCTCAGAGAGGCTCCTTATAGGCACTTGCCGCTGGGGTGAATTTGGTGAGGGTGGCCGGTTATGGGGGGAATGTAATCCCAGACATTTTGAGTGGTTCGATGGAAATCCTCTTGATAATCTTATTTCTAAGGTTAAAGAGCTTTATGGTATTGATGATGAAGTTACATTTAGAAATGTTACAATATTGTCAGAAAATAGGCCACATCCGTTAACTCTAGGAACTGCAACACAGATTGGTGCCATACCAACAGAGGGAATACCTTGTTTGCTGAAGGTTTTGCTTCCATCCAATTGTGCTGGCCTTCCTGCATTGTGA

Protein sequence

MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRRERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQMVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVEEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLVIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRLWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGAIPTEGIPCLLKVLLPSNCAGLPAL*
Homology
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BLAST of MELO3C006370 vs. Swiss-Prot
Match: MSH1_ARATH (DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana GN=MSH1 PE=1 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.9e-158
Identity = 283/445 (63.60%), Postives = 338/445 (75.96%), Query Frame = 1 

Query: 1   MYWAATRT-VVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLR 60
           M+W ATR  VVS  +WRF           F+ S          Y    S +P    LL R
Sbjct: 1   MHWIATRNAVVSFPKWRF-----------FFRS---------SYRTYSSLKPSSPILLNR 60

Query: 61  RERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQ 120
           R     E + C +  K  +    A+KK K +++V  DK LSH++WWKE +++CKKPS++Q
Sbjct: 61  RYS---EGISCLRDGKSLKRITTASKKVKTSSDVLTDKDLSHLVWWKERLQTCKKPSTLQ 120

Query: 121 MVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACI 180
           +++RL ++NLLGLD +L+NGSLK+G LN E+LQFK++FPREVLLCRVG+FYEAIGIDACI
Sbjct: 121 LIERLMYTNLLGLDPSLRNGSLKDGNLNWEMLQFKSRFPREVLLCRVGEFYEAIGIDACI 180

Query: 181 LVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIV 240
           LVEYAGLNPFGG R DSIPKAGCP++               NLRQTLDDLTRNG+SVCIV
Sbjct: 181 LVEYAGLNPFGGLRSDSIPKAGCPIM---------------NLRQTLDDLTRNGYSVCIV 240

Query: 241 EEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSL 300
           EEVQGP  ARSRKGRFISGHAHPGSPYV+GLVGVDHDLDFP+PMPV+GISRSARGYC+  
Sbjct: 241 EEVQGPTPARSRKGRFISGHAHPGSPYVYGLVGVDHDLDFPDPMPVVGISRSARGYCMIS 300

Query: 301 VIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGR 360
           + ETMK YS +DGLTEEALVTKLRT + HHLFLH SLR+N+S     GTCRWGEFGEGG 
Sbjct: 301 IFETMKAYSLDDGLTEEALVTKLRTRRCHHLFLHASLRHNAS-----GTCRWGEFGEGGL 360

Query: 361 LWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIG 420
           LWGEC+ R+FEWF+G+ L  L+S+VK++YG+DDEV+FRNV + S+NRP PL LGTATQIG
Sbjct: 361 LWGECSSRNFEWFEGDTLSELLSRVKDVYGLDDEVSFRNVNVPSKNRPRPLHLGTATQIG 402

Query: 421 AIPTEGIPCLLKVLLPSNCAGLPAL 445
           A+PTEGIPCLLKVLLPS C+GLP+L
Sbjct: 421 ALPTEGIPCLLKVLLPSTCSGLPSL 402

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BLAST of MELO3C006370 vs. TrEMBL
Match: B3U2A3_CUCSA (DNA mismatch repair protein OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 1.2e-222
Identity = 391/444 (88.06%), Postives = 400/444 (90.09%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F                S +  P  I      
Sbjct: 60  MYWAATRTVVSASRWRFLALLIRFPPRNF---------------TSVTHSPAFI------ 119

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQ+LEKLHCWKSRK SRGSIKAAKKFKDNN +QD+KFLSHILWWKETVESCKKPSSVQ+
Sbjct: 120 ERQQLEKLHCWKSRKGSRGSIKAAKKFKDNNILQDNKFLSHILWWKETVESCKKPSSVQL 179

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 180 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 239

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV         + TT +NLRQTLDDLTRNGFSVCIVE
Sbjct: 240 VEYAGLNPFGGQRMDSIPKAGCPVVN--------TRTTSRNLRQTLDDLTRNGFSVCIVE 299

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYC+SLV
Sbjct: 300 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCMSLV 359

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL
Sbjct: 360 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 419

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDG PLDNLISKVKELYG+DDEVTFRNVTI SENRPHPLTLGTATQIGA
Sbjct: 420 WGECNPRHFEWFDGKPLDNLISKVKELYGLDDEVTFRNVTISSENRPHPLTLGTATQIGA 474

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 480 IPTEGIPCLLKVLLPSNCAGLPAL 474

[Close]
BLAST of MELO3C006370 vs. TrEMBL
Match: A0A0A0L490_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134540 PE=4 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 5.6e-217
Identity = 384/444 (86.49%), Postives = 391/444 (88.06%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F                S +  P  I      
Sbjct: 60  MYWAATRTVVSASRWRFLALLIRFPPRNF---------------TSVTHSPAFI------ 119

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQ+LEKLHCWKSRK SRGSIKAAKKFKDNN +QD+KFLSHILWWKETVESCKKPSSVQ+
Sbjct: 120 ERQQLEKLHCWKSRKGSRGSIKAAKKFKDNNILQDNKFLSHILWWKETVESCKKPSSVQL 179

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 180 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 239

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV               NLRQTLDDLTRNGFSVCIVE
Sbjct: 240 VEYAGLNPFGGQRMDSIPKAGCPVV---------------NLRQTLDDLTRNGFSVCIVE 299

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYC+SLV
Sbjct: 300 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCMSLV 359

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS     GTCRWGEFGEGGRL
Sbjct: 360 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS-----GTCRWGEFGEGGRL 419

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDG PLDNLISKVKELYG+DDEVTFRNVTI SENRPHPLTLGTATQIGA
Sbjct: 420 WGECNPRHFEWFDGKPLDNLISKVKELYGLDDEVTFRNVTISSENRPHPLTLGTATQIGA 462

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 480 IPTEGIPCLLKVLLPSNCAGLPAL 462

[Close]
BLAST of MELO3C006370 vs. TrEMBL
Match: A0A061ENL4_THECC (MUTL protein isoform 1 OS=Theobroma cacao GN=TCM_021024 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 3.7e-176
Identity = 314/445 (70.56%), Postives = 351/445 (78.88%), Query Frame = 1 

Query: 1   MYWAATRT-VVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLR 60
           MYW ATR  VVS  RWR LALL+R P                   L++        LLL 
Sbjct: 1   MYWLATRNAVVSIPRWRSLALLLRSP-------------------LNKYASFNSSSLLLG 60

Query: 61  RERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQ 120
           R+     ++HC+K +K  R + K  +KFK  N   DDK LSHI+WWKE ++ C+KPS++ 
Sbjct: 61  RQ---FGQIHCFKDKKILRETTKFTRKFKAPNRALDDKDLSHIIWWKERLQLCRKPSTLN 120

Query: 121 MVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACI 180
           +VKRL +SNLLG+D NLKNGSLKEGTLNCEILQFK+KFPREVLLCRVGDFYEA+GIDACI
Sbjct: 121 LVKRLVYSNLLGVDVNLKNGSLKEGTLNCEILQFKSKFPREVLLCRVGDFYEALGIDACI 180

Query: 181 LVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIV 240
           LVEYAGLNPFGG R DSIP+AGCPVV               NLRQTLDDLTRNG+SVCIV
Sbjct: 181 LVEYAGLNPFGGLRSDSIPRAGCPVV---------------NLRQTLDDLTRNGYSVCIV 240

Query: 241 EEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSL 300
           EEVQGP QARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPV+GISRSARGYC++L
Sbjct: 241 EEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISRSARGYCITL 300

Query: 301 VIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGR 360
           V+ETMKTYSSEDGLTEEALVTKLR C+YHHLFLH SLR+N+S     GTCRWGEFG GG 
Sbjct: 301 VLETMKTYSSEDGLTEEALVTKLRMCRYHHLFLHLSLRDNAS-----GTCRWGEFGAGGL 360

Query: 361 LWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIG 420
           LWGEC  RHFEWF+GNP+  L+ KVKELYG+DDEV+FRNVT+ SE+RP PL LGTATQIG
Sbjct: 361 LWGECTTRHFEWFEGNPVTELLYKVKELYGLDDEVSFRNVTVPSESRPRPLHLGTATQIG 403

Query: 421 AIPTEGIPCLLKVLLPSNCAGLPAL 445
           AIPTEGIPCLLKVLLPSNC GLPAL
Sbjct: 421 AIPTEGIPCLLKVLLPSNCTGLPAL 403

[Close]
BLAST of MELO3C006370 vs. TrEMBL
Match: M5XM99_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000475mg PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 1.1e-175
Identity = 316/445 (71.01%), Postives = 351/445 (78.88%), Query Frame = 1 

Query: 1   MYWAATRT-VVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLR 60
           MYW ATR  VVS  R R LALL+R P                K   S    P  +G    
Sbjct: 1   MYWLATRNGVVSLPRCRHLALLLRSP--------------SRKCSSSFIPSPPLLG---- 60

Query: 61  RERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQ 120
               +  ++ C+K +K  RGS KA  K    NN  D++ LS+ILWWKE +E C+KPS+VQ
Sbjct: 61  ----QFRRIRCFKDQKVLRGSRKATNKLNALNNFLDERVLSNILWWKERMEMCRKPSTVQ 120

Query: 121 MVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACI 180
           +VKRLD+SNLLGLD NLKNGSLKEGTLN EILQFK+KFPREVLLCRVGDFYEA+GIDACI
Sbjct: 121 LVKRLDYSNLLGLDVNLKNGSLKEGTLNWEILQFKSKFPREVLLCRVGDFYEALGIDACI 180

Query: 181 LVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIV 240
           LVEYAGLNPFGG R DSIP+AGCPVV               NLRQTLDDLTRNGFSVCIV
Sbjct: 181 LVEYAGLNPFGGLRSDSIPRAGCPVV---------------NLRQTLDDLTRNGFSVCIV 240

Query: 241 EEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSL 300
           EEVQGP QARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPV+GIS SARGYC++ 
Sbjct: 241 EEVQGPTQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVVGISHSARGYCINF 300

Query: 301 VIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGR 360
           V+ETMKTYSSEDGLTEEALVTKLRTC+YHHLFLH SLR+N S     GTCRWGEFGEGG 
Sbjct: 301 VLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHMSLRSNFS-----GTCRWGEFGEGGL 360

Query: 361 LWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIG 420
           LWGEC+ RHFEWF+GNP+ +L+SKVK+LYG+D++VTFRNV++ SENRPHPLTLGTATQIG
Sbjct: 361 LWGECSGRHFEWFEGNPVIDLLSKVKDLYGLDEDVTFRNVSVSSENRPHPLTLGTATQIG 403

Query: 421 AIPTEGIPCLLKVLLPSNCAGLPAL 445
           AIPTEGIPCLLKVLLPSNC GLP L
Sbjct: 421 AIPTEGIPCLLKVLLPSNCTGLPLL 403

[Close]
BLAST of MELO3C006370 vs. TrEMBL
Match: B9SQS1_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_1217070 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 3.0e-170
Identity = 301/445 (67.64%), Postives = 344/445 (77.30%), Query Frame = 1 

Query: 1   MYWAATRT-VVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLR 60
           MYW ATR  VVS  +WR   L +R P    ++S S       + PL  +           
Sbjct: 1   MYWLATRNAVVSLPKWRSFTLFLRSPAATKFISFS-------RSPLLLNS---------- 60

Query: 61  RERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQ 120
              + +E+++C K  K  +G  + +KK K +NN+  DK LSHI+WWKE +  C+KPS+VQ
Sbjct: 61  ---RNVERINCLKDGKILKGVTRGSKKLKASNNILGDKDLSHIIWWKERLHQCRKPSTVQ 120

Query: 121 MVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACI 180
           +VKRL +SNLLGL+  LKNGSLK+G LN E+LQFK+KFPREVLLCRVGDFYEAIGIDACI
Sbjct: 121 LVKRLMYSNLLGLNVELKNGSLKDGNLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACI 180

Query: 181 LVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIV 240
           LVEYAGLNPFGG R DS+P+AGCPVV               NLRQTLDDLTRNG+SVCIV
Sbjct: 181 LVEYAGLNPFGGLRTDSVPRAGCPVV---------------NLRQTLDDLTRNGYSVCIV 240

Query: 241 EEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSL 300
           EEVQGP QARSRKGRFISGHAHPG+PYVFGL GVDHDLDFPEPMPV+GISRSA GYC+  
Sbjct: 241 EEVQGPTQARSRKGRFISGHAHPGNPYVFGLAGVDHDLDFPEPMPVVGISRSASGYCIVS 300

Query: 301 VIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGR 360
           V+ETMKTYSSEDGLTEEALVTKLRTC+YHHLFLH SLR+NSS     GTCRWGEFGEGG 
Sbjct: 301 VLETMKTYSSEDGLTEEALVTKLRTCRYHHLFLHASLRHNSS-----GTCRWGEFGEGGL 360

Query: 361 LWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIG 420
           LWGECN RHFEWF+G+P   L+ KV+ELYG+DD +TFRNVT+ S+NRP PL LGTATQIG
Sbjct: 361 LWGECNARHFEWFEGDPFTELLFKVRELYGLDDGITFRNVTVPSDNRPRPLHLGTATQIG 405

Query: 421 AIPTEGIPCLLKVLLPSNCAGLPAL 445
           AIPTEGIPCLLKVLLPSNC GLP L
Sbjct: 421 AIPTEGIPCLLKVLLPSNCTGLPVL 405

[Close]
BLAST of MELO3C006370 vs. TAIR10
Match: AT3G24320.1 (AT3G24320.1 MUTL protein homolog 1)

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-159
Identity = 283/445 (63.60%), Postives = 338/445 (75.96%), Query Frame = 1 

Query: 1   MYWAATRT-VVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLR 60
           M+W ATR  VVS  +WRF           F+ S          Y    S +P    LL R
Sbjct: 1   MHWIATRNAVVSFPKWRF-----------FFRS---------SYRTYSSLKPSSPILLNR 60

Query: 61  RERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQ 120
           R     E + C +  K  +    A+KK K +++V  DK LSH++WWKE +++CKKPS++Q
Sbjct: 61  RYS---EGISCLRDGKSLKRITTASKKVKTSSDVLTDKDLSHLVWWKERLQTCKKPSTLQ 120

Query: 121 MVKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACI 180
           +++RL ++NLLGLD +L+NGSLK+G LN E+LQFK++FPREVLLCRVG+FYEAIGIDACI
Sbjct: 121 LIERLMYTNLLGLDPSLRNGSLKDGNLNWEMLQFKSRFPREVLLCRVGEFYEAIGIDACI 180

Query: 181 LVEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIV 240
           LVEYAGLNPFGG R DSIPKAGCP++               NLRQTLDDLTRNG+SVCIV
Sbjct: 181 LVEYAGLNPFGGLRSDSIPKAGCPIM---------------NLRQTLDDLTRNGYSVCIV 240

Query: 241 EEVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSL 300
           EEVQGP  ARSRKGRFISGHAHPGSPYV+GLVGVDHDLDFP+PMPV+GISRSARGYC+  
Sbjct: 241 EEVQGPTPARSRKGRFISGHAHPGSPYVYGLVGVDHDLDFPDPMPVVGISRSARGYCMIS 300

Query: 301 VIETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGR 360
           + ETMK YS +DGLTEEALVTKLRT + HHLFLH SLR+N+S     GTCRWGEFGEGG 
Sbjct: 301 IFETMKAYSLDDGLTEEALVTKLRTRRCHHLFLHASLRHNAS-----GTCRWGEFGEGGL 360

Query: 361 LWGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIG 420
           LWGEC+ R+FEWF+G+ L  L+S+VK++YG+DDEV+FRNV + S+NRP PL LGTATQIG
Sbjct: 361 LWGECSSRNFEWFEGDTLSELLSRVKDVYGLDDEVSFRNVNVPSKNRPRPLHLGTATQIG 402

Query: 421 AIPTEGIPCLLKVLLPSNCAGLPAL 445
           A+PTEGIPCLLKVLLPS C+GLP+L
Sbjct: 421 ALPTEGIPCLLKVLLPSTCSGLPSL 402

[Close]
BLAST of MELO3C006370 vs. NCBI nr
Match: gi|659076009|ref|XP_008438450.1| (PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 1.5e-223
Identity = 396/444 (89.19%), Postives = 397/444 (89.41%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F    +SF H            P  I      
Sbjct: 1   MYWAATRTVVSASRWRFLALLIRFPPRNF----TSFTH-----------SPAFI------ 60

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM
Sbjct: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV               NLRQTLDDLTRNGFSVCIVE
Sbjct: 181 VEYAGLNPFGGQRMDSIPKAGCPVV---------------NLRQTLDDLTRNGFSVCIVE 240

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV
Sbjct: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS     GTCRWGEFGEGGRL
Sbjct: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS-----GTCRWGEFGEGGRL 360

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA
Sbjct: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 403

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 421 IPTEGIPCLLKVLLPSNCAGLPAL 403

[Close]
BLAST of MELO3C006370 vs. NCBI nr
Match: gi|659076007|ref|XP_008438449.1| (PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 1.5e-223
Identity = 396/444 (89.19%), Postives = 397/444 (89.41%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F    +SF H            P  I      
Sbjct: 1   MYWAATRTVVSASRWRFLALLIRFPPRNF----TSFTH-----------SPAFI------ 60

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM
Sbjct: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV               NLRQTLDDLTRNGFSVCIVE
Sbjct: 181 VEYAGLNPFGGQRMDSIPKAGCPVV---------------NLRQTLDDLTRNGFSVCIVE 240

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV
Sbjct: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS     GTCRWGEFGEGGRL
Sbjct: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS-----GTCRWGEFGEGGRL 360

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA
Sbjct: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 403

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 421 IPTEGIPCLLKVLLPSNCAGLPAL 403

[Close]
BLAST of MELO3C006370 vs. NCBI nr
Match: gi|168988197|gb|ACA35268.1| (DNA mismatch repair protein [Cucumis sativus])

HSP 1 Score: 780.4 bits (2014), Expect = 1.7e-222
Identity = 391/444 (88.06%), Postives = 400/444 (90.09%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F                S +  P  I      
Sbjct: 60  MYWAATRTVVSASRWRFLALLIRFPPRNF---------------TSVTHSPAFI------ 119

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQ+LEKLHCWKSRK SRGSIKAAKKFKDNN +QD+KFLSHILWWKETVESCKKPSSVQ+
Sbjct: 120 ERQQLEKLHCWKSRKGSRGSIKAAKKFKDNNILQDNKFLSHILWWKETVESCKKPSSVQL 179

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 180 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 239

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV         + TT +NLRQTLDDLTRNGFSVCIVE
Sbjct: 240 VEYAGLNPFGGQRMDSIPKAGCPVVN--------TRTTSRNLRQTLDDLTRNGFSVCIVE 299

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYC+SLV
Sbjct: 300 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCMSLV 359

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL
Sbjct: 360 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 419

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDG PLDNLISKVKELYG+DDEVTFRNVTI SENRPHPLTLGTATQIGA
Sbjct: 420 WGECNPRHFEWFDGKPLDNLISKVKELYGLDDEVTFRNVTISSENRPHPLTLGTATQIGA 474

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 480 IPTEGIPCLLKVLLPSNCAGLPAL 474

[Close]
BLAST of MELO3C006370 vs. NCBI nr
Match: gi|778678071|ref|XP_011650910.1| (PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 761.5 bits (1965), Expect = 8.0e-217
Identity = 384/444 (86.49%), Postives = 391/444 (88.06%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F                S +  P  I      
Sbjct: 1   MYWAATRTVVSASRWRFLALLIRFPPRNF---------------TSVTHSPAFI------ 60

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQ+LEKLHCWKSRK SRGSIKAAKKFKDNN +QD+KFLSHILWWKETVESCKKPSSVQ+
Sbjct: 61  ERQQLEKLHCWKSRKGSRGSIKAAKKFKDNNILQDNKFLSHILWWKETVESCKKPSSVQL 120

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV               NLRQTLDDLTRNGFSVCIVE
Sbjct: 181 VEYAGLNPFGGQRMDSIPKAGCPVV---------------NLRQTLDDLTRNGFSVCIVE 240

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYC+SLV
Sbjct: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCMSLV 300

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS     GTCRWGEFGEGGRL
Sbjct: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS-----GTCRWGEFGEGGRL 360

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDG PLDNLISKVKELYG+DDEVTFRNVTI SENRPHPLTLGTATQIGA
Sbjct: 361 WGECNPRHFEWFDGKPLDNLISKVKELYGLDDEVTFRNVTISSENRPHPLTLGTATQIGA 403

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 421 IPTEGIPCLLKVLLPSNCAGLPAL 403

[Close]
BLAST of MELO3C006370 vs. NCBI nr
Match: gi|700201672|gb|KGN56805.1| (hypothetical protein Csa_3G134540 [Cucumis sativus])

HSP 1 Score: 761.5 bits (1965), Expect = 8.0e-217
Identity = 384/444 (86.49%), Postives = 391/444 (88.06%), Query Frame = 1 

Query: 1   MYWAATRTVVSASRWRFLALLIRFPPLLFWVSVSSFGHVGLKYPLSQSGEPGEIGLLLRR 60
           MYWAATRTVVSASRWRFLALLIRFPP  F                S +  P  I      
Sbjct: 60  MYWAATRTVVSASRWRFLALLIRFPPRNF---------------TSVTHSPAFI------ 119

Query: 61  ERQRLEKLHCWKSRKCSRGSIKAAKKFKDNNNVQDDKFLSHILWWKETVESCKKPSSVQM 120
           ERQ+LEKLHCWKSRK SRGSIKAAKKFKDNN +QD+KFLSHILWWKETVESCKKPSSVQ+
Sbjct: 120 ERQQLEKLHCWKSRKGSRGSIKAAKKFKDNNILQDNKFLSHILWWKETVESCKKPSSVQL 179

Query: 121 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 180
           VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL
Sbjct: 180 VKRLDFSNLLGLDTNLKNGSLKEGTLNCEILQFKAKFPREVLLCRVGDFYEAIGIDACIL 239

Query: 181 VEYAGLNPFGGQRMDSIPKAGCPVVVLDLFPFDLSVTTLQNLRQTLDDLTRNGFSVCIVE 240
           VEYAGLNPFGGQRMDSIPKAGCPVV               NLRQTLDDLTRNGFSVCIVE
Sbjct: 240 VEYAGLNPFGGQRMDSIPKAGCPVV---------------NLRQTLDDLTRNGFSVCIVE 299

Query: 241 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCLSLV 300
           EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYC+SLV
Sbjct: 300 EVQGPIQARSRKGRFISGHAHPGSPYVFGLVGVDHDLDFPEPMPVIGISRSARGYCMSLV 359

Query: 301 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSSERLLIGTCRWGEFGEGGRL 360
           IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS     GTCRWGEFGEGGRL
Sbjct: 360 IETMKTYSSEDGLTEEALVTKLRTCQYHHLFLHTSLRNNSS-----GTCRWGEFGEGGRL 419

Query: 361 WGECNPRHFEWFDGNPLDNLISKVKELYGIDDEVTFRNVTILSENRPHPLTLGTATQIGA 420
           WGECNPRHFEWFDG PLDNLISKVKELYG+DDEVTFRNVTI SENRPHPLTLGTATQIGA
Sbjct: 420 WGECNPRHFEWFDGKPLDNLISKVKELYGLDDEVTFRNVTISSENRPHPLTLGTATQIGA 462

Query: 421 IPTEGIPCLLKVLLPSNCAGLPAL 445
           IPTEGIPCLLKVLLPSNCAGLPAL
Sbjct: 480 IPTEGIPCLLKVLLPSNCAGLPAL 462

The following BLAST results are available for this feature:
BLAST of MELO3C006370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MSH1_ARATH2.9e-15863.60DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana GN=MSH1 ... [more]
BLAST of MELO3C006370 vs. TrEMBL
Match NameE-valueIdentityDescription
B3U2A3_CUCSA1.2e-22288.06DNA mismatch repair protein OS=Cucumis sativus PE=4 SV=1[more]
A0A0A0L490_CUCSA5.6e-21786.49Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134540 PE=4 SV=1[more]
A0A061ENL4_THECC3.7e-17670.56MUTL protein isoform 1 OS=Theobroma cacao GN=TCM_021024 PE=4 SV=1[more]
M5XM99_PRUPE1.1e-17571.01Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000475mg PE=4 SV=1[more]
B9SQS1_RICCO3.0e-17067.64ATP binding protein, putative OS=Ricinus communis GN=RCOM_1217070 PE=4 SV=1[more]
BLAST of MELO3C006370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24320.11.6e-15963.60 MUTL protein homolog 1[more]
BLAST of MELO3C006370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076009|ref|XP_008438450.1|1.5e-22389.19PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Cucumis m... [more]
gi|659076007|ref|XP_008438449.1|1.5e-22389.19PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Cucumis m... [more]
gi|168988197|gb|ACA35268.1|1.7e-22288.06DNA mismatch repair protein [Cucumis sativus][more]
gi|778678071|ref|XP_011650910.1|8.0e-21786.49PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Cucumis s... [more]
gi|700201672|gb|KGN56805.1|8.0e-21786.49hypothetical protein Csa_3G134540 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007695DNA_mismatch_repair_MutS-lik_N
IPR016151DNA_mismatch_repair_MutS_N
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0006310 DNA recombination
biological_process GO:0006260 DNA replication
biological_process GO:0016458 gene silencing
biological_process GO:0016570 histone modification
biological_process GO:0043414 macromolecule methylation
biological_process GO:0006298 mismatch repair
biological_process GO:0000002 mitochondrial genome maintenance
biological_process GO:0040029 regulation of gene expression, epigenetic
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005524 ATP binding
molecular_function GO:0030983 mismatched DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006370T1MELO3C006370T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007695DNA mismatch repair protein MutS-like, N-terminalPFAMPF01624MutS_Icoord: 151..208
score: 2.
IPR016151DNA mismatch repair protein MutS, N-terminalGENE3DG3DSA:3.40.1170.10coord: 136..265
score: 3.7
IPR016151DNA mismatch repair protein MutS, N-terminalunknownSSF55271DNA repair protein MutS, domain Icoord: 140..264
score: 5.23
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR MUTS RELATED PROTEINScoord: 59..205
score: 7.9E-197coord: 221..441
score: 7.9E
NoneNo IPR availablePANTHERPTHR11361:SF82DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIALcoord: 59..205
score: 7.9E-197coord: 221..441
score: 7.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006370Cla021478Watermelon (97103) v1mewmB461
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006370Wild cucumber (PI 183967)cpimeB144
MELO3C006370Wild cucumber (PI 183967)cpimeB230
MELO3C006370Wild cucumber (PI 183967)cpimeB248
MELO3C006370Cucumber (Chinese Long) v2cumeB145
MELO3C006370Cucumber (Chinese Long) v2cumeB236
MELO3C006370Cucumber (Chinese Long) v2cumeB253
MELO3C006370Watermelon (Charleston Gray)mewcgB427
MELO3C006370Watermelon (Charleston Gray)mewcgB441
MELO3C006370Watermelon (Charleston Gray)mewcgB445
MELO3C006370Watermelon (97103) v1mewmB486
MELO3C006370Watermelon (97103) v1mewmB459
MELO3C006370Cucurbita pepo (Zucchini)cpemeB141
MELO3C006370Cucurbita pepo (Zucchini)cpemeB316
MELO3C006370Cucurbita pepo (Zucchini)cpemeB585
MELO3C006370Cucurbita pepo (Zucchini)cpemeB702
MELO3C006370Cucurbita pepo (Zucchini)cpemeB813
MELO3C006370Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006370Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006370Bottle gourd (USVL1VR-Ls)lsimeB382
MELO3C006370Cucumber (Gy14) v2cgybmeB126
MELO3C006370Cucumber (Gy14) v2cgybmeB200
MELO3C006370Cucumber (Gy14) v2cgybmeB216
MELO3C006370Silver-seed gourdcarmeB0236
MELO3C006370Silver-seed gourdcarmeB0240
MELO3C006370Silver-seed gourdcarmeB0780
MELO3C006370Silver-seed gourdcarmeB0941
MELO3C006370Silver-seed gourdcarmeB1050
MELO3C006370Cucumber (Chinese Long) v3cucmeB147
MELO3C006370Cucumber (Chinese Long) v3cucmeB236
MELO3C006370Cucumber (Chinese Long) v3cucmeB253
MELO3C006370Watermelon (97103) v2mewmbB434
MELO3C006370Watermelon (97103) v2mewmbB448
MELO3C006370Watermelon (97103) v2mewmbB451
MELO3C006370Wax gourdmewgoB514
MELO3C006370Wax gourdmewgoB534
MELO3C006370Wax gourdmewgoB545
MELO3C006370Wax gourdmewgoB552
MELO3C006370Melon (DHL92) v3.5.1memeB140
MELO3C006370Melon (DHL92) v3.5.1memeB147
MELO3C006370Cucumber (Gy14) v1cgymeB235
MELO3C006370Cucumber (Gy14) v1cgymeB439
MELO3C006370Cucumber (Gy14) v1cgymeB625
MELO3C006370Cucurbita maxima (Rimu)cmameB242
MELO3C006370Cucurbita maxima (Rimu)cmameB343
MELO3C006370Cucurbita maxima (Rimu)cmameB580
MELO3C006370Cucurbita maxima (Rimu)cmameB763
MELO3C006370Cucurbita maxima (Rimu)cmameB850
MELO3C006370Cucurbita moschata (Rifu)cmomeB230
MELO3C006370Cucurbita moschata (Rifu)cmomeB336
MELO3C006370Cucurbita moschata (Rifu)cmomeB568
MELO3C006370Cucurbita moschata (Rifu)cmomeB832
MELO3C006370Cucurbita moschata (Rifu)cmomeB755