MELO3C006196 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCACGATGTGGGCTTCCGTAGTTACCAACTGCGGCATCAAAATTCTGCGCTGCCGTTCCCTTTTGCTTCCACGTGTCCTCATCACTCCAATTCCACTTCCCATCTCTCCCTCTCTACTCTCCATGGATAGGAGCAATACCACATCCTCTTCTTCTTTTGCCCATTCCAGCAAAAGGTTAATTACGCTCCTTCATCATCTTTGAAAATGGCTGAAATTCGAAGGGAATCTTACATGGTTTTTTCTTTTTTTCTTTTTTTATCTCTGCTCTGTTTTTCGTATTTTAGTAACTAGACTTCAGATGAGTGTTTATTGATTTTGTTCGTTGTTCTTATTCTTTTGATTAGTGGTGGAAGAGGAAGAGGTTTGGATTTGAGGAATGATAGAGAAAGAACGAGAGGCCGTGGTGGAGGAGGCGGTGGCTCTGGTAAAGATAAAATTGACGCTCTTGGTAGACTCTTGTAAGCATATTTCGTCTGTTGGTATCTTGTTCGGGTGTCACTTGTCTTACATTACTTGTTAAACTTATTGTTTATTAAGCTTATGGAAGATTATGTGAATGCTCTTTTATTTTGAGTTTTTTTTTTTTAATCTATGGTGAAAAATATATCTACAATTAATGATTCATGAGGTTGAAGATTGATGTTAGATTATATAGTTACCTTTCCCATCAGCTTATTGGGTATTTAACTCGGTATTGGTCTAGGAGGTCCCGTGTTCAAACTCCTTTAGTGTTATTTACTCTTTAATTGACATTATTTAATTCTACTTATTGGGACTTCTCTATTTTTCCATATATTTCAAGACCATGATCAGGGGAGTGTGTTAGATGATATCGTACTAATTTTTCATCATCAACTTAAGCTTTTAGGTTAGTCGGTGATTAAACTCTTAATTTCATAGAATTTTGATATTTTCTTCTCCTTTCTCTTCAATTTTTGTTGGCCATGATCATTTTTTGGGGAAACATATATAAGGTTACGCAGGATAGGGAGATCGAACTTTAAAACGGAAACCTTTAATCAATTACGCATATATAGGCTTGAGAAAATTTTCACAGAGAGTAGAACTTAGTTCATGGTTTTCAAATGTTTTATTCCCGTTTTGTAGTGCTACCAGTTGACACTATATCATTATAAGGGGTGGTTTATTAACAACTTTGAACTAAGTTGTGAGGGTTCCAGGTTCTTATATATAACTGTTTATGATTGGTTGGTGAAGATTGAGTAAGCCAAAGTGGATGTTTGAGAGGAATTCAAAAGTTATCCATAATGCATATGGGATTTGTTTTCATTAGCAGTGTGATATGGTTGATTTTCTATCGGTTGATGTTTGCTCGTTTTAATGAACTTCAGGACACGAATCTTGCGTCACATGGCTTCTGAGTTAAACTTGAATATGAGGAACGATGGATATGTCAAGGTTGAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATATTCCACTGAGATCGCACACAATTGATGACATAAGGGAGGTTGGTCAAATAGTTTTCTTCTTTACATGCTTTAGCATCACTCTAATTTGTAGAACCAAACTGATATGTAACTTATCGTTTCCATTGGTCAATATTCGACAATGCTGTTGAATGTTGATTCATCTATTTATCTTGATCCCTTATCTAGAGTATTATTTATCTCCTAAGCTCAATTAGAACTTTACCACACATCTGCTCTGGACTGCAATTTTGATCTATTTATCCATGCTTTTTTCTCTTAATTAGTTTGACTGATGTATTTTCTTTTCCCCAACAACTTGTTAGTTTGCAGTTTGATTTTGTTTCTGTAAGCATCGAGCATTGACGAATAGTTTTTCCTTTTCAATGTCAGGCTGTTAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGATGAGAATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTTATTTTCTATCTTTATAGACCATCGAATATGTTGCTGCCTTTTAGCAAATATAATAAAGCTGATTGATTGAAAATTTGTTGATTGCTTCATTTAAGTCAAATGCATTTGATGCTTTCTAATATCGACTTATATATGGAATGAAAAATCCATTTCATCTTGTTTGCTATTGTTTCCGTATTTTGTTGCAATCCATTAGCCTTGTAAGATATGTAAATTGTTTACTATATAGGATTGTTTATTTAAGACTTCCCCACCTCTTTTAAGATAGTGATAATGGAACCAAATTGGCTGTTTCGTCTACACCATCATAAACTGGAAGAACTTCGTTTGCAGGCGGTTGAAACAGAAAGCTTATTAAAACCAATTCTTTCGGCTGAGGAGGTGCCAGGTATTATGATTCAATGTCCTTAAATTTTCTTCTTTTTCCATATATTAATCTTTCCTCCTCGATTTGCATGATGCGAGTATTTATGCATTCAAACTTCTACTTTTGTGATTCAATCGAACACTTTCTTTTCTCCCTCTCTACATGACAGTATGTGTCCATGGCACTTATAAGAAGAATTTGGAATCAATTCTGGATTCTGGTTTAAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTAAGTGAAGGAAAATCTATGTTATATTTCCCTGAAGAATTTTTCAAATAAATCATGATGTCACTTTGATTGGCAATTAGTGGTTTCTAAATTGCACATCTTCAACTATTTATCTATAGTAAATCAGGACGAATTTTAGGGTTTGCATCTAAATTTCTTCACAGGTAAATGAAATAACTAAATTCTTGTGTTGCTGTTGATGTTAACGTTTTCTAAACCATATTTCATATAACCATGATCATATAAGATAAAAGTAAAGGATTCCGATGTGAATATGAGGCCCTATACTTCTATAGTTATAACAATTTAGCCCTTGCACTTTACAATTTATAAATGACTTAGTGAAATCTTTTATAAATGTAGATTAATAAATTGATGGGAAATCAAATTTATTTATAAACTAAAAAGACTTGTTAGAATTGTTAGGTGATAAAATACACTTAATTTTCGCGCACGTTTTCATGATAGGAACTTAATCGTTACCGAGTAAAGGTTTAGATACTAATTTATTACAAATTTGATAGAAAGTGGACTAGGATTGATACCTGAAGTTTAGGAACAGAACTTTCTTATTATTTTTTAAAATCTGACAGGTATGAGACGAGATGTCAATGTTTTAATCTTTCTTGATGTCCAAAAAGCTCTTGAAGGTACCGTCGAACACTATTTTCTTTTCGATTGAGGTATACAAATAAGTGAATGAAACATGATTAGCACTCATCCCTAATATCTGTGTTTGCTTAAAACATTATTTCAGATGGAATGAAGCTTTACATTTCGGACAATCGGGTCATTCTGACTGAAGGTTTCGATGGCATGGTGCCAATAAAATACTTCCAAAAGATTGAGTCATGGCCGAATCGACAACCTATTTCGTTTTGAGCCTGGAGCAAACGATACATGATCATGAATTGTGTCTAGTGTTATTAAAACATTCATTTGGATTAGGAACTCGGGAAATCTTTGCGTTAAACTTGGCTGCAAACAGAACAGAAGTCTTTCATATGAACTTCTTGGGGAATCATTCATGAAGATTTGGCAACAATTAAAATTTCTTGGAGTTTGCCTCATTGGAGACTGATCTGAGAATTTAGATTTACGTTTTGGTTTGTCTTGGTCAGTTACTTACTAACGATTCTTATGTATACAACAACATATAAAGAGGATTTGTTTCGTTTATATACGTCAAGTCTTGATAATCGGGTGTTTGGTCCATGAAGCTTGTATGTCTGTGGATGAAACTTGTCCCATCTTTCTTTTCTCTTTTATACATTTAAC CTTCACGATGTGGGCTTCCGTAGTTACCAACTGCGGCATCAAAATTCTGCGCTGCCGTTCCCTTTTGCTTCCACGTGTCCTCATCACTCCAATTCCACTTCCCATCTCTCCCTCTCTACTCTCCATGGATAGGAGCAATACCACATCCTCTTCTTCTTTTGCCCATTCCAGCAAAAGTGGTGGAAGAGGAAGAGGTTTGGATTTGAGGAATGATAGAGAAAGAACGAGAGGCCGTGGTGGAGGAGGCGGTGGCTCTGGTAAAGATAAAATTGACGCTCTTGGTAGACTCTTGACACGAATCTTGCGTCACATGGCTTCTGAGTTAAACTTGAATATGAGGAACGATGGATATGTCAAGGTTGAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATATTCCACTGAGATCGCACACAATTGATGACATAAGGGAGGCTGTTAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGATGAGAATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGCGGTTGAAACAGAAAGCTTATTAAAACCAATTCTTTCGGCTGAGGAGGTGCCAGTATGTGTCCATGGCACTTATAAGAAGAATTTGGAATCAATTCTGGATTCTGGTTTAAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTATGAGACGAGATGTCAATGTTTTAATCTTTCTTGATGTCCAAAAAGCTCTTGAAGATGGAATGAAGCTTTACATTTCGGACAATCGGGTCATTCTGACTGAAGGTTTCGATGGCATGGTGCCAATAAAATACTTCCAAAAGATTGAGTCATGGCCGAATCGACAACCTATTTCGTTTTGAGCCTGGAGCAAACGATACATGATCATGAATTGTGTCTAGTGTTATTAAAACATTCATTTGGATTAGGAACTCGGGAAATCTTTGCGTTAAACTTGGCTGCAAACAGAACAGAAGTCTTTCATATGAACTTCTTGGGGAATCATTCATGAAGATTTGGCAACAATTAAAATTTCTTGGAGTTTGCCTCATTGGAGACTGATCTGAGAATTTAGATTTACGTTTTGGTTTGTCTTGGTCAGTTACTTACTAACGATTCTTATGTATACAACAACATATAAAGAGGATTTGTTTCGTTTATATACGTCAAGTCTTGATAATCGGGTGTTTGGTCCATGAAGCTTGTATGTCTGTGGATGAAACTTGTCCCATCTTTCTTTTCTCTTTTATACATTTAAC ATGTGGGCTTCCGTAGTTACCAACTGCGGCATCAAAATTCTGCGCTGCCGTTCCCTTTTGCTTCCACGTGTCCTCATCACTCCAATTCCACTTCCCATCTCTCCCTCTCTACTCTCCATGGATAGGAGCAATACCACATCCTCTTCTTCTTTTGCCCATTCCAGCAAAAGTGGTGGAAGAGGAAGAGGTTTGGATTTGAGGAATGATAGAGAAAGAACGAGAGGCCGTGGTGGAGGAGGCGGTGGCTCTGGTAAAGATAAAATTGACGCTCTTGGTAGACTCTTGACACGAATCTTGCGTCACATGGCTTCTGAGTTAAACTTGAATATGAGGAACGATGGATATGTCAAGGTTGAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATATTCCACTGAGATCGCACACAATTGATGACATAAGGGAGGCTGTTAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGATGAGAATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGCGGTTGAAACAGAAAGCTTATTAAAACCAATTCTTTCGGCTGAGGAGGTGCCAGTATGTGTCCATGGCACTTATAAGAAGAATTTGGAATCAATTCTGGATTCTGGTTTAAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTATGAGACGAGATGTCAATGTTTTAATCTTTCTTGATGTCCAAAAAGCTCTTGAAGATGGAATGAAGCTTTACATTTCGGACAATCGGGTCATTCTGACTGAAGGTTTCGATGGCATGGTGCCAATAAAATACTTCCAAAAGATTGAGTCATGGCCGAATCGACAACCTATTTCGTTTTGA MWASVVTNCGIKILRCRSLLLPRVLITPIPLPISPSLLSMDRSNTTSSSSFAHSSKSGGRGRGLDLRNDRERTRGRGGGGGGSGKDKIDALGRLLTRILRHMASELNLNMRNDGYVKVEDLLKLNLKTFANIPLRSHTIDDIREAVRKDNKQRFSLLDENGELLIRANQGHTVTAVETESLLKPILSAEEVPVCVHGTYKKNLESILDSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVQKALEDGMKLYISDNRVILTEGFDGMVPIKYFQKIESWPNRQPISF*
BLAST of MELO3C006196 vs. Swiss-Prot
Match: TRPT1_DANRE (tRNA 2'-phosphotransferase 1 OS=Danio rerio GN=trpt1 PE=2 SV=2) HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33 Identity = 86/216 (39.81%), Postives = 127/216 (58.80%), Query Frame = 1
BLAST of MELO3C006196 vs. Swiss-Prot
Match: TPT1_SCHPO (Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.12c PE=3 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 8.1e-32 Identity = 75/192 (39.06%), Postives = 117/192 (60.94%), Query Frame = 1
BLAST of MELO3C006196 vs. Swiss-Prot
Match: TRPT1_MOUSE (tRNA 2'-phosphotransferase 1 OS=Mus musculus GN=Trpt1 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28 Identity = 85/213 (39.91%), Postives = 125/213 (58.69%), Query Frame = 1
BLAST of MELO3C006196 vs. Swiss-Prot
Match: TRPT1_BOVIN (tRNA 2'-phosphotransferase 1 OS=Bos taurus GN=TRPT1 PE=2 SV=3) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-28 Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
BLAST of MELO3C006196 vs. Swiss-Prot
Match: TRPT1_HUMAN (tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TRPT1 PE=1 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26 Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = 1
BLAST of MELO3C006196 vs. TrEMBL
Match: A0A0A0L3T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126200 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 1.7e-158 Identity = 283/293 (96.59%), Postives = 288/293 (98.29%), Query Frame = 1
BLAST of MELO3C006196 vs. TrEMBL
Match: D7U7X7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00300 PE=4 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.2e-124 Identity = 238/304 (78.29%), Postives = 266/304 (87.50%), Query Frame = 1
BLAST of MELO3C006196 vs. TrEMBL
Match: A0A151TBS2_CAJCA (tRNA 2'-phosphotransferase 1 OS=Cajanus cajan GN=KK1_019074 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.4e-123 Identity = 239/304 (78.62%), Postives = 257/304 (84.54%), Query Frame = 1
BLAST of MELO3C006196 vs. TrEMBL
Match: W9RDX5_9ROSA (Putative tRNA 2'-phosphotransferase OS=Morus notabilis GN=L484_009657 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.6e-122 Identity = 231/308 (75.00%), Postives = 264/308 (85.71%), Query Frame = 1
BLAST of MELO3C006196 vs. TrEMBL
Match: K7MNY6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G254400 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 4.5e-122 Identity = 238/297 (80.13%), Postives = 257/297 (86.53%), Query Frame = 1
BLAST of MELO3C006196 vs. TAIR10
Match: AT2G45330.1 (AT2G45330.1 RNA 2'-phosphotransferase, Tpt1 / KptA family) HSP 1 Score: 398.7 bits (1023), Expect = 3.2e-111 Identity = 204/281 (72.60%), Postives = 230/281 (81.85%), Query Frame = 1
BLAST of MELO3C006196 vs. TAIR10
Match: AT5G23600.1 (AT5G23600.1 RNA 2'-phosphotransferase, Tpt1 / KptA family) HSP 1 Score: 333.6 bits (854), Expect = 1.3e-91 Identity = 161/208 (77.40%), Postives = 185/208 (88.94%), Query Frame = 1
BLAST of MELO3C006196 vs. NCBI nr
Match: gi|659075488|ref|XP_008438171.1| (PREDICTED: tRNA 2'-phosphotransferase 1 [Cucumis melo]) HSP 1 Score: 582.4 bits (1500), Expect = 4.4e-163 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1
BLAST of MELO3C006196 vs. NCBI nr
Match: gi|778677447|ref|XP_004133917.2| (PREDICTED: tRNA 2'-phosphotransferase 1 [Cucumis sativus]) HSP 1 Score: 566.6 bits (1459), Expect = 2.5e-158 Identity = 283/293 (96.59%), Postives = 288/293 (98.29%), Query Frame = 1
BLAST of MELO3C006196 vs. NCBI nr
Match: gi|731421252|ref|XP_010661668.1| (PREDICTED: tRNA 2'-phosphotransferase 1 isoform X3 [Vitis vinifera]) HSP 1 Score: 462.6 bits (1189), Expect = 5.1e-127 Identity = 237/298 (79.53%), Postives = 267/298 (89.60%), Query Frame = 1
BLAST of MELO3C006196 vs. NCBI nr
Match: gi|1009174727|ref|XP_015868494.1| (PREDICTED: tRNA 2'-phosphotransferase 1-like [Ziziphus jujuba]) HSP 1 Score: 458.0 bits (1177), Expect = 1.3e-125 Identity = 237/299 (79.26%), Postives = 263/299 (87.96%), Query Frame = 1
BLAST of MELO3C006196 vs. NCBI nr
Match: gi|731421250|ref|XP_010661667.1| (PREDICTED: tRNA 2'-phosphotransferase 1 isoform X2 [Vitis vinifera]) HSP 1 Score: 454.1 bits (1167), Expect = 1.8e-124 Identity = 236/302 (78.15%), Postives = 265/302 (87.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |