MELO3C005941 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005941
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEthylene-responsive transcription factor 13
Locationchr6 : 96227 .. 96904 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACAGAGAATACACAGTGTGGTAGTGTGGTTCCTTCTAATAACAATAAACCAAAGAAGAATTAGAAGCAGAAAAATCATGTTGAGCAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAATTAACTCCAAATTCAACTTATTCTACTCTTCCGTTCCATCACCCTTTTATTTCTCAACCTGGCCCTTCACAAATTATAATCTCCATTATTTTCTATCTCTACATATATATTAAGATCAGTCATCTCCAT

mRNA sequence

ATACAGAGAATACACAGTGTGGTAGTGTGGTTCCTTCTAATAACAATAAACCAAAGAAGAATTAGAAGCAGAAAAATCATGTTGAGCAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAATTAACTCCAAATTCAACTTATTCTACTCTTCCGTTCCATCACCCTTTTATTTCTCAACCTGGCCCTTCACAAATTATAATCTCCATTATTTTCTATCTCTACATATATATTAAGATCAGTCATCTCCAT

Coding sequence (CDS)

ATGTTGAGCAGCAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCTTTTGGAGCAGATTCGGCGGCATCTTCTAGAAGACGACTTAGGGAAAGGGAGTACCAATAATAATGTTGAGGATGGAATAATAAGGTATGATATTAGTTGTAGTGGAGCTGGTTGGGAGATGAGTAACAACAACAACAACAATATGGTGGATCAAATGTCGTCAATTATTATTAGAGACAATCCGGAAGAGAAGTCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGAGCTCGAATATGGCTGGGGACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCTAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTAA

Protein sequence

MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN*
Homology
[Close]
BLAST of MELO3C005941 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 56  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGA 115
           +GW  S     +  ++      + +     R +G+Q+RGVRRRPWGK+AAEIRDP + GA
Sbjct: 56  SGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGA 115

Query: 116 RIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 155
           R+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Sbjct: 116 RVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGS 154

[Close]
BLAST of MELO3C005941 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.3e-24
Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 57  GWEMSNNNNNNMVDQMSSIIIRDNPEEKSR------PRGLQFRGVRRRPWGKYAAEIRDP 116
           GW   N +   +  +     I  +P E +       PRG  +RGVRRRPWGK+AAEIRDP
Sbjct: 64  GWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDP 123

Query: 117 SRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 156
           ++ GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH I  N
Sbjct: 124 AKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLN 168

[Close]
BLAST of MELO3C005941 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.6e-24
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 1 

Query: 87  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 146
           P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 98  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 157

Query: 147 NFPHIISSN 156
           NFPH I  N
Sbjct: 158 NFPHRIGLN 166

[Close]
BLAST of MELO3C005941 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.6e-24
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 1 

Query: 87  PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 146
           P+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 94  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 153

Query: 147 NFPHIISSN 156
           NFPH I  N
Sbjct: 154 NFPHRIGLN 162

[Close]
BLAST of MELO3C005941 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 1 

Query: 57  GWEMSNNNNNNMVDQMSSIIIRDNPE------------EKSRP--------RGLQFRGVR 116
           GWE S+++++       S+ I + PE            EK+ P        +G  +RGVR
Sbjct: 94  GWEPSSSSSDEDRSSFPSVKI-ETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVR 153

Query: 117 RRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 155
           +RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  ++S
Sbjct: 154 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNS 210

[Close]
BLAST of MELO3C005941 vs. TrEMBL
Match: A0A0A0L893_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-74
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 1 

Query: 5   SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNN 64
           SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMSNNN
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 62

Query: 65  NNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTY 124
           NN MVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGKYAAEIRDPS+KGARIWLGTY
Sbjct: 63  NN-MVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTY 122

Query: 125 HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 123 HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 155

[Close]
BLAST of MELO3C005941 vs. TrEMBL
Match: M5WET5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb014367mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.0e-29
Identity = 74/150 (49.33%), Postives = 99/150 (66.00%), Query Frame = 1 

Query: 14  SSSDLFLLEQIRRHLLEDDLGKGSTN--NNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQ 73
           +SS+  LLE IR+HLL+DD    +T   +  ED    YD + S +    ++       D 
Sbjct: 7   TSSNWALLESIRQHLLDDDFENQATFLVSAAEDDAPLYDCAPSTSSSSHAHFGVEGWGDT 66

Query: 74  MSSIIIRDNPEEKSR-----PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQ 133
           ++ +    + + ++R     P G  FRGVRRRPWGKYAAEIRDP + GAR+WLGTY TA+
Sbjct: 67  IAILDHDLDVKVEARVNHAPPSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAE 126

Query: 134 DAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           DA LAYDRAAF+MRG+KAKLNFPH+I S++
Sbjct: 127 DAGLAYDRAAFKMRGSKAKLNFPHLIGSHD 156

[Close]
BLAST of MELO3C005941 vs. TrEMBL
Match: A0A061DUI1_THECC (Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao GN=TCM_005705 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 67/113 (59.29%), Postives = 82/113 (72.57%), Query Frame = 1 

Query: 54  SGAGWEMSNNNNNNM---VDQMSSIIIRDNPEEKSR--------PRGLQFRGVRRRPWGK 113
           + +GW  SN  +N     V+++ S   R+  +E+S+        P G+ F+GVRRRPWGK
Sbjct: 85  ANSGWSPSNEVDNYTPVAVEELVSTTTREIEKEESKVEPETSVPPSGMHFKGVRRRPWGK 144

Query: 114 YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 156
           YAAEIRDP R GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I SN
Sbjct: 145 YAAEIRDPKRNGARIWLGTYETPEDAALAYDRAAFKMRGAKAKLNFPHLIGSN 197

[Close]
BLAST of MELO3C005941 vs. TrEMBL
Match: A0A0D2QT87_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G070800 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.7e-28
Identity = 79/161 (49.07%), Postives = 98/161 (60.87%), Query Frame = 1 

Query: 14  SSSDLFLLEQIRRHLLEDDLGK--GSTNNNV------EDGI-----IRYDISCSGAGWEM 73
           S  DL LL+ IR++LLEDD     G    N+      ED I     I +D S   A   +
Sbjct: 7   SDFDLSLLDSIRQYLLEDDCDTIPGQVVENLPKTELHEDAINVDQWINFDQSFDAAEETV 66

Query: 74  SNNNNN------NMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKG 133
           + NN +      N   + ++ +    P+  + P+ + +RGVRRRPWG YAAEIRDP R G
Sbjct: 67  AVNNASFPSFEVNFQMETTAAV----PKSHAPPKEVNYRGVRRRPWGTYAAEIRDPKRNG 126

Query: 134 ARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 156
           ARIWLGTY T + AALAYDRAAF MRGAKAKLNFPH+I SN
Sbjct: 127 ARIWLGTYETPEGAALAYDRAAFNMRGAKAKLNFPHLIGSN 163

[Close]
BLAST of MELO3C005941 vs. TrEMBL
Match: A0A061DUP9_THECC (Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao GN=TCM_005706 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.7e-28
Identity = 72/151 (47.68%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 14  SSSDLFLLEQIRRHLLEDDL------GKGSTNNNVEDGIIRYDI---SCSGAGWEMSNNN 73
           S  DL LLE IR++LLED+L      G   T+    D  + +D    +   A   +S  +
Sbjct: 7   SGFDLSLLESIRQYLLEDELPLYDQIGCSKTDAINVDQWVTFDQLFDAAETAAVGVSVPS 66

Query: 74  NNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHT 133
              +  ++ +      P+ ++ P+ + +RGVRRRPWG YAAEIRDP + GAR+WLGTY T
Sbjct: 67  CEVITSELGTATTATAPKLQALPKKVHYRGVRRRPWGTYAAEIRDPKKNGARVWLGTYET 126

Query: 134 AQDAALAYDRAAFQMRGAKAKLNFPHIISSN 156
            +DAALAYDRAAF+MRGAKAKLNFPH+I S+
Sbjct: 127 PEDAALAYDRAAFKMRGAKAKLNFPHLIGSD 157

[Close]
BLAST of MELO3C005941 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 121.7 bits (304), Expect = 4.0e-28
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 56  AGWEMSNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGA 115
           +GW  S     +  ++      + +     R +G+Q+RGVRRRPWGK+AAEIRDP + GA
Sbjct: 56  SGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGA 115

Query: 116 RIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 155
           R+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S
Sbjct: 116 RVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGS 154

[Close]
BLAST of MELO3C005941 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-24
Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 1 

Query: 57  GWEMSNNNNNNMVDQMSSIIIRDNPE------------EKSRP--------RGLQFRGVR 116
           GWE S+++++       S+ I + PE            EK+ P        +G  +RGVR
Sbjct: 94  GWEPSSSSSDEDRSSFPSVKI-ETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVR 153

Query: 117 RRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 155
           +RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  ++S
Sbjct: 154 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNS 210

[Close]
BLAST of MELO3C005941 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1 

Query: 70  DQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAA 129
           DQ SS+ +    +EKS  R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AA
Sbjct: 52  DQSSSLTL----QEKSNSRQRNYRGVRQRPWGKWAAEIRDPN-KAARVWLGTFDTAEEAA 111

Query: 130 LAYDRAAFQMRGAKAKLNFPHIISSN 156
           LAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 112 LAYDKAAFEFRGHKAKLNFPEHIRVN 132

[Close]
BLAST of MELO3C005941 vs. TAIR10
Match: AT3G23220.1 (AT3G23220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 1 

Query: 90  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP 149
           +++RGVR+RPWGKYAAEIRD +R GAR+WLGT++TA+DAA AYDRAAF MRG +A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 150 H 151
           H
Sbjct: 72  H 72

[Close]
BLAST of MELO3C005941 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22
Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 81  PEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMR 140
           P  ++  +   +RGVR+RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYD AAF+MR
Sbjct: 106 PVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMR 165

Query: 141 GAKAKLNFPHIISS 155
           G++A LNFP  ++S
Sbjct: 166 GSRALLNFPLRVNS 179

[Close]
BLAST of MELO3C005941 vs. NCBI nr
Match: gi|659077725|ref|XP_008439350.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 3.1e-83
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEM 60
           MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEM
Sbjct: 1   MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEM 60

Query: 61  SNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG 120
           SNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG
Sbjct: 61  SNNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLG 120

Query: 121 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 121 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]
BLAST of MELO3C005941 vs. NCBI nr
Match: gi|449432982|ref|XP_004134277.1| (PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 1.6e-74
Identity = 147/154 (95.45%), Postives = 149/154 (96.75%), Query Frame = 1 

Query: 5   SSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEMSNNN 64
           SSSSSSLEGSSSDLF LEQIRRHLLEDDLGKGST+NNVEDGIIRYDIS SGAGWEMSNNN
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 62

Query: 65  NNNMVDQMSSIIIRDNPEEKS--RPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTY 124
           NN MVDQMSSIIIRDNPEEKS  RPRGLQFRGVRRRPWGKYAAEIRDPS+KGARIWLGTY
Sbjct: 63  NN-MVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTY 122

Query: 125 HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN
Sbjct: 123 HTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 155

[Close]
BLAST of MELO3C005941 vs. NCBI nr
Match: gi|595816489|ref|XP_007204071.1| (hypothetical protein PRUPE_ppb014367mg [Prunus persica])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 74/150 (49.33%), Postives = 99/150 (66.00%), Query Frame = 1 

Query: 14  SSSDLFLLEQIRRHLLEDDLGKGSTN--NNVEDGIIRYDISCSGAGWEMSNNNNNNMVDQ 73
           +SS+  LLE IR+HLL+DD    +T   +  ED    YD + S +    ++       D 
Sbjct: 7   TSSNWALLESIRQHLLDDDFENQATFLVSAAEDDAPLYDCAPSTSSSSHAHFGVEGWGDT 66

Query: 74  MSSIIIRDNPEEKSR-----PRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQ 133
           ++ +    + + ++R     P G  FRGVRRRPWGKYAAEIRDP + GAR+WLGTY TA+
Sbjct: 67  IAILDHDLDVKVEARVNHAPPSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAE 126

Query: 134 DAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           DA LAYDRAAF+MRG+KAKLNFPH+I S++
Sbjct: 127 DAGLAYDRAAFKMRGSKAKLNFPHLIGSHD 156

[Close]
BLAST of MELO3C005941 vs. NCBI nr
Match: gi|590723856|ref|XP_007052302.1| (Ethylene-responsive element binding factor 13, putative [Theobroma cacao])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 67/113 (59.29%), Postives = 82/113 (72.57%), Query Frame = 1 

Query: 54  SGAGWEMSNNNNNNM---VDQMSSIIIRDNPEEKSR--------PRGLQFRGVRRRPWGK 113
           + +GW  SN  +N     V+++ S   R+  +E+S+        P G+ F+GVRRRPWGK
Sbjct: 85  ANSGWSPSNEVDNYTPVAVEELVSTTTREIEKEESKVEPETSVPPSGMHFKGVRRRPWGK 144

Query: 114 YAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 156
           YAAEIRDP R GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I SN
Sbjct: 145 YAAEIRDPKRNGARIWLGTYETPEDAALAYDRAAFKMRGAKAKLNFPHLIGSN 197

[Close]
BLAST of MELO3C005941 vs. NCBI nr
Match: gi|645253276|ref|XP_008232503.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Prunus mume])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1 

Query: 14  SSSDLFLLEQIRRHLLEDDLGKGST--NNNVEDGIIRYDISCS----------GAGWEMS 73
           +SS+  LLE IR+HLL+DD    +T      ED    YD + S          G GW  +
Sbjct: 7   TSSNWALLESIRQHLLDDDFETQATFLAGVAEDDAPLYDCAPSTSSSSHAHFGGEGWGDT 66

Query: 74  NNNNNNMVDQMSSIIIRDNPEEKSRPRGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGT 133
               ++ +D+ + + +       +   G  FRGVRRRPWGKYAAEIRDP + GAR+WLGT
Sbjct: 67  IAILDHDLDRSNDVKVEARVNH-APSSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGT 126

Query: 134 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 157
           Y TA+DA+LAYDRAA++MRG+KAKLNFPH+I S++
Sbjct: 127 YETAEDASLAYDRAAYKMRGSKAKLNFPHLIGSHD 160

The following BLAST results are available for this feature:
BLAST of MELO3C005941 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF99_ARATH7.1e-2755.56Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=... [more]
ERF1_TOBAC4.3e-2451.43Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=... [more]
ERF2_NICSY5.6e-2469.57Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ... [more]
ERF2_TOBAC5.6e-2469.57Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=... [more]
EF100_ARATH4.8e-2348.31Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=... [more]
BLAST of MELO3C005941 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L893_CUCSA1.1e-7495.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1[more]
M5WET5_PRUPE9.0e-2949.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb014367mg PE=4 SV=1[more]
A0A061DUI1_THECC1.2e-2859.29Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao GN=TC... [more]
A0A0D2QT87_GOSRA7.7e-2849.07Uncharacterized protein OS=Gossypium raimondii GN=B456_004G070800 PE=4 SV=1[more]
A0A061DUP9_THECC7.7e-2847.68Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao GN=TC... [more]
BLAST of MELO3C005941 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44840.14.0e-2855.56 ethylene-responsive element binding factor 13[more]
AT4G17500.12.7e-2448.31 ethylene responsive element binding factor 1[more]
AT2G33710.23.9e-2361.63 Integrase-type DNA-binding superfamily protein[more]
AT3G23220.11.9e-2273.77 Integrase-type DNA-binding superfamily protein[more]
AT5G47220.13.3e-2260.81 ethylene responsive element binding factor 2[more]
BLAST of MELO3C005941 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077725|ref|XP_008439350.1|3.1e-83100.00PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo][more]
gi|449432982|ref|XP_004134277.1|1.6e-7495.45PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus][more]
gi|595816489|ref|XP_007204071.1|1.3e-2849.33hypothetical protein PRUPE_ppb014367mg [Prunus persica][more]
gi|590723856|ref|XP_007052302.1|1.7e-2859.29Ethylene-responsive element binding factor 13, putative [Theobroma cacao][more]
gi|645253276|ref|XP_008232503.1|2.9e-2847.74PREDICTED: ethylene-responsive transcription factor 13-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU57321melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005941T1MELO3C005941T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU57321MU57321transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 131..151
score: 5.4E-13coord: 92..103
score: 5.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 91..150
score: 7.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 92..141
score: 9.4
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 91..155
score: 7.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 91..149
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 92..150
score: 1.05
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 1..156
score: 1.2
NoneNo IPR availablePANTHERPTHR31190:SF21ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13coord: 1..156
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005941Bhi01G000454Wax gourdmewgoB540
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005941Cucumber (Gy14) v1cgymeB439
MELO3C005941Cucurbita maxima (Rimu)cmameB766
MELO3C005941Cucurbita moschata (Rifu)cmomeB755
MELO3C005941Wild cucumber (PI 183967)cpimeB230
MELO3C005941Cucumber (Chinese Long) v2cumeB236
MELO3C005941Watermelon (Charleston Gray)mewcgB427
MELO3C005941Watermelon (97103) v1mewmB461
MELO3C005941Cucurbita pepo (Zucchini)cpemeB815
MELO3C005941Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C005941Cucumber (Gy14) v2cgybmeB200
MELO3C005941Silver-seed gourdcarmeB0985
MELO3C005941Cucumber (Chinese Long) v3cucmeB236
MELO3C005941Watermelon (97103) v2mewmbB434