MELO3C005612 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGTAATACAAATTTGTAAATACAAAATATTAATTACGACAGTATAACTAATCTGGTTTCTAATTGATATTAAAGTCTATACTCCAAAAGGATAGATCTAAATTTTACTATATTTGTAACTTAAAACGAAAAACAAACGGAAAAAAATACTAACCTAGGGAAAACGGTCAATATCAGACCACATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTTTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAGATAAAATTATCGAGTTGATTATTATGTTATGTGAATTGTTGATCATCATTATTAAGTTTAATAACACTGTATCAGTCGTACAAAGAAGGAGTGCATTATTACTGATTAGCTTGTCAAGAGTATTTATTATTAGCGTAAAAGTAGTATAAACTATTTGCATCGCGACCAACTTTATAAATAATATATTAATCAAGTGCATCATGATCAAGTTTATCAGTAA CGTAATACAAATTTGTAAATACAAAATATTAATTACGACAGTATAACTAATCTGGTTTCTAATTGATATTAAAGTCTATACTCCAAAAGGATAGATCTAAATTTTACTATATTTGTAACTTAAAACGAAAAACAAACGGAAAAAAATACTAACCTAGGGAAAACGGTCAATATCAGACCACATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTTTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAGATAAAATTATCGAGTTGATTATTATGTTATGTGAATTGTTGATCATCATTATTAAGTTTAATAACACTGTATCAGTCGTACAAAGAAGGAGTGCATTATTACTGATTAGCTTGTCAAGAGTATTTATTATTAGCGTAAAAGTAGTATAAACTATTTGCATCGCGACCAACTTTATAAATAATATATTAATCAAGTGCATCATGATCAAGTTTATCAGTAA ATGCAACAGACAGTTAGTTACGTTCAACATATTCAAAGAAGGATTCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTAACAGAAAGAGACTTAGTTCCTCAGAAAGAGACTCAGTGGTGGTGAGAGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAACCACAAAACATAGGCTCCCTTTTTCCATCTTTGTTCAAGCTTTAGTTGTTGAAGGCCTTGAAATCCTGAACTGCATTTCACACAGACTGGATGAGAGGTTTATTCACACCATTGAATGCCAACCTATTCTAAATAATGATGGCTGTTATACAACCATTGATGTCTCTATGTTTCAGCATAAGTTGGCCAATTTGGAATATTATCCTTTAGATTAG MQQTVSYVQHIQRRIQQLKDKRDKLRELANQTNRKRLSSSERDSVVVRAKDGIGIQVVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTIDVSMFQHKLANLEYYPLD*
BLAST of MELO3C005612 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 6.4e-52 Identity = 108/138 (78.26%), Postives = 119/138 (86.23%), Query Frame = 1
BLAST of MELO3C005612 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-27 Identity = 68/139 (48.92%), Postives = 98/139 (70.50%), Query Frame = 1
BLAST of MELO3C005612 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.3e-24 Identity = 61/139 (43.88%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of MELO3C005612 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.4e-24 Identity = 61/139 (43.88%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of MELO3C005612 vs. TrEMBL
Match: A0A067JRT1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20704 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.9e-13 Identity = 45/134 (33.58%), Postives = 84/134 (62.69%), Query Frame = 1
BLAST of MELO3C005612 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 33/110 (30.00%), Postives = 62/110 (56.36%), Query Frame = 1
BLAST of MELO3C005612 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 48.5 bits (114), Expect = 3.7e-06 Identity = 33/103 (32.04%), Postives = 57/103 (55.34%), Query Frame = 1
BLAST of MELO3C005612 vs. NCBI nr
Match: gi|659073666|ref|XP_008437186.1| (PREDICTED: transcription factor bHLH118-like [Cucumis melo]) HSP 1 Score: 265.0 bits (676), Expect = 7.0e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of MELO3C005612 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo]) HSP 1 Score: 222.6 bits (566), Expect = 4.0e-55 Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 1
BLAST of MELO3C005612 vs. NCBI nr
Match: gi|821595469|ref|NP_001295816.1| (transcription factor bHLH118-like [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 9.2e-52 Identity = 108/138 (78.26%), Postives = 119/138 (86.23%), Query Frame = 1
BLAST of MELO3C005612 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-27 Identity = 68/139 (48.92%), Postives = 98/139 (70.50%), Query Frame = 1
BLAST of MELO3C005612 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]) HSP 1 Score: 129.0 bits (323), Expect = 6.0e-27 Identity = 69/139 (49.64%), Postives = 97/139 (69.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |