MELO3C005162 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005162
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	WD-repeat protein, putative
Location	chr9 : 16890003 .. 16900847 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGGCGATCCCCAACAGTTTCAGCAGCAGCATCAGCAGCCGCCGAATCAGCATCCTCTTGGTGGGGATTTCTCAAGAGGCCCGCCCCCGCCAGGGCCACCCATGATGAGGCAGCCATCTGCTTCTTCAACTACACTTGCTCCCGAGTTTCAACAGCACCATCATCCTCGCCATCCCTCTGGCCCTGCTCCTCCTCCTTACGAAGGTAAAAAAAACTCTCTTTTCTGTTATCTAGTTTCTGACGTTGCGAGTTTCTTCTGCAACCCAAGTCGTTTTAGACTTTCGGTTGGTTGCTGGAATTTCTGGGGGTGTTGTTAACTTTGTCAATGGGGCATTGGATGTGTAG

mRNA sequence

ATGTACGGCGATCCCCAACAGTTTCAGCAGCAGCATCAGCAGCCGCCGAATCAGCATCCTCTTGGTGGGGATTTCTCAAGAGGCCCGCCCCCGCCAGGGCCACCCATGATGAGGCAGCCATCTGCTTCTTCAACTACACTTGCTCCCGAGTTTCAACAGCACCATCATCCTCGCCATCCCTCTGGCCCTGCTCCTCCTCCTTACGAAGTCGTTTTAGACTTTCGGTTGGTTGCTGGAATTTCTGGGGGTGTTGTTAACTTTGTCAATGGGGCATTGGATGTGTAG

Coding sequence (CDS)

ATGTACGGCGATCCCCAACAGTTTCAGCAGCAGCATCAGCAGCCGCCGAATCAGCATCCTCTTGGTGGGGATTTCTCAAGAGGCCCGCCCCCGCCAGGGCCACCCATGATGAGGCAGCCATCTGCTTCTTCAACTACACTTGCTCCCGAGTTTCAACAGCACCATCATCCTCGCCATCCCTCTGGCCCTGCTCCTCCTCCTTACGAAGTCGTTTTAGACTTTCGGTTGGTTGCTGGAATTTCTGGGGGTGTTGTTAACTTTGTCAATGGGGCATTGGATGTGTAG

Protein sequence

MYGDPQQFQQQHQQPPNQHPLGGDFSRGPPPPGPPMMRQPSASSTTLAPEFQQHHHPRHPSGPAPPPYEVVLDFRLVAGISGGVVNFVNGALDV*

Homology

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BLAST of MELO3C005162 vs. Swiss-Prot
Match: FY_ARATH (Flowering time control protein FY OS=Arabidopsis thaliana GN=FY PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 6.3e-85
Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 1


Query: 3   DSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAYSD 62
           DSF AKRMRK TQRRAVDYTSTVVRY+Q R WQRDS+DRT LQ TPAAA+DMLP  AYSD
Sbjct: 45  DSFGAKRMRKHTQRRAVDYTSTVVRYIQARTWQRDSRDRTTLQPTPAAAVDMLPTVAYSD 104

Query: 63  NPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAH 122
           NPSTSFAAKFVH S+NKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAH
Sbjct: 105 NPSTSFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAH 164

Query: 123 DQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           DQ IRSMVWSHN+N+MVSGDDGG++KYWQNNMNNVKANK+AHKES+RDL
Sbjct: 165 DQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDL 213

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BLAST of MELO3C005162 vs. Swiss-Prot
Match: WDR33_HUMAN (pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33 PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-49
Identity = 87/167 (52.10%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 4   SFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAYSDN 63
           +F  KRMRK   R+ +DY  +V++Y++ R+WQRD +D   +Q       D++PP    +N
Sbjct: 42  TFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNN 101

Query: 64  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHD 123
           P  +   KFV TS NK +C +  V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD
Sbjct: 102 PMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHD 161

Query: 124 QAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD 171
             +R+M WSHND WM++ D GG +KYWQ+NMNNVK  + AHKE++R+
Sbjct: 162 SPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIRE 207

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BLAST of MELO3C005162 vs. Swiss-Prot
Match: WDR33_MOUSE (pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-49
Identity = 87/167 (52.10%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 4   SFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAYSDN 63
           +F  KRMRK   R+ +DY  +V++Y++ R+WQRD +D   +Q       D++PP    +N
Sbjct: 42  TFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNN 101

Query: 64  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHD 123
           P  +   KFV TS NK +C +  V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD
Sbjct: 102 PMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHD 161

Query: 124 QAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRD 171
             +R+M WSHND WM++ D GG +KYWQ+NMNNVK  + AHKE++R+
Sbjct: 162 SPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIRE 207

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BLAST of MELO3C005162 vs. Swiss-Prot
Match: PFS2_NEUCR (Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=paa-1 PE=3 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-38
Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 11  RKLTQRRAVDYTSTVVRYMQLRMWQ-RDSKDRTVLQSTPAAAIDMLPPAAYSDNPSTSFA 70
           R   +R   DY ++VV YM+ R  + R S    V + +P+  +DMLPP A   NP+ S  
Sbjct: 25  RNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADSVP 84

Query: 71  AKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSM 130
           ++ +H+S+NK +  IN V WTP GRRL+T S SGEFTLWNG  FNFE I+QAHD AIR++
Sbjct: 85  SRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRAL 144

Query: 131 VWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           V+SH+D+W+VS D  G IKYWQ N NNV++ +  H + +RDL
Sbjct: 145 VYSHSDDWLVSADHDGIIKYWQPNFNNVESIR-GHTDPIRDL 185

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BLAST of MELO3C005162 vs. Swiss-Prot
Match: PFS2_SCHPO (Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pfs2 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.1e-36
Identity = 76/165 (46.06%), Postives = 104/165 (63.03%), Query Frame = 1


Query: 7   AKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAYSDNPST 66
           A+ ++K   RR VDY S + +Y+  R  + +     V +  P   I++ PP  Y  N ++
Sbjct: 7   ARIIQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEYKYNNTS 66

Query: 67  SFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAI 126
           S   K++HTS NK R  IN V WTP GRRL+TGS +GEFTLWNG +FNFE+I Q+HD A+
Sbjct: 67  SLCTKYIHTSANKARHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAV 126

Query: 127 RSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           R   WS +  W++SGD GG +KY++ N+NNVK    AH+  VRD+
Sbjct: 127 RCAEWSTDGRWLISGDGGGMVKYFEPNLNNVKI-VQAHEMEVRDV 170

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BLAST of MELO3C005162 vs. TrEMBL
Match: A0A0A0KTQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G431540 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.0e-94
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           H DSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY
Sbjct: 19  HSDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 78

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 79  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 138

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 139 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 189

[Close]

BLAST of MELO3C005162 vs. TrEMBL
Match: V4U418_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004445mg PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.4e-91
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRDS+DRTVLQ+TPAAAIDMLP  AY
Sbjct: 64  HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAY 123

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           +DNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 124 ADNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 183

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHD AIRSMVWSHNDNWMVSGDDGG+IKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 184 AHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 234

[Close]

BLAST of MELO3C005162 vs. TrEMBL
Match: W9R8M6_9ROSA (Flowering time control protein FY OS=Morus notabilis GN=L484_023952 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.0e-91
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           H D FAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRDS+DRT+LQ TPAAA+DMLP  AY
Sbjct: 60  HADGFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTILQPTPAAAVDMLPTVAY 119

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 120 SDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 179

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDLR 173
           AHDQAIRSMVWSHNDNWMVSGDDGG+IKYWQNNMNNVKANKSAHKESVRDLR
Sbjct: 180 AHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLR 231

[Close]

BLAST of MELO3C005162 vs. TrEMBL
Match: M5XK25_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016388mg PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-90
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           H D FAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRD++DRTVLQ TPAAAIDMLP  AY
Sbjct: 68  HPDGFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDARDRTVLQPTPAAAIDMLPTVAY 127

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 128 SDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 187

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 188 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 238

[Close]

BLAST of MELO3C005162 vs. TrEMBL
Match: A0A061FYJ3_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_045257 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 5.9e-90
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           HGD+FAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRDS+DRTVLQ TPAAAID+LP AAY
Sbjct: 61  HGDNFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDVLPTAAY 120

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
            DNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 121 IDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 180

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGG+IKYWQNNMNNVK NKSAHKESVRDL
Sbjct: 181 AHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKFNKSAHKESVRDL 231

[Close]

BLAST of MELO3C005162 vs. TAIR10
Match: AT5G13480.2 (AT5G13480.2 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 302.0 bits (772), Expect = 2.4e-82
Identity = 148/192 (77.08%), Postives = 157/192 (81.77%), Query Frame = 1


Query: 3   DSFAAKRMRKLTQRRAVDYTSTVVRYMQL-----------------------RMWQRDSK 62
           DSF AKRMRK TQRRAVDYTSTVVRY+Q                        R WQRDS+
Sbjct: 28  DSFGAKRMRKHTQRRAVDYTSTVVRYIQFNELILYMELKVESVYSIYVFVQARTWQRDSR 87

Query: 63  DRTVLQSTPAAAIDMLPPAAYSDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITG 122
           DRT LQ TPAAA+DMLP  AYSDNPSTSFAAKFVH S+NKNRCSINRVLWTP+GRRLITG
Sbjct: 88  DRTTLQPTPAAAVDMLPTVAYSDNPSTSFAAKFVHASLNKNRCSINRVLWTPSGRRLITG 147

Query: 123 SQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKA 172
           SQSGEFTLWNGQSFNFEMILQAHDQ IRSMVWSHN+N+MVSGDDGG++KYWQNNMNNVKA
Sbjct: 148 SQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKA 207

[Close]

BLAST of MELO3C005162 vs. TAIR10
Match: AT5G64630.2 (AT5G64630.2 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-07
Identity = 28/107 (26.17%), Postives = 48/107 (44.86%), Query Frame = 1


Query: 64  PSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLW------NGQSFNFEM 123
           PS S+      +S+  + C++N + ++P+G  L +G+  GE  +W        QS+    
Sbjct: 52  PSVSY-----QSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHK 111

Query: 124 ILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAH 165
            L  H + +  + WS +D +++SG    S   W  N  +V     AH
Sbjct: 112 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153

[Close]

BLAST of MELO3C005162 vs. NCBI nr
Match: gi|659072523|ref|XP_008465965.1| (PREDICTED: flowering time control protein FY [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.1e-94
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY
Sbjct: 71  HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 130

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 131 SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 190

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 191 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 241

[Close]

BLAST of MELO3C005162 vs. NCBI nr
Match: gi|778702708|ref|XP_004140291.2| (PREDICTED: flowering time control protein FY [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 5.7e-94
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           H DSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY
Sbjct: 71  HSDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 130

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 131 SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 190

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 191 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 241

[Close]

BLAST of MELO3C005162 vs. NCBI nr
Match: gi|700195909|gb|KGN51086.1| (hypothetical protein Csa_5G431540 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 5.7e-94
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           H DSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY
Sbjct: 19  HSDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 78

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 79  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 138

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 139 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 189

[Close]

BLAST of MELO3C005162 vs. NCBI nr
Match: gi|568833326|ref|XP_006470851.1| (PREDICTED: flowering time control protein FY isoform X1 [Citrus sinensis])

HSP 1 Score: 341.7 bits (875), Expect = 7.7e-91
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRDS+DRTVLQ+TPAAAIDMLP  AY
Sbjct: 64  HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAY 123

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           +DNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 124 TDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 183

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHD AIRSMVWSHNDNWMVSGDDGG+IKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 184 AHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 234

[Close]

BLAST of MELO3C005162 vs. NCBI nr
Match: gi|567855229|ref|XP_006420734.1| (hypothetical protein CICLE_v10004445mg [Citrus clementina])

HSP 1 Score: 341.7 bits (875), Expect = 7.7e-91
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 1


Query: 1   HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLPPAAY 60
           HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQ+RMWQRDS+DRTVLQ+TPAAAIDMLP  AY
Sbjct: 64  HGDSFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAY 123

Query: 61  SDNPSTSFAAKFVHTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 120
           +DNPSTSFAAKFVHTS+NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ
Sbjct: 124 ADNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQ 183

Query: 121 AHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDL 172
           AHD AIRSMVWSHNDNWMVSGDDGG+IKYWQNNMNNVKANKSAHKESVRDL
Sbjct: 184 AHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 234

The following BLAST results are available for this feature:

BLAST of MELO3C005162 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FY_ARATH	6.3e-85	87.57	Flowering time control protein FY OS=Arabidopsis thaliana GN=FY PE=1 SV=1	[more]
WDR33_HUMAN	1.5e-49	52.10	pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33 PE=1 SV=2	[more]
WDR33_MOUSE	1.5e-49	52.10	pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33 PE=1 SV=1	[more]
PFS2_NEUCR	1.5e-38	50.00	Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR...	[more]
PFS2_SCHPO	7.1e-36	46.06	Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]

BLAST of MELO3C005162 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTQ4_CUCSA	4.0e-94	99.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G431540 PE=4 SV=1	[more]
V4U418_9ROSI	5.4e-91	94.74	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004445mg PE=4 SV=1	[more]
W9R8M6_9ROSA	7.0e-91	93.60	Flowering time control protein FY OS=Morus notabilis GN=L484_023952 PE=4 SV=1	[more]
M5XK25_PRUPE	2.7e-90	94.74	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016388mg PE=4 S...	[more]
A0A061FYJ3_THECC	5.9e-90	94.15	Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_045257...	[more]

BLAST of MELO3C005162 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13480.2	2.4e-82	77.08	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64630.2	5.6e-07	26.17	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of MELO3C005162 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072523\|ref\|XP_008465965.1\|	1.1e-94	100.00	PREDICTED: flowering time control protein FY [Cucumis melo]	[more]
gi\|778702708\|ref\|XP_004140291.2\|	5.7e-94	99.42	PREDICTED: flowering time control protein FY [Cucumis sativus]	[more]
gi\|700195909\|gb\|KGN51086.1\|	5.7e-94	99.42	hypothetical protein Csa_5G431540 [Cucumis sativus]	[more]
gi\|568833326\|ref\|XP_006470851.1\|	7.7e-91	94.74	PREDICTED: flowering time control protein FY isoform X1 [Citrus sinensis]	[more]
gi\|567855229\|ref\|XP_006420734.1\|	7.7e-91	94.74	hypothetical protein CICLE_v10004445mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0016573	histone acetylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU67365	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005162T3	MELO3C005162T3	mRNA
MELO3C005162T2	MELO3C005162T2	mRNA
MELO3C005162T1	MELO3C005162T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU67365	MU67365	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005162	CmoCh15G008670	Cucurbita moschata (Rifu)	cmomeB240
MELO3C005162	CmoCh04G022960	Cucurbita moschata (Rifu)	cmomeB625

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005162	Cucurbita maxima (Rimu)	cmameB252
MELO3C005162	Cucurbita maxima (Rimu)	cmameB635
MELO3C005162	Cucumber (Chinese Long) v2	cumeB363
MELO3C005162	Watermelon (Charleston Gray)	mewcgB019
MELO3C005162	Watermelon (97103) v1	mewmB030
MELO3C005162	Cucurbita pepo (Zucchini)	cpemeB157
MELO3C005162	Cucurbita pepo (Zucchini)	cpemeB359
MELO3C005162	Bottle gourd (USVL1VR-Ls)	lsimeB013
MELO3C005162	Cucumber (Gy14) v2	cgybmeB303
MELO3C005162	Silver-seed gourd	carmeB0483
MELO3C005162	Silver-seed gourd	carmeB0821
MELO3C005162	Cucumber (Chinese Long) v3	cucmeB362
MELO3C005162	Watermelon (97103) v2	mewmbB009
MELO3C005162	Wax gourd	mewgoB012