MELO3C006132 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006132
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	LIM domain-containing family protein
Location	chr6 : 1251907 .. 1253258 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTCTTCCCATTCTCTATTTCTATCGATCCCTTTTTCATAATCTTGTCTGAGATCTAATCCTCAGACACATTTGATAAACAATTGTATTTGTTTGTTAGTTTGTTGTTCTTTTGTAATTATACCCTTCTTGCAGTTTGTCGGAACGCTACCGTTTTTCGGTTCGAGTTCGTTGTTGTCGTAAAAAACAGAGAAGGAATAAAGATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAATCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGGTACGTTTTCTTTCTTTCCCTTTCATTCGTTCTTACTACGTCGTTCATTATGATATCGGTAATTTAACTCGAGTCGATCCATATAACAGATGAGTAGCTACTCATGGATGGATGGTGTCTTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTTAGCAAGAATTTTCAAAATGGTAAATATATTTTTGTTATTATACTTCTTTTCAAATCAACCTTTTGTTTTTAAGGAAAAAGAAGCCTTCCTAACATTCTCTCATTTTCATTCTATTGAAATGGCAACAGCCAAGCCTTCTGAGAAGCAAAATGATCTGGTATGCTCTCATTCTTTTCATTTTCCATGCAGTCAGCACGGTTTGATGTTTAGTCAATTTTTTTTTGTAAATTTTGTATTTAAATCACTCACAAACATGTCATAAAGCGTATAAGATTTTTCTTTTACATAGTTTAGGGATGTAGTCTCACAATATATACTCATAACTAGACGTATAACTTTGTAACTTTCAAAACGTGTAGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCGCAGCCTGCACGAAAACGGTTTATCCGTTGGAGAAGGTCTACAGTTCTTCATTTTTTTTCTTCTCAAAAGTTATATATATATATATAAGTAGAATGTTTCTAGATTTGTTGACTGATTAAAAGTTCTTTTGGTTCCTAAATTATAAAAAAAAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTACCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCAGTAGAGCAAACTTAA

mRNA sequence

AAAGTCTTCCCATTCTCTATTTCTATCGATCCCTTTTTCATAATCTTGTCTGAGATCTAATCCTCAGACACATTTGATAAACAATTGTATTTGTTTGTTAGTTTGTTGTTCTTTTGTAATTATACCCTTCTTGCAGTTTGTCGGAACGCTACCGTTTTTCGGTTCGAGTTCGTTGTTGTCGTAAAAAACAGAGAAGGAATAAAGATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAATCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCTTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTTAGCAAGAATTTTCAAAATGGTAAATATATTTTTTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCGCAGCCTGCACGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTACCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCAGTAGAGCAAACTTAA

Coding sequence (CDS)

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAATCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCTTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTTAGCAAGAATTTTCAAAATGGTAAATATATTTTTTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCGCAGCCTGCACGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTACCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCAGTAGAGCAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTHFEQLFKESGNFSKNFQNGKYIFSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPEPAEEEEGATEAQPQADEAVEQT*

Homology

[Close]

BLAST of MELO3C006132 vs. Swiss-Prot
Match: PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.1e-83
Identity = 146/205 (71.22%), Postives = 165/205 (80.49%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI---FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVTLE 120
           HFEQLFKESGNFSKNFQ GK      +R PSK+SS+F GTQDKCAAC KTVYPLEK+ +E
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQME 120

Query: 121 GECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK--- 180
           GEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++   
Sbjct: 121 GECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180

Query: 181 ATTPPPEP-------AEEEEGATEA 193
             T PPEP       A+EE G +E+
Sbjct: 181 GNTLPPEPTEDVAVEAKEENGVSES 205

[Close]

BLAST of MELO3C006132 vs. Swiss-Prot
Match: PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80
Identity = 147/209 (70.33%), Postives = 167/209 (79.90%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQN-GKYIFS----RAPSKLSSMFSGTQDKCAACTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQ  GK   S    +AP++LSS FSGTQDKCAAC KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 T---PPPEPAEEEEGATEAQPQADEAVEQ 203
           T      EP E+E   TE +  +D A E+
Sbjct: 183 TAEEDKTEPKEDEANPTE-EETSDAAAEE 210

[Close]

BLAST of MELO3C006132 vs. Swiss-Prot
Match: PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.6e-79
Identity = 141/213 (66.20%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ GK        +R PSKLSS FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----ATTPPPEPAEEEEGATEAQPQADEAVEQ 203
                  +PP +  + ++ A+  + + D+A  +
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of MELO3C006132 vs. Swiss-Prot
Match: WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-70
Identity = 120/184 (65.22%), Postives = 151/184 (82.07%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-GKYI-------FSRAPSKLSSMFSGTQDKCAACTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  K +        +R PS+L+ MFSGTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 177
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]

BLAST of MELO3C006132 vs. Swiss-Prot
Match: WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.3e-68
Identity = 115/182 (63.19%), Postives = 146/182 (80.22%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-------FSRAPSKLSSMFSGTQDKCAACTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+            +R PS+++  FSGTQ+KCA C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 176
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

[Close]

BLAST of MELO3C006132 vs. TrEMBL
Match: A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-110
Identity = 196/209 (93.78%), Postives = 197/209 (94.26%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQN K        SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEEEGATEAQPQADEA-VEQT 204
            TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 PTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of MELO3C006132 vs. TrEMBL
Match: A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.2e-95
Identity = 166/207 (80.19%), Postives = 181/207 (87.44%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ          +R PSKLSSMFSGTQDKC+ CTKTVYPLEKV+L
Sbjct: 61  HFEQLFKESGNFSKNFQTKSSDKPNDLTRTPSKLSSMFSGTQDKCSVCTKTVYPLEKVSL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPPEPAEEEEGATEAQPQADEAVEQT 204
           TPP +  +E+  A  +    ++AVEQ+
Sbjct: 181 TPPADHTDED--AEPSPRSGEQAVEQS 205

[Close]

BLAST of MELO3C006132 vs. TrEMBL
Match: G7L3J0_MEDTR (GATA type zinc finger transcription factor family protein OS=Medicago truncatula GN=MTR_7g076720 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 9.8e-92
Identity = 163/208 (78.37%), Postives = 179/208 (86.06%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHKSC KC+HCKG L+MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKY-----IFSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ         + +R PS+LSSMFSGT DKCA CTKTVYPLEK++
Sbjct: 61  HFEQLFKESGNFSKNFQAKSSEKINELMNRTPSRLSSMFSGTLDKCAVCTKTVYPLEKMS 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHF QLFM KGNYNHVL+AAANKK 
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFQQLFMEKGNYNHVLQAAANKKN 180

Query: 181 TTPPPEPAEEEEGA--TEAQPQADEAVE 202
           +TPPPEPA+EEE +   E + QA+E  E
Sbjct: 181 STPPPEPADEEEPSKPEETEAQAEEKSE 208

[Close]

BLAST of MELO3C006132 vs. TrEMBL
Match: V7B4U4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G067500g PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 155/208 (74.52%), Postives = 178/208 (85.58%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHK+CF+CSHCKG L+MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGTPYHKNCFRCSHCKGCLTMSTYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  +        ++ P++LSSMFSGT DKC+ C+KTVYPLEK+T
Sbjct: 61  HFEQLFKESGNFSKNFQTARSSDKQNEVNKTPNRLSSMFSGTLDKCSVCSKTVYPLEKMT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAH GCHLTHSSYAALDGVLYC+HHF QLFM KGNY+HVL+AAAN+K 
Sbjct: 121 LEGECYHKNCFRCAHAGCHLTHSSYAALDGVLYCRHHFQQLFMEKGNYHHVLQAAANRKN 180

Query: 181 TTPPPEPAEEEEGATEAQPQADEAVEQT 204
            TPPPEPAEEEE     +P+ +E  E++
Sbjct: 181 ATPPPEPAEEEEAPKPEEPEEEETEEKS 208

[Close]

BLAST of MELO3C006132 vs. TrEMBL
Match: A0A151TBJ6_CAJCA (Pollen-specific protein SF3 OS=Cajanus cajan GN=KK1_019013 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 7.0e-90
Identity = 158/209 (75.60%), Postives = 179/209 (85.65%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHK+CF+CSHCKG L+M +YS MDG+LYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKNCFRCSHCKGYLTMGTYSSMDGILYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQ  K        ++APS+LSSMFSGT DKC+ C+KTVYPLEK++
Sbjct: 61  HFEQLFKESGNFSKNFQQVKSADKQNEMNKAPSRLSSMFSGTLDKCSVCSKTVYPLEKMS 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAH GCHLTHSSYAALDGVLYC+HHF QLFM KGNY+HVL+AAANKK 
Sbjct: 121 LEGECYHKNCFRCAHAGCHLTHSSYAALDGVLYCRHHFQQLFMEKGNYHHVLQAAANKKN 180

Query: 181 TTPPPEPAEEEEGATEAQ-PQADEAVEQT 204
            TPPPEPAE  E A E + P+A+E  E+T
Sbjct: 181 VTPPPEPAEPAEPAEEEEPPKAEEGEEET 209

[Close]

BLAST of MELO3C006132 vs. TAIR10
Match: AT1G01780.1 (AT1G01780.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 308.9 bits (790), Expect = 2.3e-84
Identity = 146/205 (71.22%), Postives = 165/205 (80.49%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI---FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVTLE 120
           HFEQLFKESGNFSKNFQ GK      +R PSK+SS+F GTQDKCAAC KTVYPLEK+ +E
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQME 120

Query: 121 GECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK--- 180
           GEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++   
Sbjct: 121 GECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180

Query: 181 ATTPPPEP-------AEEEEGATEA 193
             T PPEP       A+EE G +E+
Sbjct: 181 GNTLPPEPTEDVAVEAKEENGVSES 205

[Close]

BLAST of MELO3C006132 vs. TAIR10
Match: AT3G61230.1 (AT3G61230.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 300.4 bits (768), Expect = 8.2e-82
Identity = 147/209 (70.33%), Postives = 167/209 (79.90%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQN-GKYIFS----RAPSKLSSMFSGTQDKCAACTKTVYPLEKVTL 121
           FEQLFKESGNFSKNFQ  GK   S    +AP++LSS FSGTQDKCAAC KTVYPLEK+T+
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122

Query: 122 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAT 181
           EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + +
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRRS 182

Query: 182 T---PPPEPAEEEEGATEAQPQADEAVEQ 203
           T      EP E+E   TE +  +D A E+
Sbjct: 183 TAEEDKTEPKEDEANPTE-EETSDAAAEE 210

[Close]

BLAST of MELO3C006132 vs. TAIR10
Match: AT2G45800.1 (AT2G45800.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 295.8 bits (756), Expect = 2.0e-80
Identity = 141/213 (66.20%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGN+SKNFQ GK        +R PSKLSS FSGTQDKCA C KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK- 180
           +EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN + 
Sbjct: 121 MEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRR 180

Query: 181 -----ATTPPPEPAEEEEGATEAQPQADEAVEQ 203
                  +PP +  + ++ A+  + + D+A  +
Sbjct: 181 SASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of MELO3C006132 vs. TAIR10
Match: AT2G39900.1 (AT2G39900.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 267.3 bits (682), Expect = 7.7e-72
Identity = 120/184 (65.22%), Postives = 151/184 (82.07%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-GKYI-------FSRAPSKLSSMFSGTQDKCAACTKTVYPLE 120
           HFEQLFKESG+FSKNFQ+  K +        +R PS+L+ MFSGTQDKCA CTKTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 177
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

[Close]

BLAST of MELO3C006132 vs. TAIR10
Match: AT3G55770.7 (AT3G55770.7 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 231.5 bits (589), Expect = 4.7e-61
Identity = 113/216 (52.31%), Postives = 144/216 (66.67%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQN-------GKYIFSRAPSKLSSMFSGTQDKCAACTKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+            +R PS+++  FSGTQ+KCA C+KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLE----------------------GECYH------------KNCFRCAHGGCHLTHSS 176
           +                         G CY             K+CF+C+HGGC ++ S+
Sbjct: 121 IHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSN 180

[Close]

BLAST of MELO3C006132 vs. NCBI nr
Match: gi|659075311|ref|XP_008438077.1| (PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo])

HSP 1 Score: 417.9 bits (1073), Expect = 1.0e-113
Identity = 199/209 (95.22%), Postives = 200/209 (95.69%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKY------IFSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120
           HFEQLFKESGNFSKNFQN K       + SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPEPAEEEEGATEAQPQADEAVEQT 204
           ATTPPPEPAEEEEGATEAQPQADEAVEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEAVEQT 209

[Close]

BLAST of MELO3C006132 vs. NCBI nr
Match: gi|659075313|ref|XP_008438078.1| (PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo])

HSP 1 Score: 417.9 bits (1073), Expect = 1.0e-113
Identity = 199/208 (95.67%), Postives = 199/208 (95.67%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQN K        SRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEEEGATEAQPQADEAVEQT 204
           TTPPPEPAEEEEGATEAQPQADEAVEQT
Sbjct: 181 TTPPPEPAEEEEGATEAQPQADEAVEQT 208

[Close]

BLAST of MELO3C006132 vs. NCBI nr
Match: gi|778677275|ref|XP_004134333.2| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-110
Identity = 196/210 (93.33%), Postives = 198/210 (94.29%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKY------IFSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120
           HFEQLFKESGNFSKNFQN K       + SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 204
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 210

[Close]

BLAST of MELO3C006132 vs. NCBI nr
Match: gi|778677278|ref|XP_011650764.1| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-110
Identity = 196/209 (93.78%), Postives = 197/209 (94.26%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNGKYI-----FSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVT 120
           HFEQLFKESGNFSKNFQN K        SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKVT
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 120

Query: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180
           LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA
Sbjct: 121 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 180

Query: 181 TTPPPEPAEEEEGATEAQPQADEA-VEQT 204
            TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 PTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of MELO3C006132 vs. NCBI nr
Match: gi|659075295|ref|XP_008438068.1| (PREDICTED: pollen-specific protein SF3-like [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.7e-95
Identity = 167/207 (80.68%), Postives = 181/207 (87.44%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNG----KYIFSRAPSKLSSMFSGTQDKCAACTKTVYPLEKVTL 120
           HFEQLFKESGNFSKNFQ      +   +R PSKLSSMF GTQDKC+ CTKTVYPLEKVTL
Sbjct: 61  HFEQLFKESGNFSKNFQTKPSERQNDLTRTPSKLSSMFCGTQDKCSVCTKTVYPLEKVTL 120

Query: 121 EGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKAT 180
           EGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK T
Sbjct: 121 EGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKKTT 180

Query: 181 TPPPEPAEEEEGATEAQPQADEAVEQT 204
           TPP E  +E+  A  +    ++AVEQ+
Sbjct: 181 TPPAEHTDED--AEPSPRSGEQAVEQS 205

The following BLAST results are available for this feature:

BLAST of MELO3C006132 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLI2B_ARATH	4.1e-83	71.22	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1	[more]
PLI2C_ARATH	1.5e-80	70.33	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1	[more]
PLI2A_ARATH	3.6e-79	66.20	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1	[more]
WLI2A_ARATH	1.4e-70	65.22	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1	[more]
WLI2B_ARATH	8.3e-68	63.19	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1	[more]

BLAST of MELO3C006132 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4A1_CUCSA	1.2e-110	93.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1	[more]
A0A0A0L6A8_CUCSA	4.2e-95	80.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1	[more]
G7L3J0_MEDTR	9.8e-92	78.37	GATA type zinc finger transcription factor family protein OS=Medicago truncatula...	[more]
V7B4U4_PHAVU	1.1e-90	74.52	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G067500g PE=4 SV=1	[more]
A0A151TBJ6_CAJCA	7.0e-90	75.60	Pollen-specific protein SF3 OS=Cajanus cajan GN=KK1_019013 PE=4 SV=1	[more]

BLAST of MELO3C006132 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01780.1	2.3e-84	71.22	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	8.2e-82	70.33	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	2.0e-80	66.20	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	7.7e-72	65.22	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	4.7e-61	52.31	GATA type zinc finger transcription factor family protein	[more]

BLAST of MELO3C006132 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075311\|ref\|XP_008438077.1\|	1.0e-113	95.22	PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo]	[more]
gi\|659075313\|ref\|XP_008438078.1\|	1.0e-113	95.67	PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo]	[more]
gi\|778677275\|ref\|XP_004134333.2\|	1.8e-110	93.33	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus...	[more]
gi\|778677278\|ref\|XP_011650764.1\|	1.8e-110	93.78	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus...	[more]
gi\|659075295\|ref\|XP_008438068.1\|	2.7e-95	80.68	PREDICTED: pollen-specific protein SF3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009247	glycolipid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009707	chloroplast outer membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008194	UDP-glycosyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006132T1	MELO3C006132T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	GENE3D	G3DSA:2.10.110.10		coord: 94..163 score: 4.4E-21coord: 4..71 score: 1.7
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 score: 3.2E-13coord: 101..156 score: 1.1
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 100..152 score: 7.2E-13coord: 9..61 score: 1.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44 scor
IPR001781	Zinc finger, LIM-type	PROFILE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.484coord: 99..159 score: 12
None	No IPR available	PANTHER	PTHR24206	FAMILY NOT NAMED	coord: 1..198 score: 8.1E
None	No IPR available	PANTHER	PTHR24206:SF22	PROTEIN PLIM2A	coord: 1..198 score: 8.1E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 93..126 score: 2.85E-9coord: 3..35 score: 1.43E-8coord: 36..76 score: 6.21E-15coord: 127..166 score: 1.07

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006132	CmaCh06G010970	Cucurbita maxima (Rimu)	cmameB763

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006132	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006132	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006132	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006132	Cucumber (Gy14) v2	cgybmeB200
MELO3C006132	Silver-seed gourd	carmeB0622
MELO3C006132	Silver-seed gourd	carmeB0647
MELO3C006132	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006132	Watermelon (97103) v2	mewmbB434
MELO3C006132	Wax gourd	mewgoB533
MELO3C006132	Melon (DHL92) v3.5.1	memeB150
MELO3C006132	Cucumber (Gy14) v1	cgymeB439
MELO3C006132	Cucurbita maxima (Rimu)	cmameB242
MELO3C006132	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006132	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006132	Wild cucumber (PI 183967)	cpimeB230
MELO3C006132	Cucumber (Chinese Long) v2	cumeB236
MELO3C006132	Watermelon (Charleston Gray)	mewcgB427
MELO3C006132	Watermelon (Charleston Gray)	mewcgB430
MELO3C006132	Watermelon (97103) v1	mewmB461
MELO3C006132	Watermelon (97103) v1	mewmB466