MELO3C005219 (gene) Melon (DHL92) v3.5.1

NameMELO3C005219
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPlant self-incompatibility protein S1 family
Locationchr9 : 17572701 .. 17573111 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

mRNA sequence

ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

Coding sequence (CDS)

ATGCAAACTCACCAGAGAAAGGTCATCGTCATGAGGGAGAGAAAGGAAGAAAGGGGGGACAGGAGGAGGACCGGATGGAGTAGAGAAGGAGAAAAGGGGGAAGTAGCGAAGGGAGTTGAGTTCTCTAAGAATAACAAGACAAGAGAGGGAAATGGCAGTGAAGAGAAGAAGAATGTGAAGAGAACAGCGGAAGGAGTAGTAAATAAACATGGCGGAAATGTAAGAAGAATTAAGAAGGCAGCAGAGATGATAGGCATTACATTACAATTACAGGGGGGAATGAATGAGAAAGGTCTAGGGTTGAAGATCCCAACAGAAAAAGGATCATATTCGTCGAAGGAGAGAGGAGGAGGAGGAGGAGGAGGAGAATCAAGAGTTTATAGGCGCTTTGTAGAGTGGAAGAGTGTGTAG

Protein sequence

MQTHQRKVIVMRERKEERGDRRRTGWSREGEKGEVAKGVEFSKNNKTREGNGSEEKKNVKRTAEGVVNKHGGNVRRIKKAAEMIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYRRFVEWKSV*
BLAST of MELO3C005219 vs. TrEMBL
Match: A0A0A0KJ43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G107040 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07
Identity = 35/46 (76.09%), Postives = 36/46 (78.26%), Query Frame = 1

Query: 83  MIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYR 129
           MIGIT+Q  GGMN KGLGLKI TEK  Y  KERG  GGGGESRVYR
Sbjct: 1   MIGITMQ--GGMNGKGLGLKIRTEKRPYWWKERGRRGGGGESRVYR 44

BLAST of MELO3C005219 vs. NCBI nr
Match: gi|700194578|gb|KGN49755.1| (hypothetical protein Csa_5G107040 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-07
Identity = 35/46 (76.09%), Postives = 36/46 (78.26%), Query Frame = 1

Query: 83  MIGITLQLQGGMNEKGLGLKIPTEKGSYSSKERGGGGGGGESRVYR 129
           MIGIT+Q  GGMN KGLGLKI TEK  Y  KERG  GGGGESRVYR
Sbjct: 1   MIGITMQ--GGMNGKGLGLKIRTEKRPYWWKERGRRGGGGESRVYR 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJ43_CUCSA1.3e-0776.09Uncharacterized protein OS=Cucumis sativus GN=Csa_5G107040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700194578|gb|KGN49755.1|1.9e-0776.09hypothetical protein Csa_5G107040 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU62187melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005219T1MELO3C005219T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU62187MU62187transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None