MELO3C005611.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C005611.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiontranscription factor bHLH120-like
Locationchr09 : 22923765 .. 22924178 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAGACAGTTAGTTACATTCAACATATGCAAAGAAGAATCCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTATGGTCATCATCGGTACGACGGAAACCCTTAATTCCTCAGAAAGGGACTCAGTGGTGGTGAGGGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAGCAACGAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGCTGAAGGCCTTGAAATCCTGAACTGCATTTCAAACAGACTGAATGAGAGGTTTATTCACACCATTGAATGCCAAACTATTCTAAAGGACGATGGCTGTTATCCAACCATTGATGCATCTATGCTTCAGCATAAGTTAGCCAATTTGGAATATTATCCTTTAGATTAG

mRNA sequence

ATGCAAGAGACAGTTAGTTACATTCAACATATGCAAAGAAGAATCCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTATGGTCATCATCGGTACGACGGAAACCCTTAATTCCTCAGAAAGGGACTCAGTGGTGGTGAGGGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAGCAACGAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGCTGAAGGCCTTGAAATCCTGAACTGCATTTCAAACAGACTGAATGAGAGGTTTATTCACACCATTGAATGCCAAACTATTCTAAAGGACGATGGCTGTTATCCAACCATTGATGCATCTATGCTTCAGCATAAGTTAGCCAATTTGGAATATTATCCTTTAGATTAG

Coding sequence (CDS)

ATGCAAGAGACAGTTAGTTACATTCAACATATGCAAAGAAGAATCCAACAACTGAAAGATAAAAGAGATAAGCTAAGAGAACTCGCCAACCAAACTATGGTCATCATCGGTACGACGGAAACCCTTAATTCCTCAGAAAGGGACTCAGTGGTGGTGAGGGCAAAAGATGGAATAGGAATTCAAGTTGTTTTAGACACAGCAACGAAACATAGGCTCCCTCTTTCCATCTTTGTTCAAGCTTTAGTTGCTGAAGGCCTTGAAATCCTGAACTGCATTTCAAACAGACTGAATGAGAGGTTTATTCACACCATTGAATGCCAAACTATTCTAAAGGACGATGGCTGTTATCCAACCATTGATGCATCTATGCTTCAGCATAAGTTAGCCAATTTGGAATATTATCCTTTAGATTAG

Protein sequence

MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDASMLQHKLANLEYYPLD
Homology
[Close]
BLAST of MELO3C005611.2 vs. NCBI nr
Match: XP_016903725.1 (PREDICTED: transcription factor bHLH120-like [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 127/137 (92.70%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           MQETVSYIQ          DKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI
Sbjct: 16  MQETVSYIQXXXXXXXXXXDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 75

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID
Sbjct: 76  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 135

Query: 121 ASMLQHKLANLEYYPLD 138
           ASMLQHKLANLEYYPLD
Sbjct: 136 ASMLQHKLANLEYYPLD 152

[Close]
BLAST of MELO3C005611.2 vs. NCBI nr
Match: NP_001295816.1 (transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcription factor [Cucumis sativus] >KGN50162.1 hypothetical protein Csa_5G156220 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 7.0e-59
Identity = 123/138 (89.13%), Postives = 127/138 (92.03%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMV-IIGTTETLNSSERDSVVVRAKDGIG 60
           MQETVSYIQHMQRRIQQLKDKR  LRELA+QT V I GTTETLNSSER S VVRAKDGIG
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTI 120
           IQVVLDTATK RLPLSIFVQALV+EGLEILNCISNRLNERFIHTIECQ +L DDGCYPTI
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DASMLQHKLANLEYYPLD 138
           D S+LQHKLANLEYYPLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]
BLAST of MELO3C005611.2 vs. NCBI nr
Match: XP_016903726.1 (PREDICTED: transcription factor bHLH126-like [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 3.4e-53
Identity = 112/137 (81.75%), Postives = 120/137 (87.59%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           MQ+TVSY+QH+QRRIQQLKDKR KLRELANQT       + L+SSERDSVVVRAKDGIGI
Sbjct: 11  MQQTVSYVQHIQRRIQQLKDKRXKLRELANQT-----NRKRLSSSERDSVVVRAKDGIGI 70

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDT TKHRLP SIFVQALV EGLEILNCIS+RL+ERFIHTIECQ IL +DGCY TID
Sbjct: 71  QVVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTID 130

Query: 121 ASMLQHKLANLEYYPLD 138
            SM QHKLANLEYYPLD
Sbjct: 131 VSMFQHKLANLEYYPLD 142

[Close]
BLAST of MELO3C005611.2 vs. NCBI nr
Match: XP_022922335.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 172.9 bits (437), Expect = 7.3e-40
Identity = 87/137 (63.50%), Postives = 110/137 (80.29%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           M ETV YIQ+MQRRI+QL DKRD+L+ L+ + M  +G  ETLNSS RDSVVVR+K+G+GI
Sbjct: 116 MHETVKYIQYMQRRIRQLSDKRDELKNLSGENMA-VGMVETLNSSRRDSVVVRSKNGLGI 175

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDT T+HRLP+S  ++ L  EGLEIL+CI+ ++NER++HTIECQ  ++ DG YP+ID
Sbjct: 176 QVVLDTTTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ--VESDGFYPSID 235

Query: 121 ASMLQHKLANLEYYPLD 138
              LQHKL NLEY PLD
Sbjct: 236 VCELQHKLTNLEYLPLD 249

[Close]
BLAST of MELO3C005611.2 vs. NCBI nr
Match: XP_022969885.1 (transcription factor bHLH120-like [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 81/137 (59.12%), Postives = 111/137 (81.02%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           M ETV YIQ +Q RIQQL ++RD+L+ L+ + M  +G  ETLNSS RDSVVV + +G+GI
Sbjct: 101 MHETVKYIQSIQTRIQQLSNQRDELKSLSGENMP-VGAVETLNSSRRDSVVVSSTNGLGI 160

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDTA +HRLP+S  +Q L+AEGLEI++CI+ ++NER++HTIECQ ++++DGCYP+ID
Sbjct: 161 QVVLDTAIQHRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQ-VVENDGCYPSID 220

Query: 121 ASMLQHKLANLEYYPLD 138
              L+H+L NLEY PL+
Sbjct: 221 VFELRHQLINLEYLPLE 235

[Close]
BLAST of MELO3C005611.2 vs. TAIR10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-07
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 0 

Query: 3   ETVSYIQHMQRRIQQLKDKRDK---------------LRELANQTMVIIGTTETLNSSER 62
           E V+YI+ +Q++I+++ +KRD+               +R LA+ T   +G T        
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI------ 177

Query: 63  DSVVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEG-LEILNCISNRLNERFIHTI 105
            +VVVR    IG+++V+    +H   LS  +Q L  E    I++CIS RL++ FIHTI
Sbjct: 178 -AVVVR-PCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTI 227

[Close]
BLAST of MELO3C005611.2 vs. TAIR10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05
Identity = 35/127 (27.56%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 5   VSYIQHMQRRIQQLKDKRDKL-RELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVV 64
           VS+I+  Q RI+ L  +RD+L RE+ + T +              + V+      G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGXXXXXXXXXXXPASVMVQPCVSGFEVV 131

Query: 65  LDTATK--HRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDA 124
           + +        PLS  ++ L  +GLE+++ ++ R+NER ++TI+ +        +   D 
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEV-----NSFDCFDL 191

Query: 125 SMLQHKL 129
           + LQ KL
Sbjct: 192 AWLQQKL 193

[Close]
BLAST of MELO3C005611.2 vs. TAIR10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 0 

Query: 38  TTETLNSSERDSVVVRAK-DGIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRL 97
           T   +  SE  +V+V+    G+ + V  +++    LPLS  ++ +  +GLE+++  + R+
Sbjct: 125 TGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRV 184

Query: 98  NERFIHTIECQTILKDDGCYPTIDASMLQHKL 129
           N+R +HTI+ +  +   GC   ID   LQ KL
Sbjct: 185 NDRLMHTIQVE--VNSFGC---IDLLWLQQKL 211

[Close]
BLAST of MELO3C005611.2 vs. Swiss-Prot
Match: sp|Q9LN95|BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-06
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 0 

Query: 3   ETVSYIQHMQRRIQQLKDKRDK---------------LRELANQTMVIIGTTETLNSSER 62
           E V+YI+ +Q++I+++ +KRD+               +R LA+ T   +G T        
Sbjct: 118 EAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNI------ 177

Query: 63  DSVVVRAKDGIGIQVVLDTATKHRLPLSIFVQALVAEG-LEILNCISNRLNERFIHTI 105
            +VVVR    IG+++V+    +H   LS  +Q L  E    I++CIS RL++ FIHTI
Sbjct: 178 -AVVVR-PCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTI 227

[Close]
BLAST of MELO3C005611.2 vs. Swiss-Prot
Match: sp|Q9FLI0|BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 9.8e-04
Identity = 35/127 (27.56%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 5   VSYIQHMQRRIQQLKDKRDKL-RELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVV 64
           VS+I+  Q RI+ L  +RD+L RE+ + T +              + V+      G +VV
Sbjct: 72  VSFIKDTQTRIKDLSARRDELKREIGDPTSLTGXXXXXXXXXXXPASVMVQPCVSGFEVV 131

Query: 65  LDTATK--HRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDA 124
           + +        PLS  ++ L  +GLE+++ ++ R+NER ++TI+ +        +   D 
Sbjct: 132 VSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEV-----NSFDCFDL 191

Query: 125 SMLQHKL 129
           + LQ KL
Sbjct: 192 AWLQQKL 193

[Close]
BLAST of MELO3C005611.2 vs. TrEMBL
Match: tr|A0A1S4E6V7|A0A1S4E6V7_CUCME (transcription factor bHLH120-like OS=Cucumis melo OX=3656 GN=LOC107992377 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.7e-62
Identity = 127/137 (92.70%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           MQETVSYIQ          DKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI
Sbjct: 16  MQETVSYIQXXXXXXXXXXDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 75

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID
Sbjct: 76  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 135

Query: 121 ASMLQHKLANLEYYPLD 138
           ASMLQHKLANLEYYPLD
Sbjct: 136 ASMLQHKLANLEYYPLD 152

[Close]
BLAST of MELO3C005611.2 vs. TrEMBL
Match: tr|A0A097IYN6|A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.6e-59
Identity = 123/138 (89.13%), Postives = 127/138 (92.03%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMV-IIGTTETLNSSERDSVVVRAKDGIG 60
           MQETVSYIQHMQRRIQQLKDKR  LRELA+QT V I GTTETLNSSER S VVRAKDGIG
Sbjct: 114 MQETVSYIQHMQRRIQQLKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 173

Query: 61  IQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTI 120
           IQVVLDTATK RLPLSIFVQALV+EGLEILNCISNRLNERFIHTIECQ +L DDGCYPTI
Sbjct: 174 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 233

Query: 121 DASMLQHKLANLEYYPLD 138
           D S+LQHKLANLEYYPLD
Sbjct: 234 DVSVLQHKLANLEYYPLD 251

[Close]
BLAST of MELO3C005611.2 vs. TrEMBL
Match: tr|A0A1S4E655|A0A1S4E655_CUCME (transcription factor bHLH126-like OS=Cucumis melo OX=3656 GN=LOC103482690 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 112/137 (81.75%), Postives = 120/137 (87.59%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGI 60
           MQ+TVSY+QH+QRRIQQLKDKR KLRELANQT       + L+SSERDSVVVRAKDGIGI
Sbjct: 11  MQQTVSYVQHIQRRIQQLKDKRXKLRELANQT-----NRKRLSSSERDSVVVRAKDGIGI 70

Query: 61  QVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTID 120
           QVVLDT TKHRLP SIFVQALV EGLEILNCIS+RL+ERFIHTIECQ IL +DGCY TID
Sbjct: 71  QVVLDTTTKHRLPFSIFVQALVVEGLEILNCISHRLDERFIHTIECQPILNNDGCYTTID 130

Query: 121 ASMLQHKLANLEYYPLD 138
            SM QHKLANLEYYPLD
Sbjct: 131 VSMFQHKLANLEYYPLD 142

[Close]
BLAST of MELO3C005611.2 vs. TrEMBL
Match: tr|A0A1S3ATY1|A0A1S3ATY1_CUCME (transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103482687 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 9.1e-31
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLREL-ANQTMVIIGTTETLNSSERDSVVVRAKDGI- 60
           M ETV YI++MQ +IQ+L DKRD+L++L +N     +  TETL S++RD VVVRA+DG  
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGSG 181

Query: 61  GIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPT 120
           GIQV+LDTAT+HRLPLS  + AL  +GLEIL+C SN+LN+RF+HTIE Q +       P 
Sbjct: 182 GIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNS-PI 241

Query: 121 IDASMLQHKLANLEYYPLD 138
           ID S LQ+ L NLEY PLD
Sbjct: 242 IDVSGLQYTLTNLEYCPLD 259

[Close]
BLAST of MELO3C005611.2 vs. TrEMBL
Match: tr|A0A0A0KKN9|A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 0 

Query: 1   MQETVSYIQHMQRRIQQLKDKRDKLREL-ANQTMVIIGTTETLNSSERDSVVVRAKDGI- 60
           M ETV YI++MQ +IQ+L DKRD+L++L +N     +  TETL S++RD VVVRA+DG  
Sbjct: 122 MHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSG 181

Query: 61  GIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPT 120
           GIQV+LDT T+HRL LS  ++AL+ +G EIL+C SN+LN+RF+HTIE Q  +  D   P 
Sbjct: 182 GIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNSPL 241

Query: 121 IDASMLQHKLANLEYYPLD 138
           ID S LQ+ LANLEY PLD
Sbjct: 242 IDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:
BLAST of MELO3C005611.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903725.11.2e-6192.70PREDICTED: transcription factor bHLH120-like [Cucumis melo][more]
NP_001295816.17.0e-5989.13transcription factor bHLH118-like [Cucumis sativus] >AIT72026.1 bHLH transcripti... [more]
XP_016903726.13.4e-5381.75PREDICTED: transcription factor bHLH126-like [Cucumis melo][more]
XP_022922335.17.3e-4063.50transcription factor bHLH118-like [Cucurbita moschata][more]
XP_022969885.11.2e-3759.12transcription factor bHLH120-like [Cucurbita maxima][more]
BLAST of MELO3C005611.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12540.13.4e-0733.05basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51790.15.4e-0527.56basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25410.11.2e-0430.43basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of MELO3C005611.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LN95|BH055_ARATH6.1e-0633.05Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1[more]
sp|Q9FLI0|BH120_ARATH9.8e-0427.56Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=... [more]
BLAST of MELO3C005611.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E6V7|A0A1S4E6V7_CUCME7.7e-6292.70transcription factor bHLH120-like OS=Cucumis melo OX=3656 GN=LOC107992377 PE=4 S... [more]
tr|A0A097IYN6|A0A097IYN6_CUCSA4.6e-5989.13BHLH transcription factor OS=Cucumis sativus OX=3659 GN=Csa5G156220 PE=2 SV=1[more]
tr|A0A1S4E655|A0A1S4E655_CUCME2.2e-5381.75transcription factor bHLH126-like OS=Cucumis melo OX=3656 GN=LOC103482690 PE=4 S... [more]
tr|A0A1S3ATY1|A0A1S3ATY1_CUCME9.1e-3157.55transcription factor bHLH36-like OS=Cucumis melo OX=3656 GN=LOC103482687 PE=4 SV... [more]
tr|A0A0A0KKN9|A0A0A0KKN9_CUCSA1.6e-3056.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157220 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR015660MASH1/Ascl1a-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005611.2.1MELO3C005611.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..31
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 1..130
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 1..130

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005611.2Bhi12G000316Wax gourdmedwgoB010
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005611.2Cucumber (Gy14) v2cgybmedB136
MELO3C005611.2Cucumber (Gy14) v2cgybmedB137
MELO3C005611.2Cucumber (Gy14) v2cgybmedB140
MELO3C005611.2Cucumber (Gy14) v2cgybmedB298
MELO3C005611.2Cucumber (Gy14) v1cgymedB421
MELO3C005611.2Cucumber (Gy14) v1cgymedB422
MELO3C005611.2Cucumber (Gy14) v1cgymedB494
MELO3C005611.2Cucumber (Gy14) v1cgymedB531
MELO3C005611.2Cucurbita maxima (Rimu)cmamedB284
MELO3C005611.2Cucurbita maxima (Rimu)cmamedB407
MELO3C005611.2Cucurbita maxima (Rimu)cmamedB609
MELO3C005611.2Cucurbita maxima (Rimu)cmamedB843
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB270
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB315
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB392
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB596
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB834
MELO3C005611.2Cucurbita moschata (Rifu)cmomedB835
MELO3C005611.2Cucurbita pepo (Zucchini)cpemedB024
MELO3C005611.2Cucurbita pepo (Zucchini)cpemedB183
MELO3C005611.2Cucurbita pepo (Zucchini)cpemedB774
MELO3C005611.2Cucurbita pepo (Zucchini)cpemedB928
MELO3C005611.2Wild cucumber (PI 183967)cpimedB153
MELO3C005611.2Wild cucumber (PI 183967)cpimedB154
MELO3C005611.2Wild cucumber (PI 183967)cpimedB158
MELO3C005611.2Wild cucumber (PI 183967)cpimedB338
MELO3C005611.2Cucumber (Chinese Long) v2cumedB154
MELO3C005611.2Cucumber (Chinese Long) v2cumedB336
MELO3C005611.2Melon (DHL92) v3.6.1medmedB012
MELO3C005611.2Melon (DHL92) v3.6.1medmedB013
MELO3C005611.2Melon (DHL92) v3.6.1medmedB017
MELO3C005611.2Bottle gourd (USVL1VR-Ls)lsimedB012
MELO3C005611.2Bottle gourd (USVL1VR-Ls)lsimedB354
MELO3C005611.2Bottle gourd (USVL1VR-Ls)lsimedB357
MELO3C005611.2Bottle gourd (USVL1VR-Ls)lsimedB446
MELO3C005611.2Watermelon (Charleston Gray)medwcgB016
MELO3C005611.2Watermelon (Charleston Gray)medwcgB004
MELO3C005611.2Watermelon (Charleston Gray)medwcgB025
MELO3C005611.2Watermelon (97103) v1medwmB015
MELO3C005611.2Watermelon (97103) v1medwmB027
MELO3C005611.2Silver-seed gourdcarmedB0499
MELO3C005611.2Silver-seed gourdcarmedB0627
MELO3C005611.2Silver-seed gourdcarmedB0865
MELO3C005611.2Silver-seed gourdcarmedB0910
MELO3C005611.2Silver-seed gourdcarmedB0927
MELO3C005611.2Cucumber (Chinese Long) v3cucmedB154
MELO3C005611.2Cucumber (Chinese Long) v3cucmedB155
MELO3C005611.2Cucumber (Chinese Long) v3cucmedB159
MELO3C005611.2Cucumber (Chinese Long) v3cucmedB349
MELO3C005611.2Watermelon (97103) v2medwmbB006
MELO3C005611.2Watermelon (97103) v2medwmbB010
MELO3C005611.2Watermelon (97103) v2medwmbB021
MELO3C005611.2Watermelon (97103) v2medwmbB026
MELO3C005611.2Wax gourdmedwgoB037
MELO3C005611.2Wax gourdmedwgoB039