MELO3C005956 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005956
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Location	chr6 : 195291 .. 196105 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACTCTCGTCTCCTGTTTGTCTATGCAACGCCAGAAACACACAAACAGACAAAACAAGAACAATCCACGAACCGATCGCATCCAGTGACCGCCGGTGAACTCGATCATGGCTCAGAACCAGCTCATCGACTCCCTCACCTCCCATATCTCCCTATACCATTCTACATCCCTTCCCCTCAACCCTGATACCAATTCCAATCCCAGGTCCTCCATCCTCAAATGGTTCTCTTCTCTCAGCGTCCACCAACGCCAAGCTCATCTCACGGTCGTTGATTTCAAATTCGTCCAAATCCTCATCCAAATGGTGGCCGAAGTTCGCAGACGAGGACACGGTTTCTTTATCATCCTTCCAGACATTCTCTCCACCGACCCTCTGCACTTACCTAGCTTATGCTTTAAGAAGTCCCGCGGACTACTGTCTCGTGTCTCCGAGTCCAACGAGTCCCAAAGGATGATTTTTGAGTCCACTCGATTATTCGGTTCCAGGGAAGGCGACAAGCTCGAGGAATGTTCTTGTTCGTTGAAGAACATCGATTCTATAACTGTAAGCGAGGAATTAGTCTCAAATGTGGATAAATTCGTCGAGGCGATGGATGGAGTTTCAAATGGAGCGTTTTTGAGAGGTGAAGGGGGTGACCTGGCGTCCCATTGGGCTGAATTAAATTGGTTAAAAGCGAAAGGATACTACAGTATGGAGGCCTTTGTGGCGAATAAGTTGGAGGTGGCTTTGAGATTGTCATGGATGAACTTGAATAATGGAAAAAAAGATCGGTAAAGTTCAAAGAGAAGGCTACAGCAACTGGCATGGCGACAA

mRNA sequence

TCACTCTCGTCTCCTGTTTGTCTATGCAACGCCAGAAACACACAAACAGACAAAACAAGAACAATCCACGAACCGATCGCATCCAGTGACCGCCGGTGAACTCGATCATGGCTCAGAACCAGCTCATCGACTCCCTCACCTCCCATATCTCCCTATACCATTCTACATCCCTTCCCCTCAACCCTGATACCAATTCCAATCCCAGGTCCTCCATCCTCAAATGGTTCTCTTCTCTCAGCGTCCACCAACGCCAAGCTCATCTCACGGTCGTTGATTTCAAATTCGTCCAAATCCTCATCCAAATGGTGGCCGAAGTTCGCAGACGAGGACACGGTTTCTTTATCATCCTTCCAGACATTCTCTCCACCGACCCTCTGCACTTACCTAGCTTATGCTTTAAGAAGTCCCGCGGACTACTGTCTCGTGTCTCCGAGTCCAACGAGTCCCAAAGGATGATTTTTGAGTCCACTCGATTATTCGGTTCCAGGGAAGGCGACAAGCTCGAGGAATGTTCTTGTTCGTTGAAGAACATCGATTCTATAACTGTAAGCGAGGAATTAGTCTCAAATGTGGATAAATTCGTCGAGGCGATGGATGGAGTTTCAAATGGAGCGTTTTTGAGAGGTGAAGGGGGTGACCTGGCGTCCCATTGGGCTGAATTAAATTGGTTAAAAGCGAAAGGATACTACAGTATGGAGGCCTTTGTGGCGAATAAGTTGGAGGTGGCTTTGAGATTGTCATGGATGAACTTGAATAATGGAAAAAAAGATCGGTAAAGTTCAAAGAGAAGGCTACAGCAACTGGCATGGCGACAA

Coding sequence (CDS)

ATGGCTCAGAACCAGCTCATCGACTCCCTCACCTCCCATATCTCCCTATACCATTCTACATCCCTTCCCCTCAACCCTGATACCAATTCCAATCCCAGGTCCTCCATCCTCAAATGGTTCTCTTCTCTCAGCGTCCACCAACGCCAAGCTCATCTCACGGTCGTTGATTTCAAATTCGTCCAAATCCTCATCCAAATGGTGGCCGAAGTTCGCAGACGAGGACACGGTTTCTTTATCATCCTTCCAGACATTCTCTCCACCGACCCTCTGCACTTACCTAGCTTATGCTTTAAGAAGTCCCGCGGACTACTGTCTCGTGTCTCCGAGTCCAACGAGTCCCAAAGGATGATTTTTGAGTCCACTCGATTATTCGGTTCCAGGGAAGGCGACAAGCTCGAGGAATGTTCTTGTTCGTTGAAGAACATCGATTCTATAACTGTAAGCGAGGAATTAGTCTCAAATGTGGATAAATTCGTCGAGGCGATGGATGGAGTTTCAAATGGAGCGTTTTTGAGAGGTGAAGGGGGTGACCTGGCGTCCCATTGGGCTGAATTAAATTGGTTAAAAGCGAAAGGATACTACAGTATGGAGGCCTTTGTGGCGAATAAGTTGGAGGTGGCTTTGAGATTGTCATGGATGAACTTGAATAATGGAAAAAAAGATCGGTAA

Protein sequence

MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNPRSSILKWFSSLSVHQRQAHLTVVDFKFVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIFESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDLASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKKDR*

Homology

[Close]

BLAST of MELO3C005956 vs. TrEMBL
Match: A0A0A0L8A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116880 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 9.6e-117
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNS--NPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQLIDSLTSHISLYHSTSLPLNPDTNS  NPRSSILKWFSSLSVHQRQAHLTVVDFK
Sbjct: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNLNPRSSILKWFSSLSVHQRQAHLTVVDFK 60

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           FVQILIQMVAEVR+RGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVS+SNESQRMIF
Sbjct: 61  FVQILIQMVAEVRKRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSQSNESQRMIF 120

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ESTRLFGSREGDKLEECSCSLKNIDSITVSEE VSNVDKFVEAMDGVSNGAFLRGEGGDL
Sbjct: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEEFVSNVDKFVEAMDGVSNGAFLRGEGGDL 180

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
           AS+WAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK
Sbjct: 181 ASNWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 222

[Close]

BLAST of MELO3C005956 vs. TrEMBL
Match: A0A0D2TBS7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 155/222 (69.82%), Postives = 190/222 (85.59%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTN--SNPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQ++DSLTSHISLYH  SL  NP+ N  SN RSSIL+WFSSL+VHQRQAHLT VD K
Sbjct: 22  MAQNQVMDSLTSHISLYHCNSLSQNPNPNPNSNSRSSILRWFSSLTVHQRQAHLTTVDSK 81

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           F Q+LIQM+ ++R RGHGFFIILPD+ S DP  LP LC+K+SRGLLSRV++SNES+R +F
Sbjct: 82  FTQLLIQMLGKLRTRGHGFFIILPDLPSRDPPFLPGLCYKQSRGLLSRVAQSNESERRVF 141

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ES RLFGSREG+K+++C+CS+ ++DS+TV+EELV NVD+FVE MD VSNGAFLRG+  +L
Sbjct: 142 ESVRLFGSREGEKIDDCTCSVSSLDSMTVTEELVENVDRFVEIMDEVSNGAFLRGDESEL 201

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
            S W EL WLK+KGYYS+EAFV N+LEVALRL+W+N NNGK+
Sbjct: 202 VSDWIELEWLKSKGYYSVEAFVVNRLEVALRLAWLNCNNGKR 243

[Close]

BLAST of MELO3C005956 vs. TrEMBL
Match: A0A0D2S9U4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 155/222 (69.82%), Postives = 190/222 (85.59%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTN--SNPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQ++DSLTSHISLYH  SL  NP+ N  SN RSSIL+WFSSL+VHQRQAHLT VD K
Sbjct: 22  MAQNQVMDSLTSHISLYHCNSLSQNPNPNPNSNSRSSILRWFSSLTVHQRQAHLTTVDSK 81

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           F Q+LIQM+ ++R RGHGFFIILPD+ S DP  LP LC+K+SRGLLSRV++SNES+R +F
Sbjct: 82  FTQLLIQMLGKLRTRGHGFFIILPDLPSRDPPFLPGLCYKQSRGLLSRVAQSNESERRVF 141

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ES RLFGSREG+K+++C+CS+ ++DS+TV+EELV NVD+FVE MD VSNGAFLRG+  +L
Sbjct: 142 ESVRLFGSREGEKIDDCTCSVSSLDSMTVTEELVENVDRFVEIMDEVSNGAFLRGDESEL 201

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
            S W EL WLK+KGYYS+EAFV N+LEVALRL+W+N NNGK+
Sbjct: 202 VSDWIELEWLKSKGYYSVEAFVVNRLEVALRLAWLNCNNGKR 243

[Close]

BLAST of MELO3C005956 vs. TrEMBL
Match: A0A0D2SGS3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 155/222 (69.82%), Postives = 190/222 (85.59%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTN--SNPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQ++DSLTSHISLYH  SL  NP+ N  SN RSSIL+WFSSL+VHQRQAHLT VD K
Sbjct: 22  MAQNQVMDSLTSHISLYHCNSLSQNPNPNPNSNSRSSILRWFSSLTVHQRQAHLTTVDSK 81

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           F Q+LIQM+ ++R RGHGFFIILPD+ S DP  LP LC+K+SRGLLSRV++SNES+R +F
Sbjct: 82  FTQLLIQMLGKLRTRGHGFFIILPDLPSRDPPFLPGLCYKQSRGLLSRVAQSNESERRVF 141

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ES RLFGSREG+K+++C+CS+ ++DS+TV+EELV NVD+FVE MD VSNGAFLRG+  +L
Sbjct: 142 ESVRLFGSREGEKIDDCTCSVSSLDSMTVTEELVENVDRFVEIMDEVSNGAFLRGDESEL 201

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
            S W EL WLK+KGYYS+EAFV N+LEVALRL+W+N NNGK+
Sbjct: 202 VSDWIELEWLKSKGYYSVEAFVVNRLEVALRLAWLNCNNGKR 243

[Close]

BLAST of MELO3C005956 vs. TrEMBL
Match: A0A0D2TBS2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 155/222 (69.82%), Postives = 190/222 (85.59%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTN--SNPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQ++DSLTSHISLYH  SL  NP+ N  SN RSSIL+WFSSL+VHQRQAHLT VD K
Sbjct: 22  MAQNQVMDSLTSHISLYHCNSLSQNPNPNPNSNSRSSILRWFSSLTVHQRQAHLTTVDSK 81

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           F Q+LIQM+ ++R RGHGFFIILPD+ S DP  LP LC+K+SRGLLSRV++SNES+R +F
Sbjct: 82  FTQLLIQMLGKLRTRGHGFFIILPDLPSRDPPFLPGLCYKQSRGLLSRVAQSNESERRVF 141

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ES RLFGSREG+K+++C+CS+ ++DS+TV+EELV NVD+FVE MD VSNGAFLRG+  +L
Sbjct: 142 ESVRLFGSREGEKIDDCTCSVSSLDSMTVTEELVENVDRFVEIMDEVSNGAFLRGDESEL 201

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
            S W EL WLK+KGYYS+EAFV N+LEVALRL+W+N NNGK+
Sbjct: 202 VSDWIELEWLKSKGYYSVEAFVVNRLEVALRLAWLNCNNGKR 243

[Close]

BLAST of MELO3C005956 vs. TAIR10
Match: AT4G00060.1 (AT4G00060.1 Nucleotidyltransferase family protein)

HSP 1 Score: 298.9 bits (764), Expect = 2.6e-81
Identity = 148/221 (66.97%), Postives = 184/221 (83.26%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLN-PDTNSNPRSSILKWFSSLSVHQRQAHLTVVDFKF 60
           MAQNQLIDSLTSHISLYHS S   +  +T  NPRS+IL+WFSSLSVHQR +HLTVVD KF
Sbjct: 17  MAQNQLIDSLTSHISLYHSHSSSSSMANTIPNPRSAILRWFSSLSVHQRLSHLTVVDPKF 76

Query: 61  VQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIFE 120
           VQIL+QM+  +R +G   FIILPD+ S+  L  PSLCFKKSRGL+SRVSESNES+R +F+
Sbjct: 77  VQILLQMLGYIRTKGPCSFIILPDLPSSSDL--PSLCFKKSRGLISRVSESNESERFVFD 136

Query: 121 STRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDLA 180
           STRLFGS EG++ ++CSCS+ ++DS+ ++EE ++NVD+FVE MD +S+GAFLRGE  DL 
Sbjct: 137 STRLFGSGEGERAQDCSCSVNSLDSVVMAEEFLTNVDRFVETMDVLSDGAFLRGEESDLG 196

Query: 181 SHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
           S+W EL WLKAKGYYSMEAFVAN+LEV++RL+W+N N+GK+
Sbjct: 197 SNWVELEWLKAKGYYSMEAFVANRLEVSMRLAWLNTNSGKR 235

[Close]

BLAST of MELO3C005956 vs. NCBI nr
Match: gi|659074759|ref|XP_008437781.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103483113 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNPRSSILKWFSSLSVHQRQAHLTVVDFKFV 60
           MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNPRSSILKWFSSLSVHQRQAHLTVVDFKFV
Sbjct: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNPRSSILKWFSSLSVHQRQAHLTVVDFKFV 60

Query: 61  QILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIFES 120
           QILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIFES
Sbjct: 61  QILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIFES 120

Query: 121 TRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDLAS 180
           TRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDLAS
Sbjct: 121 TRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDLAS 180

Query: 181 HWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGK 220
           HWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGK
Sbjct: 181 HWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGK 219

[Close]

BLAST of MELO3C005956 vs. NCBI nr
Match: gi|778676628|ref|XP_011650624.1| (PREDICTED: uncharacterized protein LOC101221970 isoform X1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNS--NPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQLIDSLTSHISLYHSTSLPLNPDTNS  NPRSSILKWFSSLSVHQRQAHLTVVDFK
Sbjct: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNLNPRSSILKWFSSLSVHQRQAHLTVVDFK 60

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           FVQILIQMVAEVR+RGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVS+SNESQRMIF
Sbjct: 61  FVQILIQMVAEVRKRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSQSNESQRMIF 120

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ESTRLFGSREGDKLEECSCSLKNIDSITVSEE VSNVDKFVEAMDGVSNGAFLRGEGGDL
Sbjct: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEEFVSNVDKFVEAMDGVSNGAFLRGEGGDL 180

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
           AS+WAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK
Sbjct: 181 ASNWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 222

[Close]

BLAST of MELO3C005956 vs. NCBI nr
Match: gi|778676644|ref|XP_011650629.1| (PREDICTED: uncharacterized protein LOC101221970 isoform X3 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNS--NPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQLIDSLTSHISLYHSTSLPLNPDTNS  NPRSSILKWFSSLSVHQRQAHLTVVDFK
Sbjct: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNLNPRSSILKWFSSLSVHQRQAHLTVVDFK 60

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           FVQILIQMVAEVR+RGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVS+SNESQRMIF
Sbjct: 61  FVQILIQMVAEVRKRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSQSNESQRMIF 120

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ESTRLFGSREGDKLEECSCSLKNIDSITVSEE VSNVDKFVEAMDGVSNGAFLRGEGGDL
Sbjct: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEEFVSNVDKFVEAMDGVSNGAFLRGEGGDL 180

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
           AS+WAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK
Sbjct: 181 ASNWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 222

[Close]

BLAST of MELO3C005956 vs. NCBI nr
Match: gi|778676641|ref|XP_011650628.1| (PREDICTED: uncharacterized protein LOC101221970 isoform X2 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNS--NPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQLIDSLTSHISLYHSTSLPLNPDTNS  NPRSSILKWFSSLSVHQRQAHLTVVDFK
Sbjct: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTNSNLNPRSSILKWFSSLSVHQRQAHLTVVDFK 60

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           FVQILIQMVAEVR+RGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVS+SNESQRMIF
Sbjct: 61  FVQILIQMVAEVRKRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSQSNESQRMIF 120

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ESTRLFGSREGDKLEECSCSLKNIDSITVSEE VSNVDKFVEAMDGVSNGAFLRGEGGDL
Sbjct: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEEFVSNVDKFVEAMDGVSNGAFLRGEGGDL 180

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
           AS+WAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK
Sbjct: 181 ASNWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 222

[Close]

BLAST of MELO3C005956 vs. NCBI nr
Match: gi|763773933|gb|KJB41056.1| (hypothetical protein B456_007G088700 [Gossypium raimondii])

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 155/222 (69.82%), Postives = 190/222 (85.59%), Query Frame = 1


Query: 1   MAQNQLIDSLTSHISLYHSTSLPLNPDTN--SNPRSSILKWFSSLSVHQRQAHLTVVDFK 60
           MAQNQ++DSLTSHISLYH  SL  NP+ N  SN RSSIL+WFSSL+VHQRQAHLT VD K
Sbjct: 22  MAQNQVMDSLTSHISLYHCNSLSQNPNPNPNSNSRSSILRWFSSLTVHQRQAHLTTVDSK 81

Query: 61  FVQILIQMVAEVRRRGHGFFIILPDILSTDPLHLPSLCFKKSRGLLSRVSESNESQRMIF 120
           F Q+LIQM+ ++R RGHGFFIILPD+ S DP  LP LC+K+SRGLLSRV++SNES+R +F
Sbjct: 82  FTQLLIQMLGKLRTRGHGFFIILPDLPSRDPPFLPGLCYKQSRGLLSRVAQSNESERRVF 141

Query: 121 ESTRLFGSREGDKLEECSCSLKNIDSITVSEELVSNVDKFVEAMDGVSNGAFLRGEGGDL 180
           ES RLFGSREG+K+++C+CS+ ++DS+TV+EELV NVD+FVE MD VSNGAFLRG+  +L
Sbjct: 142 ESVRLFGSREGEKIDDCTCSVSSLDSMTVTEELVENVDRFVEIMDEVSNGAFLRGDESEL 201

Query: 181 ASHWAELNWLKAKGYYSMEAFVANKLEVALRLSWMNLNNGKK 221
            S W EL WLK+KGYYS+EAFV N+LEVALRL+W+N NNGK+
Sbjct: 202 VSDWIELEWLKSKGYYSVEAFVVNRLEVALRLAWLNCNNGKR 243

The following BLAST results are available for this feature:

BLAST of MELO3C005956 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8A8_CUCSA	9.6e-117	97.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116880 PE=4 SV=1	[more]
A0A0D2TBS7_GOSRA	1.1e-85	69.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1	[more]
A0A0D2S9U4_GOSRA	1.1e-85	69.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1	[more]
A0A0D2SGS3_GOSRA	1.1e-85	69.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1	[more]
A0A0D2TBS2_GOSRA	1.1e-85	69.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G088700 PE=4 SV=1	[more]

BLAST of MELO3C005956 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00060.1	2.6e-81	66.97	Nucleotidyltransferase family protein	[more]

BLAST of MELO3C005956 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074759\|ref\|XP_008437781.1\|	1.7e-119	100.00	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103483113 [Cucumis me...	[more]
gi\|778676628\|ref\|XP_011650624.1\|	1.4e-116	97.30	PREDICTED: uncharacterized protein LOC101221970 isoform X1 [Cucumis sativus]	[more]
gi\|778676644\|ref\|XP_011650629.1\|	1.4e-116	97.30	PREDICTED: uncharacterized protein LOC101221970 isoform X3 [Cucumis sativus]	[more]
gi\|778676641\|ref\|XP_011650628.1\|	1.4e-116	97.30	PREDICTED: uncharacterized protein LOC101221970 isoform X2 [Cucumis sativus]	[more]
gi\|763773933\|gb\|KJB41056.1\|	1.6e-85	69.82	hypothetical protein B456_007G088700 [Gossypium raimondii]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016779	nucleotidyltransferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU57859	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005956T1	MELO3C005956T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU57859	MU57859	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005956	Csa3G116880	Cucumber (Chinese Long) v2	cumeB236
MELO3C005956	Cla021087	Watermelon (97103) v1	mewmB461
MELO3C005956	Cla97C05G080150	Watermelon (97103) v2	mewmbB434
MELO3C005956	Bhi01G000440	Wax gourd	mewgoB540
MELO3C005956	CSPI03G07220	Wild cucumber (PI 183967)	cpimeB230
MELO3C005956	Cucsa.259890	Cucumber (Gy14) v1	cgymeB439
MELO3C005956	CmaCh14G021590	Cucurbita maxima (Rimu)	cmameB239
MELO3C005956	CmaCh06G009500	Cucurbita maxima (Rimu)	cmameB766
MELO3C005956	CmoCh06G009730	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005956	CmoCh14G022320	Cucurbita moschata (Rifu)	cmomeB230
MELO3C005956	Lsi05G022110	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C005956	Cp4.1LG08g00300	Cucurbita pepo (Zucchini)	cpemeB815
MELO3C005956	CsGy3G007370	Cucumber (Gy14) v2	cgybmeB200
MELO3C005956	Carg24182	Silver-seed gourd	carmeB0099
MELO3C005956	Carg17686	Silver-seed gourd	carmeB0138
MELO3C005956	CsaV3_3G007350	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005956	Silver-seed gourd	carmeB0137
MELO3C005956	Cucurbita maxima (Rimu)	cmameB242
MELO3C005956	Cucurbita moschata (Rifu)	cmomeB227
MELO3C005956	Watermelon (Charleston Gray)	mewcgB427
MELO3C005956	Cucurbita pepo (Zucchini)	cpemeB585