MELO3C005936.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCGTTCAACATTCCTGGCTTGGCTTCCTTCCAGCTCCCAGACTGCTTATAATTATTTTTGTTGAAACTGCAATCTTGCACAAAGCTTAGGAAGCCTTGTTGAGACTCAAGACGATAGTCGATTGATTCAACCGTATTGAATTGCAGGGAGGGATTTGGAATTCGCAGAGACTGAGTACAATTCCTCGGAAAAATGTCCGCTCGGCTGCTCAAAAAGGTTTTAAAGGAACAGGAGGAGCTTCGACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATTCTGGTTCTGGGCCATCGTCACCTACTGCTTCTTCTATCAATCCCTTCGACCTCCTTATCGATGAAGAAGATGACTCCCAAATTGACCCTCACCAGGTTTCTTATTTCATTCCCCTCTTCAACTTTGCTGAATTCTCAACTTTTCACATGCCTGCACTCTAATTATTTGGGAGACTGGAGCCTTCTCAATTTCTATAAATTTTAAGCATATTTACACAACTGTGAAAGTTGATACTTCAATGGTTCCTTCCGCAACTATGTGCACCCGATTATAAACGCACGAATTGTTGTTTGATTTTGCAGTATACTAATTATATATTTGGTTTTCCATATATATTCCGAAGCTTATGTCTTTCCGGAAGTAGGCTGTCGAAATGTTTCTTTTTTTCGAATTAAAACACATTTGTAATTTAGACAGCTGTAAACTTATTCCGACAGTAAACATTAGAATTTAGAAATATGACGAACAGTTTTTAAAAACCTATTGATCTTTTTTGTTTTTTTAGAAGCACCCATTCATTGAAAATGATGAGTTGGCTTGCGTTCATCTTTTGTGTTGAATATACCGAATGATGAAGAATTAAAAACCCGGAATTTGAAAGGCATTCTTCTAAACAAACTTTTAAACAACTTATCTTCTTTTTTCTTGGGTCAAACTATATTTTATACTGTTTTTTGTCCACCAGTTTCACCTTTGGCCAATTTATGCCACAATTCTTAACCATTTTTTAAGCCAGAGGTGGTTGACTTGAGCTTAATATTAGTACATAACTACTAGTTCTACTTTGTGTGTGTGCGTGCACACAACATGCGGGGGGACGGAGAACTTACAAAGACAAAAAACGCAACTTTTTGTTATTGAAATAAAGGACAATTGCATTGCATCACAAATTTAAGTCAAGAACAAGGAAAGCATTGAACTGCACAAAATTTGGGACCCTTCTAATAGGTACATGAGTTGATTTATTATTTTTCCTTCAACTTTTGTCATCATTTCTTGCTAGACAATGGACTCGTTTTGAATTTGGGGTATGAATTTAAGTTAATTTATTATTATTCTTCAACCTTTTGTCATCAAAAGCTTCTCGAACGAAGTCTCCTTTGAAGCCTGTCAGTGCGTGTTGTAGTTTTGGGCATTGTTTCCTCTTTCTTCACTTTCAATGGGTTTTTGGTTTCTCGTTGAAGGTTAACTGTTCCCATTTGGTTGGGCTCTTCAGAAGTTTTTCTCTCAATTGTTTTGTGTTTGTTTACATTGAGGAGTTTTGCTTTGCATTTCTGAAACAAATTTCTTGATTTGTCCTCATAAAATTTTTCATTCTCAATAATACGAAATAAATAAAATAATGATACCATTGTAACATAATAATCTCCCTTAGTTTAGCCGTTCCCTTGTTTTCTTTGTTTTCAACTTTTTTGCCCAACAGGCTGTCATTTGTCAACAGGACAATGACCGGGAGGCGGTTGAGGAAATCTCCGTGGACAGTCGCAAGCAGTTTGTGCGCAATGGAGCTAAAAGTGCTATTTCAACATCAAATAAAAAATTGAAAAAAAAGAAAAAGAAGAAGGAGCGTGAGAGTTTTTCTTCCACAACAGATAGAATCCTTGACAAACCCTTGGATGTGCTTCTCAAATCTCTGTCTCTGGATATTGATCCCTCTGCTATAAGCAGTCCACAGGGCCCTGAGAAAGCCAAAAATGGTGCAGAAGAAAGTGGAAAACAATGTATGCCGTCACTATTAGAAGTGGAGCCTAAATATTTAAATGCCGGAAATGAACTGCGAAGAATATTTGGTGCTAAGGTAGTAAAATCATTTGAAAAAAATAACCAGGCCAGTAGTTCTAGACAACTACGTGGGGGAAGACGTGTCAACCATCTTTCTAGGAAGACCTATCTTGTAAGTCCATCAGATCATTGGCCTCGTTGGGATGGTTCTCTTTCCATGGAGTATTTGGAGTCGAGGAATGGATATCACTACTTCAGGTAAATTTCATTTTCATTTATAGTTTCTTTTTTACCCCTTGCTCCCTAAAGCATTTACTGAATTTAAGTAGAATTAAACTAGCATCGGATTACTGTATATGTGTGTCCAGCCTGCTAGGTTTTGACGAATGATTTGTCCAGCAAGGCTACTACATGTATTACCTGAATATTAAATTGAACTTCTAAGTAACTGTATAAAGCTCGTCTTTCTTGGTTGAAGATTTAATAAGTTGAATGAACTGCAATTTTATGAATCTATTATCGTCTTTTTTTGTCAATTTTCATTTATAATATGCAAGGACTCCCTTTGTGGAGACACACAAACTTTACTAATAATGATAATCAAAATACAAGATAATCTCCTTTTGAGAGGGAGGAACTCTCCAGGATACAACTTAATACATAATACTAGCATAACCCCAAAACAGGATCACGAAACTATATATAACAGCCAAGCAACCTGACCTACTAACTTAACCTTGGTTAGGTGAATTCTCCATTCTACCCCTCCTAGCATACGTGTACACAATTTGGGGCATAACATAATGTTTGTATATGTAGATAATTGTGCCTCCCATCTCTCTCTCCCTCCCCCCCCCCCCCCCAAGATAGAAAGAAAAAACATTTTCCCTTTTGGGGTTTAATTAAATAACATAACGTTTAATTACATTCCTCGTGTTCAATAAATGTCGATCATATTTTCTTTTTCCCTTTATTTTTCTGAATTATTTCCAATTGTGTTTTGACCCTCGTGTTTCATCTTTTTGTACGTTTCTTATTAGCTTTTCTATAAGTTAGTGTCAGCCGTTAAAATATGTTAATCTAAATGTAGTGTTTTGATTGTAATGTAATGAATTCCAGATATGTACACCTGCCATCCTATGTGAAGCTCAGAAAGCATTTGAAGCCGCCAGATCTATTCATGACCTCAATGGCATTGCCAGTATTCTGTTGTACCACCCATATCACTTAGACTCACTTATAACGATGGCAGAGTATTTTAAATTTGCAGGTGACCACGAAATGTCCTCTGATGCAGTTGCAAAGAGTTTATATGCCTTGGAATGTGCATGGCACCCCATGTTTACTGTCTTTCAGGGTAATTGCCAATTGAAGATCAGGCATGAAACGAACAAGCCAATGTTTACATCACTTTTCACCCATGTAAAAAACTTGGATAGGCGTGGTTGTCATCGATCTGCCTTGGAAGTTTGCAAACTGTTACTTTCACTGGATTCTGATGACCCAATGGGGGCTCTTTTCTTCATTGATTACCTATCTTTGAGGGCAGAGGAATACACATGGCTGGAAAGGTTTTGTGAGAGCTACAAAAATGATACTTCTCTGTGGTTGTTCCCAAACTTCTCGTTTTCCCTTTCTATATGTCGATTTTTTCTTGAGCGTGAGGAACCCTCAAAGGTCGATAATGTGGATGCTACGAGGGCTAATTCAACTGATCTTCTGAAGCAGGCGTTAATGCTTCACCCTTTGGTCTTAAAGAGATTAGTGGAAAAGGTCCCACTTAAGGAGCAGTTTTGGGTGCATATACTCGAGCATTCCTTCTTCCTGCCTGCTCAGACAGGAATCCCATCATTGGATCACCTCATTAATTTGTACGTCGAGAGGAATTACATTATATGGAGAATCCCGTATCTGCAGAAGTTTCTCAGAGAGACTGCGCAATTGGTTATTGAAGCGTTGGAAACTGATCAAAACGATGCAAAAGACTGGACTTGTGTGAGAAAAGAAGCATTCTCATCTGAGAAAAATGAGTAAGCATCTCTCTCTCTCGGCACATCATTCGGGCACTGGTCAACACATGCATTTTGATCAGTTGAGCTCTGAAATTATTTTTTAACTAAATAAGTAATAGCCACTAAGATTTTAATCGTCTATGAATTTTCCATTGTACTTGTGGAATCTAATGATTATTAATGCAATTTTTGTGAGGTAAAAGTGCTTCTTTGAATGCCAGGTATGCTCATTTATTGGTCTCTGATTTCTCTGATTCACTATCATCGGCCCCCCCTGAAGCATTGCAAGATTTTGTGGTTGATCCAAGGATGAGGGACGTGCAGAATATAATTCAACATGCCAATCCTCCCGATCACCGGCAACCTACTCATGAAATTGAAAATAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTACCTTGGGTTAACTATGGAGATGATGTAGGTGTTGATGAAGGTAACCAGTTCGATGAGCATGATGACCATTGAGTTGTCAATTCTTCTCGAGTCGCTGGTTCTCTTCAAAATGCTTTGAGAATGGACTTAATGTGATGGCATAGATCACGTATTCGTCTGTTGCCTTTGTAGCATTTGCATCCAGTTTTGTTTACTGCTATCTGTCGTTGGTTGCCACCCGATAATGATTGGCACTGGTAGTTGTACTTGTATGTAGGAAGTTTTTGAATTCCCAACGCATTCTCTGTCTTTCTCAAGCAAAGATGATCAATTCCCAAAATTGGAGGGAAATGTTTTCTCACTGGTTGGGGTGTCTATAGATTAATAAAAAGGCGTATGTTGTGGA GTTCGTTCAACATTCCTGGCTTGGCTTCCTTCCAGCTCCCAGACTGCTTATAATTATTTTTGTTGAAACTGCAATCTTGCACAAAGCTTAGGAAGCCTTGTTGAGACTCAAGACGATAGTCGATTGATTCAACCGTATTGAATTGCAGGGAGGGATTTGGAATTCGCAGAGACTGAGTACAATTCCTCGGAAAAATGTCCGCTCGGCTGCTCAAAAAGGTTTTAAAGGAACAGGAGGAGCTTCGACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATTCTGGTTCTGGGCCATCGTCACCTACTGCTTCTTCTATCAATCCCTTCGACCTCCTTATCGATGAAGAAGATGACTCCCAAATTGACCCTCACCAGGCTGTCATTTGTCAACAGGACAATGACCGGGAGGCGGTTGAGGAAATCTCCGTGGACAGTCGCAAGCAGTTTGTGCGCAATGGAGCTAAAAGTGCTATTTCAACATCAAATAAAAAATTGAAAAAAAAGAAAAAGAAGAAGGAGCGTGAGAGTTTTTCTTCCACAACAGATAGAATCCTTGACAAACCCTTGGATGTGCTTCTCAAATCTCTGTCTCTGGATATTGATCCCTCTGCTATAAGCAGTCCACAGGGCCCTGAGAAAGCCAAAAATGGTGCAGAAGAAAGTGGAAAACAATGTATGCCGTCACTATTAGAAGTGGAGCCTAAATATTTAAATGCCGGAAATGAACTGCGAAGAATATTTGGTGCTAAGGTAGTAAAATCATTTGAAAAAAATAACCAGGCCAGTAGTTCTAGACAACTACGTGGGGGAAGACGTGTCAACCATCTTTCTAGGAAGACCTATCTTGTAAGTCCATCAGATCATTGGCCTCGTTGGGATGGTTCTCTTTCCATGGAGTATTTGGAGTCGAGGAATGGATATCACTACTTCAGATATGTACACCTGCCATCCTATGTGAAGCTCAGAAAGCATTTGAAGCCGCCAGATCTATTCATGACCTCAATGGCATTGCCAGTATTCTGTTGTACCACCCATATCACTTAGACTCACTTATAACGATGGCAGAGTATTTTAAATTTGCAGGTGACCACGAAATGTCCTCTGATGCAGTTGCAAAGAGTTTATATGCCTTGGAATGTGCATGGCACCCCATGTTTACTGTCTTTCAGGGTAATTGCCAATTGAAGATCAGGCATGAAACGAACAAGCCAATGTTTACATCACTTTTCACCCATGTAAAAAACTTGGATAGGCGTGGTTGTCATCGATCTGCCTTGGAAGTTTGCAAACTGTTACTTTCACTGGATTCTGATGACCCAATGGGGGCTCTTTTCTTCATTGATTACCTATCTTTGAGGGCAGAGGAATACACATGGCTGGAAAGGTTTTGTGAGAGCTACAAAAATGATACTTCTCTGTGGTTGTTCCCAAACTTCTCGTTTTCCCTTTCTATATGTCGATTTTTTCTTGAGCGTGAGGAACCCTCAAAGGTCGATAATGTGGATGCTACGAGGGCTAATTCAACTGATCTTCTGAAGCAGGCGTTAATGCTTCACCCTTTGGTCTTAAAGAGATTAGTGGAAAAGGTCCCACTTAAGGAGCAGTTTTGGGTGCATATACTCGAGCATTCCTTCTTCCTGCCTGCTCAGACAGGAATCCCATCATTGGATCACCTCATTAATTTGTACGTCGAGAGGAATTACATTATATGGAGAATCCCGTATCTGCAGAAGTTTCTCAGAGAGACTGCGCAATTGGTTATTGAAGCGTTGGAAACTGATCAAAACGATGCAAAAGACTGGACTTGTGTGAGAAAAGAAGCATTCTCATCTGAGAAAAATGAGTATGCTCATTTATTGGTCTCTGATTTCTCTGATTCACTATCATCGGCCCCCCCTGAAGCATTGCAAGATTTTGTGGTTGATCCAAGGATGAGGGACGTGCAGAATATAATTCAACATGCCAATCCTCCCGATCACCGGCAACCTACTCATGAAATTGAAAATAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTACCTTGGGTTAACTATGGAGATGATGTAGGTGTTGATGAAGGTAACCAGTTCGATGAGCATGATGACCATTGAGTTGTCAATTCTTCTCGAGTCGCTGGTTCTCTTCAAAATGCTTTGAGAATGGACTTAATGTGATGGCATAGATCACGTATTCGTCTGTTGCCTTTGTAGCATTTGCATCCAGTTTTGTTTACTGCTATCTGTCGTTGGTTGCCACCCGATAATGATTGGCACTGGTAGTTGTACTTGTATGTAGGAAGTTTTTGAATTCCCAACGCATTCTCTGTCTTTCTCAAGCAAAGATGATCAATTCCCAAAATTGGAGGGAAATGTTTTCTCACTGGTTGGGGTGTCTATAGATTAATAAAAAGGCGTATGTTGTGGA ATGGCAGAGTATTTTAAATTTGCAGGTGACCACGAAATGTCCTCTGATGCAGTTGCAAAGAGTTTATATGCCTTGGAATGTGCATGGCACCCCATGTTTACTGTCTTTCAGGGTAATTGCCAATTGAAGATCAGGCATGAAACGAACAAGCCAATGTTTACATCACTTTTCACCCATGTAAAAAACTTGGATAGGCGTGGTTGTCATCGATCTGCCTTGGAAGTTTGCAAACTGTTACTTTCACTGGATTCTGATGACCCAATGGGGGCTCTTTTCTTCATTGATTACCTATCTTTGAGGGCAGAGGAATACACATGGCTGGAAAGGTTTTGTGAGAGCTACAAAAATGATACTTCTCTGTGGTTGTTCCCAAACTTCTCGTTTTCCCTTTCTATATGTCGATTTTTTCTTGAGCGTGAGGAACCCTCAAAGGTCGATAATGTGGATGCTACGAGGGCTAATTCAACTGATCTTCTGAAGCAGGCGTTAATGCTTCACCCTTTGGTCTTAAAGAGATTAGTGGAAAAGGTCCCACTTAAGGAGCAGTTTTGGGTGCATATACTCGAGCATTCCTTCTTCCTGCCTGCTCAGACAGGAATCCCATCATTGGATCACCTCATTAATTTGTACGTCGAGAGGAATTACATTATATGGAGAATCCCGTATCTGCAGAAGTTTCTCAGAGAGACTGCGCAATTGGTTATTGAAGCGTTGGAAACTGATCAAAACGATGCAAAAGACTGGACTTGTGTGAGAAAAGAAGCATTCTCATCTGAGAAAAATGAGTATGCTCATTTATTGGTCTCTGATTTCTCTGATTCACTATCATCGGCCCCCCCTGAAGCATTGCAAGATTTTGTGGTTGATCCAAGGATGAGGGACGTGCAGAATATAATTCAACATGCCAATCCTCCCGATCACCGGCAACCTACTCATGAAATTGAAAATAGGAGTGCATTGGCTGTCCTGTTTGAATCAATGCTACCTTGGGTTAACTATGGAGATGATGTAGGTGTTGATGAAGGTAACCAGTTCGATGAGCATGATGACCATTGA MAEYFKFAGDHEMSSDAVAKSLYALECAWHPMFTVFQGNCQLKIRHETNKPMFTSLFTHVKNLDRRGCHRSALEVCKLLLSLDSDDPMGALFFIDYLSLRAEEYTWLERFCESYKNDTSLWLFPNFSFSLSICRFFLEREEPSKVDNVDATRANSTDLLKQALMLHPLVLKRLVEKVPLKEQFWVHILEHSFFLPAQTGIPSLDHLINLYVERNYIIWRIPYLQKFLRETAQLVIEALETDQNDAKDWTCVRKEAFSSEKNEYAHLLVSDFSDSLSSAPPEALQDFVVDPRMRDVQNIIQHANPPDHRQPTHEIENRSALAVLFESMLPWVNYGDDVGVDEGNQFDEHDDH
BLAST of MELO3C005936.2 vs. NCBI nr
Match: XP_008437758.1 (PREDICTED: LOW QUALITY PROTEIN: transcription factor 25 [Cucumis melo]) HSP 1 Score: 721.8 bits (1862), Expect = 1.1e-204 Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0
BLAST of MELO3C005936.2 vs. NCBI nr
Match: XP_004133757.1 (PREDICTED: transcription factor 25 [Cucumis sativus]) HSP 1 Score: 705.7 bits (1820), Expect = 8.0e-200 Identity = 344/353 (97.45%), Postives = 348/353 (98.58%), Query Frame = 0
BLAST of MELO3C005936.2 vs. NCBI nr
Match: XP_022146905.1 (transcription factor 25 [Momordica charantia]) HSP 1 Score: 654.4 bits (1687), Expect = 2.1e-184 Identity = 318/351 (90.60%), Postives = 331/351 (94.30%), Query Frame = 0
BLAST of MELO3C005936.2 vs. NCBI nr
Match: XP_022935196.1 (transcription factor 25 [Cucurbita moschata]) HSP 1 Score: 654.4 bits (1687), Expect = 2.1e-184 Identity = 319/351 (90.88%), Postives = 331/351 (94.30%), Query Frame = 0
BLAST of MELO3C005936.2 vs. NCBI nr
Match: XP_022974270.1 (transcription factor 25 [Cucurbita maxima]) HSP 1 Score: 652.9 bits (1683), Expect = 6.2e-184 Identity = 318/351 (90.60%), Postives = 331/351 (94.30%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TAIR10
Match: AT2G46900.1 (Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994)) HSP 1 Score: 421.0 bits (1081), Expect = 7.2e-118 Identity = 205/357 (57.42%), Postives = 263/357 (73.67%), Query Frame = 0
BLAST of MELO3C005936.2 vs. Swiss-Prot
Match: sp|Q9BQ70|TCF25_HUMAN (Transcription factor 25 OS=Homo sapiens OX=9606 GN=TCF25 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 6.1e-42 Identity = 99/333 (29.73%), Postives = 182/333 (54.65%), Query Frame = 0
BLAST of MELO3C005936.2 vs. Swiss-Prot
Match: sp|Q8R3L2|TCF25_MOUSE (Transcription factor 25 OS=Mus musculus OX=10090 GN=Tcf25 PE=1 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 3.0e-41 Identity = 101/353 (28.61%), Postives = 193/353 (54.67%), Query Frame = 0
BLAST of MELO3C005936.2 vs. Swiss-Prot
Match: sp|Q8T2A4|TCF25_DICDI (Transcription factor 25 homolog OS=Dictyostelium discoideum OX=44689 GN=tcf25 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.7e-32 Identity = 86/296 (29.05%), Postives = 148/296 (50.00%), Query Frame = 0
BLAST of MELO3C005936.2 vs. Swiss-Prot
Match: sp|O13796|RCQ1_SCHPO (Ribosome quality control complex subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqc1 PE=1 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 1.8e-17 Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TrEMBL
Match: tr|A0A1S3AUW3|A0A1S3AUW3_CUCME (LOW QUALITY PROTEIN: transcription factor 25 OS=Cucumis melo OX=3656 GN=LOC103483095 PE=4 SV=1) HSP 1 Score: 721.8 bits (1862), Expect = 7.2e-205 Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TrEMBL
Match: tr|A0A0A0L889|A0A0A0L889_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116680 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 2.3e-179 Identity = 318/353 (90.08%), Postives = 321/353 (90.93%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TrEMBL
Match: tr|A0A2P4KHM5|A0A2P4KHM5_QUESU (Transcription factor 25 OS=Quercus suber OX=58331 GN=CFP56_63198 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.1e-144 Identity = 245/345 (71.01%), Postives = 294/345 (85.22%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TrEMBL
Match: tr|B9GRU0|B9GRU0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G183500v3 PE=4 SV=2) HSP 1 Score: 504.2 bits (1297), Expect = 2.3e-139 Identity = 246/352 (69.89%), Postives = 287/352 (81.53%), Query Frame = 0
BLAST of MELO3C005936.2 vs. TrEMBL
Match: tr|A0A2K2BKR9|A0A2K2BKR9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G183500v3 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 2.3e-139 Identity = 246/352 (69.89%), Postives = 287/352 (81.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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