MELO3C005227 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005227
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProbable nicotinate-nucleotide adenylyltransferase
Locationchr9 : 17660599 .. 17660751 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCACCGCCGCCGATGCTCCTCGCTGGATTCCGAAACGCGGGGAAGTTCTCCGTCGTGTTCTTAAAAAGCTGTTTTACTTCTGCCTCTGCTCTGCCCCTGCTCTGCCGCCGCCCACGCGATCCTCGTCTCGCGTTTTTCCTCACTAA

mRNA sequence

ATGGCCGCCACCGCCGCCGATGCTCCTCGCTGGATTCCGAAACGCGGGGAAGTTCTCCGTCGTGTTCTTAAAAAGCTGTTTTACTTCTGCCTCTGCTCTGCCCCTGCTCTGCCGCCGCCCACGCGATCCTCGTCTCGCGTTTTTCCTCACTAA

Coding sequence (CDS)

ATGGCCGCCACCGCCGCCGATGCTCCTCGCTGGATTCCGAAACGCGGGGAAGTTCTCCGTCGTGTTCTTAAAAAGCTGTTTTACTTCTGCCTCTGCTCTGCCCCTGCTCTGCCGCCGCCCACGCGATCCTCGTCTCGCGTTTTTCCTCACTAA

Protein sequence

MAATAADAPRWIPKRGEVLRRVLKKLFYFCLCSAPALPPPTRSSSRVFPH*
Homology
[Close]
BLAST of MELO3C005227 vs. TrEMBL
Match: A0A0A0KPU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G098990 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-14
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 6  ADAPRWIPKRGEVLRRVLKKLFYFCLCSAPALPPPTRSSSRVF 49
          A+APRWIPKRGEVLRRVLK LF+FCLCS PALPPPT SSSRVF
Sbjct: 4  AEAPRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTPSSSRVF 46

[Close]
BLAST of MELO3C005227 vs. NCBI nr
Match: gi|700194569|gb|KGN49746.1| (hypothetical protein Csa_5G098990 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 8.5e-14
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 1 

Query: 6  ADAPRWIPKRGEVLRRVLKKLFYFCLCSAPALPPPTRSSSRVF 49
          A+APRWIPKRGEVLRRVLK LF+FCLCS PALPPPT SSSRVF
Sbjct: 4  AEAPRWIPKRGEVLRRVLKNLFFFCLCSPPALPPPTPSSSRVF 46

The following BLAST results are available for this feature:
BLAST of MELO3C005227 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPU0_CUCSA6.0e-1488.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G098990 PE=4 SV=1[more]
BLAST of MELO3C005227 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194569|gb|KGN49746.1|8.5e-1488.37hypothetical protein Csa_5G098990 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55212melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005227T1MELO3C005227T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55212MU55212transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005227Cla005828Watermelon (97103) v1mewmB030
MELO3C005227CsGy5G012130Cucumber (Gy14) v2cgybmeB302
MELO3C005227CsaV3_5G017260Cucumber (Chinese Long) v3cucmeB361
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005227Silver-seed gourdcarmeB0821
MELO3C005227Watermelon (97103) v2mewmbB009
MELO3C005227Wax gourdmewgoB012
MELO3C005227Cucumber (Gy14) v1cgymeB626
MELO3C005227Cucurbita maxima (Rimu)cmameB252
MELO3C005227Cucurbita maxima (Rimu)cmameB635
MELO3C005227Cucurbita moschata (Rifu)cmomeB240
MELO3C005227Cucurbita moschata (Rifu)cmomeB625
MELO3C005227Wild cucumber (PI 183967)cpimeB352
MELO3C005227Cucumber (Chinese Long) v2cumeB362
MELO3C005227Watermelon (Charleston Gray)mewcgB019
MELO3C005227Cucurbita pepo (Zucchini)cpemeB157
MELO3C005227Cucurbita pepo (Zucchini)cpemeB359
MELO3C005227Bottle gourd (USVL1VR-Ls)lsimeB013