MELO3C005998.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCAGTGGCGGCTGCTCCCCCTATCTTCCACTCCAGGAGAACCTACTCCTAGTCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCAGTGGCGGCTGCTCCCCCTATCTTCCACTCCAGGAGAACCTACTCCTAGTCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCAGTGGCGGCTGCTCCCCCTATCTTCCACTCCAGGAGAACCTACTCCTAGTCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA MVGDGNVFPQSPASLRLPHGLFKNQSRRFCHWLQPSKLYNFLNPPPRQWRLLPLSSTPGEPTPSPRISPPAASPKYEATVIPEASPPLKPARSPPVSPPRKSAEPRNSISPNSYQEPLKPTTPLLSTLVLPKSSDVTTIPSAIKPEVEQKTGPLKKSDPQVEYVSGMPPPSLQAKAINLAGDNIGAVMKINQFSDKSSGGEVTRKIETETGVQQENDEEKSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLHLDFSGKKDEAATVEEERGIAYDF
BLAST of MELO3C005998.2 vs. NCBI nr
Match: XP_008437853.1 (PREDICTED: WW domain-binding protein 11-like [Cucumis melo]) HSP 1 Score: 467.6 bits (1202), Expect = 2.9e-128 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of MELO3C005998.2 vs. NCBI nr
Match: XP_011650663.1 (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus] >KGN56396.1 hypothetical protein Csa_3G119310 [Cucumis sativus]) HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69 Identity = 150/216 (69.44%), Postives = 160/216 (74.07%), Query Frame = 0
BLAST of MELO3C005998.2 vs. NCBI nr
Match: XP_022147499.1 (uncharacterized protein LOC111016407 [Momordica charantia]) HSP 1 Score: 114.8 bits (286), Expect = 4.8e-22 Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of MELO3C005998.2 vs. NCBI nr
Match: XP_022147458.1 (vegetative cell wall protein gp1-like [Momordica charantia]) HSP 1 Score: 104.4 bits (259), Expect = 6.5e-19 Identity = 63/117 (53.85%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of MELO3C005998.2 vs. NCBI nr
Match: XP_022950117.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata]) HSP 1 Score: 94.0 bits (232), Expect = 8.8e-16 Identity = 65/138 (47.10%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TAIR10
Match: AT2G46630.1 (unknown protein) HSP 1 Score: 46.2 bits (108), Expect = 3.8e-05 Identity = 37/119 (31.09%), Postives = 50/119 (42.02%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TAIR10
Match: AT1G63310.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04 Identity = 29/89 (32.58%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TAIR10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH) HSP 1 Score: 43.5 bits (101), Expect = 2.5e-04 Identity = 31/91 (34.07%), Postives = 41/91 (45.05%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TrEMBL
Match: tr|A0A1S3AVL7|A0A1S3AVL7_CUCME (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 1.9e-128 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TrEMBL
Match: tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 9.2e-70 Identity = 150/216 (69.44%), Postives = 160/216 (74.07%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TrEMBL
Match: tr|A0A0A0L320|A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.5e-11 Identity = 63/168 (37.50%), Postives = 89/168 (52.98%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TrEMBL
Match: tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09 Identity = 54/136 (39.71%), Postives = 69/136 (50.74%), Query Frame = 0
BLAST of MELO3C005998.2 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 9.0e-09 Identity = 79/252 (31.35%), Postives = 106/252 (42.06%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |