MELO3C006080 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006080
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Proline iminopeptidase
Location	chr6 : 915783 .. 916573 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCAATTTCAAAGTAGAGAGGATTTAGCCCATTTTCGAGCTTATAACGTAGTTAATGATGCTGCACCTTGGACCATTTTCGGTCAGGTATTTACTTCACTTTTTCTTTTTGTCGTTTAAGATTTTGGAATCAGCCATATATTGAACTTTACATGAAGCAAGGCTTTGTGATTTCTGAGAGTGGCTTTGCTTTTATAAACGTTATTCGTTTTTGTTGTCTCCTGTCTGTAGTAATTGCCTCACTGCAAATTCAAGGAAAGTCTCTTTTTCAACGTGCAGAGCTATGTTGGTTTTTGTGCAGTTATGTATTTGAGTTTTGCTCTACAAGGATTGGAACAAGTCCTCATAACCGGAGGAACCCCTCCAATTGGGAATGGATGGACGGCAGATTCTGTATATAGAGCATGGCTTTGAAAAAGTTGTAATTCGAAATGAGAAGTGCTACAAGAGGTATCCGCAGGATGTTGAAATTGCCTGCTGAGTTGTGAAATACTTGGCCGGAAATGGAGGTACAGGGTGAGTATGTTTGTCTAGAGTTCGTTTCGTGTATCATCAAAAATTGCTAAAAATTGGATCCAAATGCTTAAAATCCTTAGTTGGTATCTTCTTCACTTAAAAAGCCTTTCTTCCTTGTGTTTTTATGTAGGTTCTTCTTACTTCTGGTGGTGTCTTGACACCCAAACGAATCAGTTATTTCCTCCTCAATGCTGTCAATTTCTGTTAGTCAAATGACTCCAAGTTCATTCTTGAATGATGCTAAACAGTTGGTCATATTTGCAGATTGATAA

mRNA sequence

ATGTCGCAATTTCAAAGTAGAGAGGATTTAGCCCATTTTCGAGCTTATAACGTAGTTAATGATGCTGCACCTTGGACCATTTTCGGTCAGAGCTATGTTGGTTTTTGTGCAGTTATGTATTTGAGTTTTGCTCTACAAGGATTGGAACAAGTCCTCATAACCGGAGGAACCCCTCCAATTGGGAATGGATGGACGGCAGATTCTGTATATAGAGCATGGCTTTGAAAAAGTTGTAATTCGAAATGAGAAGTGCTACAAGAGGTATCCGCAGGATGTTGAAATTGCCTGCTGAGTTGTGAAATACTTGGCCGGAAATGGAGGTACAGGGTTCTTCTTACTTCTGGTGGTGTCTTGACACCCAAACGAATCAGTTATTTCCTCCTCAATGCTGTCAATTTCTGTTAGTCAAATGACTCCAAGTTCATTCTTGAATGATGCTAAACAGTTGGTCATATTTGCAGATTGATAA

Coding sequence (CDS)

ATGTCGCAATTTCAAAGTAGAGAGGATTTAGCCCATTTTCGAGCTTATAACGTAGTTAATGATGCTGCACCTTGGACCATTTTCGGTCAGAGCTATGTTGGTTTTTGTGCAGTTATGTATTTGAGTTTTGCTCTACAAGGATTGGAACAAGTCCTCATAACCGGAGGAACCCCTCCAATTGGGAATGGATGGACGGCAGATTCTGTATATAGAGCATGGCTTTGA

Protein sequence

MSQFQSREDLAHFRAYNVVNDAAPWTIFGQSYVGFCAVMYLSFALQGLEQVLITGGTPPIGNGWTADSVYRAWL*

Homology

[Close]

BLAST of MELO3C006080 vs. Swiss-Prot
Match: PIP_AERSO (Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 8.4e-10
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 1


Query: 5   QSREDLAHFRAYNVVNDAA----------PWTIFGQSYVGFCAVMYLSFALQGLEQVLIT 64
           Q  + L+HFRA ++V DA           PW++ GQS+ GFC++ YLS     L +V +T
Sbjct: 110 QQADYLSHFRADSIVRDAELIREQLSPDHPWSLLGQSFGGFCSLTYLSLFPDSLHEVYLT 169

Query: 65  GGTPPIGNGWTADSVYRA 73
           GG  PIG   +AD VYRA
Sbjct: 170 GGVAPIGR--SADEVYRA 185

[Close]

BLAST of MELO3C006080 vs. TrEMBL
Match: A0A0A0L423_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121050 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.9e-22
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQFQS +DLA    HFRA N+VNDA           APWTI GQSY GFCAV YLSFA 
Sbjct: 164 MSQFQSSDDLANYLKHFRADNIVNDAEFIRTRLVPDAAPWTILGQSYGGFCAVTYLSFAP 223

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIGNG TADSVYRA
Sbjct: 224 QGLKQVLITGGIPPIGNGCTADSVYRA 250

[Close]

BLAST of MELO3C006080 vs. TrEMBL
Match: A0A151RYG6_CAJCA (Proline iminopeptidase OS=Cajanus cajan GN=KK1_030705 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.9e-19
Identity = 55/87 (63.22%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQF+S ++LA    HFRA N+VNDA            PWTI GQSY GFCAV YLSFA 
Sbjct: 175 MSQFKSADELADFLKHFRADNIVNDAEFIRVRVVPDAGPWTILGQSYGGFCAVTYLSFAP 234

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIG G TA SVY+A
Sbjct: 235 QGLKQVLITGGIPPIGGGCTAGSVYKA 261

[Close]

BLAST of MELO3C006080 vs. TrEMBL
Match: M5XMD2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004322mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.0e-19
Identity = 54/87 (62.07%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQ +S  DLA    HFRA N+VNDA            PWTI GQS+ GFCAV YLSFA 
Sbjct: 170 MSQLKSEVDLADYLKHFRADNIVNDAEFIRVRLVPDAGPWTILGQSFGGFCAVTYLSFAP 229

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVL+TGG PPIGNG TAD+VY+A
Sbjct: 230 QGLKQVLLTGGIPPIGNGCTADAVYKA 256

[Close]

BLAST of MELO3C006080 vs. TrEMBL
Match: K7MUD9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G238400 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-18
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQF+S ++LA    +FRA N+VNDA            PWTI GQSY GFCAV YLSFA 
Sbjct: 174 MSQFKSADELADFLKYFRADNIVNDAEFIRVRLVPDAGPWTILGQSYGGFCAVTYLSFAP 233

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           +GL+QVLITGG PPIG G TADSVY+A
Sbjct: 234 KGLKQVLITGGIPPIGGGCTADSVYKA 260

[Close]

BLAST of MELO3C006080 vs. TrEMBL
Match: A0A0B2S853_GLYSO (Proline iminopeptidase OS=Glycine soja GN=glysoja_000935 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-18
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQF+S ++LA    +FRA N+VNDA            PWTI GQSY GFCAV YLSFA 
Sbjct: 174 MSQFKSADELADFLKYFRADNIVNDAEFIRVRLVPDAGPWTILGQSYGGFCAVTYLSFAP 233

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           +GL+QVLITGG PPIG G TADSVY+A
Sbjct: 234 KGLKQVLITGGIPPIGGGCTADSVYKA 260

[Close]

BLAST of MELO3C006080 vs. TAIR10
Match: AT3G61540.1 (AT3G61540.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 8.1e-19
Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDAA-----------PWTIFGQSYVGFCAVMYLSFAL 60
           M QF+S ++LA    HFRA N+V DA            PWTI GQS+ GFCA+ YLSFA 
Sbjct: 169 MLQFKSAKELADYLVHFRADNIVKDAEFIRVRLVPKADPWTILGQSFGGFCALTYLSFAP 228

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           +GL+QVLITGG PPIG   TAD VY A
Sbjct: 229 EGLKQVLITGGIPPIGKACTADDVYEA 255

[Close]

BLAST of MELO3C006080 vs. NCBI nr
Match: gi|700201345|gb|KGN56478.1| (hypothetical protein Csa_3G121050 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-22
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQFQS +DLA    HFRA N+VNDA           APWTI GQSY GFCAV YLSFA 
Sbjct: 164 MSQFQSSDDLANYLKHFRADNIVNDAEFIRTRLVPDAAPWTILGQSYGGFCAVTYLSFAP 223

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIGNG TADSVYRA
Sbjct: 224 QGLKQVLITGGIPPIGNGCTADSVYRA 250

[Close]

BLAST of MELO3C006080 vs. NCBI nr
Match: gi|778677096|ref|XP_004133842.2| (PREDICTED: uncharacterized protein LOC101216845 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-22
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQFQS +DLA    HFRA N+VNDA           APWTI GQSY GFCAV YLSFA 
Sbjct: 118 MSQFQSSDDLANYLKHFRADNIVNDAEFIRTRLVPDAAPWTILGQSYGGFCAVTYLSFAP 177

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIGNG TADSVYRA
Sbjct: 178 QGLKQVLITGGIPPIGNGCTADSVYRA 204

[Close]

BLAST of MELO3C006080 vs. NCBI nr
Match: gi|659075131|ref|XP_008437982.1| (PREDICTED: uncharacterized protein LOC103483239 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-22
Identity = 61/87 (70.11%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQF+S EDLA    HFRA N+VNDA           APWTI GQSY GFCAV YLSFA 
Sbjct: 164 MSQFRSAEDLANYLKHFRADNIVNDAEFIRTRLVPDAAPWTILGQSYGGFCAVTYLSFAP 223

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIGNG TADSVYRA
Sbjct: 224 QGLKQVLITGGIPPIGNGCTADSVYRA 250

[Close]

BLAST of MELO3C006080 vs. NCBI nr
Match: gi|1012336297|gb|KYP47601.1| (Proline iminopeptidase [Cajanus cajan])

HSP 1 Score: 100.9 bits (250), Expect = 9.9e-19
Identity = 55/87 (63.22%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQF+S ++LA    HFRA N+VNDA            PWTI GQSY GFCAV YLSFA 
Sbjct: 175 MSQFKSADELADFLKHFRADNIVNDAEFIRVRVVPDAGPWTILGQSYGGFCAVTYLSFAP 234

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVLITGG PPIG G TA SVY+A
Sbjct: 235 QGLKQVLITGGIPPIGGGCTAGSVYKA 261

[Close]

BLAST of MELO3C006080 vs. NCBI nr
Match: gi|596021539|ref|XP_007219016.1| (hypothetical protein PRUPE_ppa004322mg [Prunus persica])

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-18
Identity = 54/87 (62.07%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1   MSQFQSREDLA----HFRAYNVVNDA-----------APWTIFGQSYVGFCAVMYLSFAL 60
           MSQ +S  DLA    HFRA N+VNDA            PWTI GQS+ GFCAV YLSFA 
Sbjct: 170 MSQLKSEVDLADYLKHFRADNIVNDAEFIRVRLVPDAGPWTILGQSFGGFCAVTYLSFAP 229

Query: 61  QGLEQVLITGGTPPIGNGWTADSVYRA 73
           QGL+QVL+TGG PPIGNG TAD+VY+A
Sbjct: 230 QGLKQVLLTGGIPPIGNGCTADAVYKA 256

The following BLAST results are available for this feature:

BLAST of MELO3C006080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIP_AERSO	8.4e-10	43.59	Proline iminopeptidase OS=Aeromonas sobria GN=pip PE=1 SV=3	[more]

BLAST of MELO3C006080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L423_CUCSA	3.9e-22	70.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121050 PE=4 SV=1	[more]
A0A151RYG6_CAJCA	6.9e-19	63.22	Proline iminopeptidase OS=Cajanus cajan GN=KK1_030705 PE=4 SV=1	[more]
M5XMD2_PRUPE	9.0e-19	62.07	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004322mg PE=4 SV=1	[more]
K7MUD9_SOYBN	1.5e-18	62.07	Uncharacterized protein OS=Glycine max GN=GLYMA_18G238400 PE=4 SV=1	[more]
A0A0B2S853_GLYSO	1.5e-18	62.07	Proline iminopeptidase OS=Glycine soja GN=glysoja_000935 PE=4 SV=1	[more]

BLAST of MELO3C006080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61540.1	8.1e-19	56.32	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of MELO3C006080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201345\|gb\|KGN56478.1\|	5.6e-22	70.11	hypothetical protein Csa_3G121050 [Cucumis sativus]	[more]
gi\|778677096\|ref\|XP_004133842.2\|	5.6e-22	70.11	PREDICTED: uncharacterized protein LOC101216845 [Cucumis sativus]	[more]
gi\|659075131\|ref\|XP_008437982.1\|	7.3e-22	70.11	PREDICTED: uncharacterized protein LOC103483239 [Cucumis melo]	[more]
gi\|1012336297\|gb\|KYP47601.1\|	9.9e-19	63.22	Proline iminopeptidase [Cajanus cajan]	[more]
gi\|596021539\|ref\|XP_007219016.1\|	1.3e-18	62.07	hypothetical protein PRUPE_ppa004322mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006080T1	MELO3C006080T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10992	ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN	coord: 1..71 score: 6.4
None	No IPR available	PANTHER	PTHR10992:SF749	SUBFAMILY NOT NAMED	coord: 1..71 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006080	Cucurbita maxima (Rimu)	cmameB242
MELO3C006080	Cucurbita maxima (Rimu)	cmameB281
MELO3C006080	Cucurbita maxima (Rimu)	cmameB581
MELO3C006080	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006080	Cucurbita moschata (Rifu)	cmomeB271
MELO3C006080	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006080	Wild cucumber (PI 183967)	cpimeB230
MELO3C006080	Wild cucumber (PI 183967)	cpimeB291
MELO3C006080	Wild cucumber (PI 183967)	cpimeB399
MELO3C006080	Wild cucumber (PI 183967)	cpimeB402
MELO3C006080	Wild cucumber (PI 183967)	cpimeB502
MELO3C006080	Cucumber (Chinese Long) v2	cumeB297
MELO3C006080	Cucumber (Chinese Long) v2	cumeB236
MELO3C006080	Cucumber (Chinese Long) v2	cumeB402
MELO3C006080	Cucumber (Chinese Long) v2	cumeB404
MELO3C006080	Watermelon (Charleston Gray)	mewcgB420
MELO3C006080	Watermelon (Charleston Gray)	mewcgB421
MELO3C006080	Watermelon (Charleston Gray)	mewcgB427
MELO3C006080	Watermelon (Charleston Gray)	mewcgB430
MELO3C006080	Watermelon (Charleston Gray)	mewcgB440
MELO3C006080	Watermelon (97103) v1	mewmB478
MELO3C006080	Watermelon (97103) v1	mewmB461
MELO3C006080	Watermelon (97103) v1	mewmB466
MELO3C006080	Watermelon (97103) v1	mewmB480
MELO3C006080	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006080	Cucurbita pepo (Zucchini)	cpemeB698
MELO3C006080	Bottle gourd (USVL1VR-Ls)	lsimeB031
MELO3C006080	Bottle gourd (USVL1VR-Ls)	lsimeB033
MELO3C006080	Bottle gourd (USVL1VR-Ls)	lsimeB037
MELO3C006080	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C006080	Cucumber (Gy14) v2	cgybmeB200
MELO3C006080	Cucumber (Gy14) v2	cgybmeB252
MELO3C006080	Cucumber (Gy14) v2	cgybmeB349
MELO3C006080	Cucumber (Gy14) v2	cgybmeB351
MELO3C006080	Cucumber (Gy14) v2	cgybmeB439
MELO3C006080	Silver-seed gourd	carmeB0497
MELO3C006080	Silver-seed gourd	carmeB0607
MELO3C006080	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006080	Cucumber (Chinese Long) v3	cucmeB297
MELO3C006080	Cucumber (Chinese Long) v3	cucmeB411
MELO3C006080	Cucumber (Chinese Long) v3	cucmeB413
MELO3C006080	Cucumber (Chinese Long) v3	cucmeB511
MELO3C006080	Watermelon (97103) v2	mewmbB421
MELO3C006080	Watermelon (97103) v2	mewmbB423
MELO3C006080	Watermelon (97103) v2	mewmbB434
MELO3C006080	Watermelon (97103) v2	mewmbB439
MELO3C006080	Watermelon (97103) v2	mewmbB447
MELO3C006080	Melon (DHL92) v3.5.1	memeB018
MELO3C006080	Melon (DHL92) v3.5.1	memeB020
MELO3C006080	Melon (DHL92) v3.5.1	memeB055
MELO3C006080	Melon (DHL92) v3.5.1	memeB150
MELO3C006080	Melon (DHL92) v3.5.1	memeB151
MELO3C006080	Cucumber (Gy14) v1	cgymeB139
MELO3C006080	Cucumber (Gy14) v1	cgymeB223
MELO3C006080	Cucumber (Gy14) v1	cgymeB439
MELO3C006080	Cucumber (Gy14) v1	cgymeB499