MELO3C005863 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005863
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHAT transposon superfamily isoform 1
Locationchr9 : 23698478 .. 23698723 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCAGAGTGGGTAGAGGAGAGTGAAAACCAAAGCCCGACGCAATGGCTCGACAGATTTGGTTCTTCCTTGGATGGGGGCGACTTGAATACAAGACAGTTCAATGCTGCCATGTTTGGTGCAAGTGACCACATATTTAATTTGTGAGAAACATCTTAACTTGCAACATCAAATTGTTTGTTTGTAATCCTCTCCACTTCTTATTAGGCCTTGTATGTATTCTCTGATTAGAGGCTTCATCTC

mRNA sequence

ATGACGTCAGAGTGGGTAGAGGAGAGTGAAAACCAAAGCCCGACGCAATGGCTCGACAGATTTGGTTCTTCCTTGGATGGGGGCGACTTGAATACAAGACAGTTCAATGCTGCCATGTTTGGTGCAAGTGACCACATATTTAATTTGTGAGAAACATCTTAACTTGCAACATCAAATTGTTTGTTTGTAATCCTCTCCACTTCTTATTAGGCCTTGTATGTATTCTCTGATTAGAGGCTTCATCTC

Coding sequence (CDS)

ATGACGTCAGAGTGGGTAGAGGAGAGTGAAAACCAAAGCCCGACGCAATGGCTCGACAGATTTGGTTCTTCCTTGGATGGGGGCGACTTGAATACAAGACAGTTCAATGCTGCCATGTTTGGTGCAAGTGACCACATATTTAATTTGTGA

Protein sequence

MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL*
Homology
[Close]
BLAST of MELO3C005863 vs. TrEMBL
Match: A0A0A0KQ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139690 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-19
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESENQSPTQWLDRFGSSLDG DLNTRQFNAAMFGA+DHIFNL
Sbjct: 576 MTSEWVEESENQSPTQWLDRFGSSLDGSDLNTRQFNAAMFGANDHIFNL 624

[Close]
BLAST of MELO3C005863 vs. TrEMBL
Match: A0A067JRN9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26015 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-17
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEES+N SPTQWLDRFGS+LDG DLNTRQFNAA+FGASDHIF L
Sbjct: 366 MTSEWVEESDNASPTQWLDRFGSALDGSDLNTRQFNAAIFGASDHIFGL 414

[Close]
BLAST of MELO3C005863 vs. TrEMBL
Match: M5X3I3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002763mg PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-16
Identity = 41/49 (83.67%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEES+N SPTQWLDRFGS+LDG DLNTRQFNAA+FG++DHIF L
Sbjct: 588 MTSEWVEESDNPSPTQWLDRFGSALDGSDLNTRQFNAAIFGSNDHIFGL 636

[Close]
BLAST of MELO3C005863 vs. TrEMBL
Match: A0A061G1G7_THECC (HAT transposon superfamily isoform 1 OS=Theobroma cacao GN=TCM_015328 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-16
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESEN SPTQWLDRFGS+LDGGDLNTRQFNAA+FG +DHIF L
Sbjct: 593 MTSEWVEESENPSPTQWLDRFGSALDGGDLNTRQFNAAIFG-NDHIFGL 640

[Close]
BLAST of MELO3C005863 vs. TrEMBL
Match: A0A061G8Q6_THECC (HAT transposon superfamily isoform 4 OS=Theobroma cacao GN=TCM_015328 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-16
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESEN SPTQWLDRFGS+LDGGDLNTRQFNAA+FG +DHIF L
Sbjct: 635 MTSEWVEESENPSPTQWLDRFGSALDGGDLNTRQFNAAIFG-NDHIFGL 682

[Close]
BLAST of MELO3C005863 vs. TAIR10
Match: AT1G79740.1 (AT1G79740.1 hAT transposon superfamily)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-16
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDH-IFNL 50
           M SEWVEE+EN SP QWLDRFG++LDGGDLNTRQF  A+F A+DH IF L
Sbjct: 602 MMSEWVEEAENPSPAQWLDRFGTALDGGDLNTRQFGGAIFSANDHNIFGL 651

[Close]
BLAST of MELO3C005863 vs. NCBI nr
Match: gi|659074366|ref|XP_008437565.1| (PREDICTED: uncharacterized protein LOC103482941 isoform X1 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-20
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL
Sbjct: 633 MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 681

[Close]
BLAST of MELO3C005863 vs. NCBI nr
Match: gi|659074372|ref|XP_008437568.1| (PREDICTED: uncharacterized protein LOC103482941 isoform X2 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-20
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL
Sbjct: 576 MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 624

[Close]
BLAST of MELO3C005863 vs. NCBI nr
Match: gi|778698960|ref|XP_004145979.2| (PREDICTED: uncharacterized protein LOC101215128 isoform X1 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-19
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESENQSPTQWLDRFGSSLDG DLNTRQFNAAMFGA+DHIFNL
Sbjct: 633 MTSEWVEESENQSPTQWLDRFGSSLDGSDLNTRQFNAAMFGANDHIFNL 681

[Close]
BLAST of MELO3C005863 vs. NCBI nr
Match: gi|778698963|ref|XP_011654630.1| (PREDICTED: uncharacterized protein LOC101215128 isoform X2 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-19
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEESENQSPTQWLDRFGSSLDG DLNTRQFNAAMFGA+DHIFNL
Sbjct: 576 MTSEWVEESENQSPTQWLDRFGSSLDGSDLNTRQFNAAMFGANDHIFNL 624

[Close]
BLAST of MELO3C005863 vs. NCBI nr
Match: gi|643706052|gb|KDP22184.1| (hypothetical protein JCGZ_26015 [Jatropha curcas])

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-17
Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = 1 

Query: 1   MTSEWVEESENQSPTQWLDRFGSSLDGGDLNTRQFNAAMFGASDHIFNL 50
           MTSEWVEES+N SPTQWLDRFGS+LDG DLNTRQFNAA+FGASDHIF L
Sbjct: 366 MTSEWVEESDNASPTQWLDRFGSALDGSDLNTRQFNAAIFGASDHIFGL 414

The following BLAST results are available for this feature:
BLAST of MELO3C005863 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ93_CUCSA1.6e-1995.92Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139690 PE=4 SV=1[more]
A0A067JRN9_JATCU2.5e-1787.76Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26015 PE=4 SV=1[more]
M5X3I3_PRUPE1.3e-1683.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002763mg PE=4 SV=1[more]
A0A061G1G7_THECC3.7e-1687.76HAT transposon superfamily isoform 1 OS=Theobroma cacao GN=TCM_015328 PE=4 SV=1[more]
A0A061G8Q6_THECC3.7e-1687.76HAT transposon superfamily isoform 4 OS=Theobroma cacao GN=TCM_015328 PE=4 SV=1[more]
BLAST of MELO3C005863 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79740.14.3e-1674.00 hAT transposon superfamily[more]
BLAST of MELO3C005863 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074366|ref|XP_008437565.1|2.1e-20100.00PREDICTED: uncharacterized protein LOC103482941 isoform X1 [Cucumis melo][more]
gi|659074372|ref|XP_008437568.1|2.1e-20100.00PREDICTED: uncharacterized protein LOC103482941 isoform X2 [Cucumis melo][more]
gi|778698960|ref|XP_004145979.2|2.3e-1995.92PREDICTED: uncharacterized protein LOC101215128 isoform X1 [Cucumis sativus][more]
gi|778698963|ref|XP_011654630.1|2.3e-1995.92PREDICTED: uncharacterized protein LOC101215128 isoform X2 [Cucumis sativus][more]
gi|643706052|gb|KDP22184.1|3.6e-1787.76hypothetical protein JCGZ_26015 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016459 myosin complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003774 motor activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55547melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005863T1MELO3C005863T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55547MU55547transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32166FAMILY NOT NAMEDcoord: 1..49
score: 6.5
NoneNo IPR availablePANTHERPTHR32166:SF17HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEINcoord: 1..49
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005863Csa5G139690Cucumber (Chinese Long) v2cumeB357
MELO3C005863ClCG01G000670Watermelon (Charleston Gray)mewcgB018
MELO3C005863Cla97C01G000730Watermelon (97103) v2mewmbB008
MELO3C005863Bhi12G000533Wax gourdmewgoB004
MELO3C005863CSPI05G03420Wild cucumber (PI 183967)cpimeB348
MELO3C005863CmaCh15G010440Cucurbita maxima (Rimu)cmameB257
MELO3C005863CmoCh15G011040Cucurbita moschata (Rifu)cmomeB246
MELO3C005863Lsi09G000480Bottle gourd (USVL1VR-Ls)lsimeB012
MELO3C005863Cp4.1LG13g03050Cucurbita pepo (Zucchini)cpemeB148
MELO3C005863CsGy5G000660Cucumber (Gy14) v2cgybmeB298
MELO3C005863Carg26223Silver-seed gourdcarmeB0302
MELO3C005863CsaV3_5G000770Cucumber (Chinese Long) v3cucmeB357
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005863Cucumber (Gy14) v1cgymeB138
MELO3C005863Cucumber (Gy14) v1cgymeB367
MELO3C005863Cucumber (Gy14) v1cgymeB426
MELO3C005863Cucurbita maxima (Rimu)cmameB283
MELO3C005863Cucurbita maxima (Rimu)cmameB349
MELO3C005863Cucurbita maxima (Rimu)cmameB527
MELO3C005863Cucurbita moschata (Rifu)cmomeB198
MELO3C005863Cucurbita moschata (Rifu)cmomeB275
MELO3C005863Cucurbita moschata (Rifu)cmomeB341
MELO3C005863Cucurbita moschata (Rifu)cmomeB515
MELO3C005863Wild cucumber (PI 183967)cpimeB166
MELO3C005863Wild cucumber (PI 183967)cpimeB261
MELO3C005863Cucumber (Chinese Long) v2cumeB175
MELO3C005863Watermelon (Charleston Gray)mewcgB026
MELO3C005863Watermelon (Charleston Gray)mewcgB030
MELO3C005863Watermelon (97103) v1mewmB018
MELO3C005863Watermelon (97103) v1mewmB022
MELO3C005863Watermelon (97103) v1mewmB029
MELO3C005863Cucurbita pepo (Zucchini)cpemeB017
MELO3C005863Cucurbita pepo (Zucchini)cpemeB179
MELO3C005863Cucurbita pepo (Zucchini)cpemeB651
MELO3C005863Bottle gourd (USVL1VR-Ls)lsimeB336
MELO3C005863Bottle gourd (USVL1VR-Ls)lsimeB341
MELO3C005863Cucumber (Gy14) v2cgybmeB142
MELO3C005863Cucumber (Gy14) v2cgybmeB229
MELO3C005863Silver-seed gourdcarmeB0508
MELO3C005863Silver-seed gourdcarmeB0542
MELO3C005863Silver-seed gourdcarmeB0962
MELO3C005863Cucumber (Chinese Long) v3cucmeB168
MELO3C005863Cucumber (Chinese Long) v3cucmeB268
MELO3C005863Cucumber (Chinese Long) v3cucmeB369
MELO3C005863Watermelon (97103) v2mewmbB023
MELO3C005863Watermelon (97103) v2mewmbB027
MELO3C005863Wax gourdmewgoB037
MELO3C005863Melon (DHL92) v3.5.1memeB016
MELO3C005863Melon (DHL92) v3.5.1memeB018
MELO3C005863Melon (DHL92) v3.5.1memeB022