MELO3C005159 (gene) Melon (DHL92) v3.5.1

NameMELO3C005159
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative pol protein
Locationchr9 : 16849604 .. 16849966 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTATTATGGAATAACAGTAAACAATGTTCCTAAATCTGAGAGAGTGCCTTTAGATGTTTCTTATGAAGCTTTATCAAAAAAGGGTAAAGTTAATGATGAGCAATATAGAACAGAAGAAAACCCAGTTTGTGACCATACAGAGGCTTCAGTAAGTAAAGAGTCAAGTGCTCAACTGTTTGCTTTGTCAGCCCATGTAAAGAAGAATCATCCAGTCAGTAGTGCTATTAGGGATGTTAACAGTGGAATCATGACAAGAAAGAAAAATAGGCTACACTATGCCAAGATGAAATCCAATGTATGCTTTACATCTACAATAGAACCTACTAGTGTAACTGAGGCTATGAAGGATGAACGATGA

mRNA sequence

ATGGTCTATTATGGAATAACAGTAAACAATGTTCCTAAATCTGAGAGAGTGCCTTTAGATGTTTCTTATGAAGCTTTATCAAAAAAGGGTAAAGTTAATGATGAGCAATATAGAACAGAAGAAAACCCAGTTTGTGACCATACAGAGGCTTCAGTAAGTAAAGAGTCAAGTGCTCAACTGTTTGCTTTGTCAGCCCATGTAAAGAAGAATCATCCAGTCAGTAGTGCTATTAGGGATGTTAACAGTGGAATCATGACAAGAAAGAAAAATAGGCTACACTATGCCAAGATGAAATCCAATGTATGCTTTACATCTACAATAGAACCTACTAGTGTAACTGAGGCTATGAAGGATGAACGATGA

Coding sequence (CDS)

ATGGTCTATTATGGAATAACAGTAAACAATGTTCCTAAATCTGAGAGAGTGCCTTTAGATGTTTCTTATGAAGCTTTATCAAAAAAGGGTAAAGTTAATGATGAGCAATATAGAACAGAAGAAAACCCAGTTTGTGACCATACAGAGGCTTCAGTAAGTAAAGAGTCAAGTGCTCAACTGTTTGCTTTGTCAGCCCATGTAAAGAAGAATCATCCAGTCAGTAGTGCTATTAGGGATGTTAACAGTGGAATCATGACAAGAAAGAAAAATAGGCTACACTATGCCAAGATGAAATCCAATGTATGCTTTACATCTACAATAGAACCTACTAGTGTAACTGAGGCTATGAAGGATGAACGATGA

Protein sequence

MVYYGITVNNVPKSERVPLDVSYEALSKKGKVNDEQYRTEENPVCDHTEASVSKESSAQLFALSAHVKKNHPVSSAIRDVNSGIMTRKKNRLHYAKMKSNVCFTSTIEPTSVTEAMKDER*
BLAST of MELO3C005159 vs. NCBI nr
Match: gi|659124383|ref|XP_008462132.1| (PREDICTED: uncharacterized protein LOC103500561 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = 1

Query: 34  DEQYRTEENPVCDHTEASVSKE--SSAQLFALSAHVKKNHPVSSAIRDVNSGIMTRKKNR 93
           DE  + +  P    T+++++ E  ++  +   SAHVKKNHP SS I D ++GI TR+K +
Sbjct: 37  DEMPKGDSQPDNAKTDSTITDEVINNETVLFPSAHVKKNHPSSSMIGDPSAGITTRRKEK 96

Query: 94  LHYAKMKSNVCFTSTIEPTSVTEAMKDE 120
           + Y KM +++C+ S IEPTS    +KDE
Sbjct: 97  VDYTKMIADLCYVSAIEPTSFENTLKDE 124

BLAST of MELO3C005159 vs. NCBI nr
Match: gi|659116516|ref|XP_008458108.1| (PREDICTED: uncharacterized protein LOC103497638 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 6.7e-09
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1

Query: 34  DEQYRTEENPVCDHTEASVSKE--SSAQLFALSAHVKKNHPVSSAIRDVNSGIMTRKKNR 93
           DE  + +  P    T ++++ E  ++  +   SAHVKKNH  SS I D ++GI T+ K +
Sbjct: 589 DEMPKGDSQPDSAKTNSNITDEVINNETVLVPSAHVKKNHLSSSIIGDPSAGITTKWKEK 648

Query: 94  LHYAKMKSNVCFTSTIEPTSVTEAMKDE 120
           + Y KM +++C+ S IEPTSV  A+KDE
Sbjct: 649 VDYTKMIADLCYVSAIEPTSVENALKDE 676

BLAST of MELO3C005159 vs. NCBI nr
Match: gi|659118728|ref|XP_008459272.1| (PREDICTED: uncharacterized protein LOC103498447 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 8.8e-09
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 1

Query: 66  HVKKNHPVSSAIRDVNSGIMTRKKNRLHYAKMKSNVCFTSTIEPTSVTEAMKDE 120
           H+ KNHP S    D++SGI+TRKK R  YAKM +NVC+TS++EPT+V+  + DE
Sbjct: 207 HIAKNHPSSFINGDIHSGIITRKKERKDYAKMVANVCYTSSLEPTTVSAVLSDE 260

BLAST of MELO3C005159 vs. NCBI nr
Match: gi|659125416|ref|XP_008462676.1| (PREDICTED: uncharacterized protein LOC103500980 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-08
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1

Query: 66  HVKKNHPVSSAIRDVNSGIMTRKKNRLHYAKMKSNVCFTSTIEPTSVTEAMKDE 120
           H+ KNHP    I DV+SGI+TRKK R  YAKM +NVC+TS++EPT++T A+  E
Sbjct: 356 HIAKNHPSIFIIGDVHSGIITRKKERRDYAKMVANVCYTSSLEPTTITVALTYE 409

BLAST of MELO3C005159 vs. NCBI nr
Match: gi|848893855|ref|XP_012846969.1| (PREDICTED: uncharacterized protein LOC105966941 [Erythranthe guttata])

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1

Query: 64   SAHVKKNHPVSSAIRDVNSGIMTRKKNRLHYAKMKSNVCFTSTIEPTSVTEAMKDE 120
            S  VKKNHPV   I  V+ GI TR K +++Y +M   VCFTSTIEP +V EA+ DE
Sbjct: 1016 SRRVKKNHPVDQVIGSVDEGIQTRGKPKVNYKEMARYVCFTSTIEPKNVKEALLDE 1071

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659124383|ref|XP_008462132.1|1.0e-0940.91PREDICTED: uncharacterized protein LOC103500561 [Cucumis melo][more]
gi|659116516|ref|XP_008458108.1|6.7e-0940.91PREDICTED: uncharacterized protein LOC103497638 [Cucumis melo][more]
gi|659118728|ref|XP_008459272.1|8.8e-0955.56PREDICTED: uncharacterized protein LOC103498447 [Cucumis melo][more]
gi|659125416|ref|XP_008462676.1|1.5e-0857.41PREDICTED: uncharacterized protein LOC103500980 [Cucumis melo][more]
gi|848893855|ref|XP_012846969.1|2.2e-0755.36PREDICTED: uncharacterized protein LOC105966941 [Erythranthe guttata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005159T1MELO3C005159T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None