MELO3C005659 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005659
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	O-glucosyltransferase rumi like
Location	chr9 : 22134113 .. 22134453 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGACTGTGATGATCGGCCGGTCGTTAAATCAGCCGATTACCCGAATACGGCAGTGGATACGGTGGGGCCGGCGCCGGTGTTCCGGTATTGCGGGGATGAGGAGGCTTTGGATATAGTGTTCCCGGATTGGTCCTTCTGGGGATGGTAACATCTCTTTTCTTTTCAATTTTTAATCATTTAAAATTCATTAAAATATCATTAAAAAAATGATAAGGAGTATAATTGGATATTTGAAAAATACTTTGGCGAAAATAATATTTTAATTCTTCGAATTTTAATCTTTTTATTAGGACCTTATAATTTCAATTTAGTGGCCCCCCATACGTGTTGAAATAA

mRNA sequence

ATGTTTGACTGTGATGATCGGCCGGTCGTTAAATCAGCCGATTACCCGAATACGGCAGTGGATACGGTGGGGCCGGCGCCGGTGTTCCGGTATTGCGGGGATGAGGAGGCTTTGGATATAGTGTTCCCGGATTGGTCCTTCTGGGGATGTGGCCCCCCATACGTGTTGAAATAA

Coding sequence (CDS)

ATGTTTGACTGTGATGATCGGCCGGTCGTTAAATCAGCCGATTACCCGAATACGGCAGTGGATACGGTGGGGCCGGCGCCGGTGTTCCGGTATTGCGGGGATGAGGAGGCTTTGGATATAGTGTTCCCGGATTGGTCCTTCTGGGGATGTGGCCCCCCATACGTGTTGAAATAA

Protein sequence

MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWGCGPPYVLK*

Homology

[Close]

BLAST of MELO3C005659 vs. TrEMBL
Match: A0A0A0KQX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154780 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-17
Identity = 42/49 (85.71%), Postives = 42/49 (85.71%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVVKSADY N  VDTV   PVFRYCGDEE LDIVFPDWSFWG
Sbjct: 193 MFDCDDRPVVKSADYRNAGVDTVEAPPVFRYCGDEETLDIVFPDWSFWG 241

[Close]

BLAST of MELO3C005659 vs. TrEMBL
Match: B9RDP6_RICCO (KDEL motif-containing protein 1, putative OS=Ricinus communis GN=RCOM_1614780 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.4e-13
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+P     T GP P+FRYC D+ +LDIVFPDWSFWG
Sbjct: 201 MFDCDDRPVVRSEDFPGP---TAGPPPLFRYCADDTSLDIVFPDWSFWG 246

[Close]

BLAST of MELO3C005659 vs. TrEMBL
Match: A0A0A0KB84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003390 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.3e-12
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWGCG 52
           MFDCDDRPVV+S  + N      GP P+FRYC DE +LDIVFPDWSFWG G
Sbjct: 170 MFDCDDRPVVRSNGFMNAIS---GPPPLFRYCSDESSLDIVFPDWSFWGWG 217

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BLAST of MELO3C005659 vs. TrEMBL
Match: M5X7Y2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019065mg PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.3e-12
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+ +      GP P+FRYC DE +LDIVFPDWSFWG
Sbjct: 184 MFDCDDRPVVRSKDFRSP---NAGPPPLFRYCSDEGSLDIVFPDWSFWG 229

[Close]

BLAST of MELO3C005659 vs. TrEMBL
Match: A0A0D2RLM8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G246000 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-11
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFD +DRPV+KS DY     +   P P+FRYCGD+E LDIVFPDWSFWG
Sbjct: 201 MFDTEDRPVIKSRDYKGP--NATAPPPLFRYCGDKETLDIVFPDWSFWG 247

[Close]

BLAST of MELO3C005659 vs. TAIR10
Match: AT1G63420.1 (AT1G63420.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-13
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYP--NTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPV++S  Y   N  V+   P P+FRYCGD   +DIVFPDWSFWG
Sbjct: 249 MFDCDDRPVIRSDGYNILNRTVENA-PPPLFRYCGDRWTVDIVFPDWSFWG 298

[Close]

BLAST of MELO3C005659 vs. TAIR10
Match: AT3G61270.1 (AT3G61270.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 70.9 bits (172), Expect = 3.0e-13
Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFD DDRPVV+S D+     +   P PVFRYC D+ +LDIVFPDWSFWG
Sbjct: 176 MFDADDRPVVRSVDFIGQQKE---PPPVFRYCSDDASLDIVFPDWSFWG 221

[Close]

BLAST of MELO3C005659 vs. TAIR10
Match: AT3G48980.1 (AT3G48980.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 69.7 bits (169), Expect = 6.7e-13
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDC D PVVK+A++    VD   P P+FRYC ++E LDIVFPDWS+WG
Sbjct: 215 MFDCVDWPVVKAAEF--AGVDQPPPPPLFRYCANDETLDIVFPDWSYWG 261

[Close]

BLAST of MELO3C005659 vs. TAIR10
Match: AT5G23850.1 (AT5G23850.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 69.3 bits (168), Expect = 8.7e-13
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDC D PVV++ ++     +   P P+FRYCG+EE LDIVFPDWSFWG
Sbjct: 218 MFDCVDWPVVRATEF--AGANAPSPPPLFRYCGNEETLDIVFPDWSFWG 264

[Close]

BLAST of MELO3C005659 vs. TAIR10
Match: AT2G45830.1 (AT2G45830.1 downstream target of AGL15 2)

HSP 1 Score: 66.6 bits (161), Expect = 5.7e-12
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFD DDRP V+S D+         P P+FRYC D+ +LDIVFPDWSFWG
Sbjct: 198 MFDPDDRPTVRSKDFQGQ--QHPAPPPLFRYCSDDASLDIVFPDWSFWG 244

[Close]

BLAST of MELO3C005659 vs. NCBI nr
Match: gi|449452346|ref|XP_004143920.1| (PREDICTED: O-glucosyltransferase rumi homolog [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-17
Identity = 42/49 (85.71%), Postives = 42/49 (85.71%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVVKSADY N  VDTV   PVFRYCGDEE LDIVFPDWSFWG
Sbjct: 193 MFDCDDRPVVKSADYRNAGVDTVEAPPVFRYCGDEETLDIVFPDWSFWG 241

[Close]

BLAST of MELO3C005659 vs. NCBI nr
Match: gi|657942752|ref|XP_008393993.1| (PREDICTED: protein O-glucosyltransferase 1-like [Malus domestica])

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-13
Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADY--PNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+  PN     VGP PVFRYC DEE+LDIVFPDWSFWG
Sbjct: 201 MFDCDDRPVVRSKDFRGPN-----VGPPPVFRYCADEESLDIVFPDWSFWG 246

[Close]

BLAST of MELO3C005659 vs. NCBI nr
Match: gi|223549015|gb|EEF50504.1| (KDEL motif-containing protein 1 precursor, putative [Ricinus communis])

HSP 1 Score: 81.3 bits (199), Expect = 6.3e-13
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+P     T GP P+FRYC D+ +LDIVFPDWSFWG
Sbjct: 201 MFDCDDRPVVRSEDFPGP---TAGPPPLFRYCADDTSLDIVFPDWSFWG 246

[Close]

BLAST of MELO3C005659 vs. NCBI nr
Match: gi|1000981578|ref|XP_015583184.1| (PREDICTED: O-glucosyltransferase rumi-like, partial [Ricinus communis])

HSP 1 Score: 81.3 bits (199), Expect = 6.3e-13
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADYPNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+P     T GP P+FRYC D+ +LDIVFPDWSFWG
Sbjct: 189 MFDCDDRPVVRSEDFPGP---TAGPPPLFRYCADDTSLDIVFPDWSFWG 234

[Close]

BLAST of MELO3C005659 vs. NCBI nr
Match: gi|1009142270|ref|XP_015888632.1| (PREDICTED: O-glucosyltransferase rumi homolog [Ziziphus jujuba])

HSP 1 Score: 78.6 bits (192), Expect = 4.1e-12
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 1


Query: 1   MFDCDDRPVVKSADY--PNTAVDTVGPAPVFRYCGDEEALDIVFPDWSFWG 50
           MFDCDDRPVV+S D+  PN      GP P+FRYCGD+ +LDIVFPDWSFWG
Sbjct: 57  MFDCDDRPVVRSEDFHDPND-----GPPPLFRYCGDDSSLDIVFPDWSFWG 102

The following BLAST results are available for this feature:

BLAST of MELO3C005659 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQX4_CUCSA	1.3e-17	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G154780 PE=4 SV=1	[more]
B9RDP6_RICCO	4.4e-13	69.39	KDEL motif-containing protein 1, putative OS=Ricinus communis GN=RCOM_1614780 PE...	[more]
A0A0A0KB84_CUCSA	6.3e-12	66.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G003390 PE=4 SV=1	[more]
M5X7Y2_PRUPE	8.3e-12	67.35	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019065mg PE=4 S...	[more]
A0A0D2RLM8_GOSRA	2.4e-11	65.31	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G246000 PE=4 SV=1	[more]

BLAST of MELO3C005659 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63420.1	2.3e-13	62.75	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT3G61270.1	3.0e-13	63.27	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT3G48980.1	6.7e-13	61.22	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT5G23850.1	8.7e-13	59.18	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT2G45830.1	5.7e-12	59.18	downstream target of AGL15 2	[more]

BLAST of MELO3C005659 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452346\|ref\|XP_004143920.1\|	1.9e-17	85.71	PREDICTED: O-glucosyltransferase rumi homolog [Cucumis sativus]	[more]
gi\|657942752\|ref\|XP_008393993.1\|	2.8e-13	74.51	PREDICTED: protein O-glucosyltransferase 1-like [Malus domestica]	[more]
gi\|223549015\|gb\|EEF50504.1\|	6.3e-13	69.39	KDEL motif-containing protein 1 precursor, putative [Ricinus communis]	[more]
gi\|1000981578\|ref\|XP_015583184.1\|	6.3e-13	69.39	PREDICTED: O-glucosyltransferase rumi-like, partial [Ricinus communis]	[more]
gi\|1009142270\|ref\|XP_015888632.1\|	4.1e-12	68.63	PREDICTED: O-glucosyltransferase rumi homolog [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006598	LipoPS_modifying

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0009987	cellular process
biological_process	GO:0008150	biological_process
biological_process	GO:0006298	mismatch repair
biological_process	GO:0006664	glycolipid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005768	endosome
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0043227	membrane-bounded organelle
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046527	glucosyltransferase activity
molecular_function	GO:0030983	mismatched DNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004601	peroxidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005659T1	MELO3C005659T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006598	Lipopolysaccharide-modifying protein	PFAM	PF05686	Glyco_transf_90	coord: 1..50 score: 5.5
None	No IPR available	PANTHER	PTHR12203	KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED	coord: 1..49 score: 2.2
None	No IPR available	PANTHER	PTHR12203:SF28	DOWNSTREAM TARGET OF AGL15 2	coord: 1..49 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005659	ClCG06G003850	Watermelon (Charleston Gray)	mewcgB032
MELO3C005659	ClCG01G002880	Watermelon (Charleston Gray)	mewcgB018
MELO3C005659	Cla97C06G113250	Watermelon (97103) v2	mewmbB030
MELO3C005659	Cla97C01G002960	Watermelon (97103) v2	mewmbB008
MELO3C005659	Bhi12G000229	Wax gourd	mewgoB003
MELO3C005659	Bhi01G000957	Wax gourd	mewgoB040
MELO3C005659	CSPI06G00390	Wild cucumber (PI 183967)	cpimeB412
MELO3C005659	Cucsa.135430	Cucumber (Gy14) v1	cgymeB218
MELO3C005659	Cucsa.302970	Cucumber (Gy14) v1	cgymeB495
MELO3C005659	CmaCh16G001260	Cucurbita maxima (Rimu)	cmameB285
MELO3C005659	CmoCh16G001350	Cucurbita moschata (Rifu)	cmomeB278
MELO3C005659	CmoCh08G008860	Cucurbita moschata (Rifu)	cmomeB799
MELO3C005659	CmoCh18G012700	Cucurbita moschata (Rifu)	cmomeB343
MELO3C005659	Lsi05G012260	Bottle gourd (USVL1VR-Ls)	lsimeB340
MELO3C005659	Lsi09G015560	Bottle gourd (USVL1VR-Ls)	lsimeB011
MELO3C005659	Lsi09G002760	Bottle gourd (USVL1VR-Ls)	lsimeB012
MELO3C005659	Cp4.1LG14g06010	Cucurbita pepo (Zucchini)	cpemeB181
MELO3C005659	Cp4.1LG09g00970	Cucurbita pepo (Zucchini)	cpemeB020
MELO3C005659	CsGy5G002850	Cucumber (Gy14) v2	cgybmeB298
MELO3C005659	CsGy6G000460	Cucumber (Gy14) v2	cgybmeB362
MELO3C005659	CsaV3_5G002970	Cucumber (Chinese Long) v3	cucmeB357
MELO3C005659	CsaV3_6G000440	Cucumber (Chinese Long) v3	cucmeB426

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C005659	MELO3C021220	Melon (DHL92) v3.5.1	memeB010
MELO3C005659	MELO3C006909	Melon (DHL92) v3.5.1	memeB015

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005659	Cucurbita maxima (Rimu)	cmameB250
MELO3C005659	Cucurbita maxima (Rimu)	cmameB530
MELO3C005659	Cucurbita moschata (Rifu)	cmomeB238
MELO3C005659	Cucurbita moschata (Rifu)	cmomeB519
MELO3C005659	Wild cucumber (PI 183967)	cpimeB348
MELO3C005659	Cucumber (Chinese Long) v2	cumeB357
MELO3C005659	Watermelon (97103) v1	mewmB029
MELO3C005659	Cucurbita pepo (Zucchini)	cpemeB156
MELO3C005659	Cucurbita pepo (Zucchini)	cpemeB647
MELO3C005659	Silver-seed gourd	carmeB0903
MELO3C005659	Silver-seed gourd	carmeB0920