MELO3C005154 (gene) Melon (DHL92) v3.5.1

BLAST of MELO3C005154 vs. Swiss-Prot
Match: NRPE1_ARATH (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 7.1e-230
Identity = 416/687 (60.55%), Postives = 502/687 (73.07%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +L++IP E+RKKL  +G+ PQ+GYIL+YLPVPPNCLSVPE SDG + MS DP+   LK +
Sbjct: 183 ILRRIPEESRKKLTAKGHIPQEGYILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELKDV 242

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LK+V  IK SRSG  NFESH+ EA+++   VD YLQVRGT KA+R ID R+GV+K  +  
Sbjct: 243 LKKVIAIKSSRSGETNFESHKAEASEMFRVVDTYLQVRGTAKAARNIDMRYGVSKISDSS 302

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           S+KAW EKMRTLFIRKGSGFSSRSVITGDAY+ VNE+G+P E+AQRITFEERVSVHN  Y
Sbjct: 303 SSKAWTEKMRTLFIRKGSGFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGY 362

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ+LVD KLCL+Y  GS+ YSLR+GS GHT LKPGQ+VHRR+MDGD+VFINRPPTTHKHS
Sbjct: 363 LQKLVDDKLCLSYTQGSTTYSLRDGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHS 422

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQALRVY+H+D+ VKINPL+C  LSADFDGDC+HLFYPQS++AKAEV+ LFSVEKQLLSS
Sbjct: 423 LQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSS 482

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+G L LQ+ +DSLLSL++M  + FL KA AQQLAM+ S  LPPPAL         WT  
Sbjct: 483 HTGQLILQMGSDSLLSLRVMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVF 542

Query: 361 QILQTKGPE--------------------------------------------EVLKFFD 420
           QILQ   PE                                            E L FFD
Sbjct: 543 QILQLAFPERLSCKGDRFLVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFD 602

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQK-NIQVLSPLLYQLRSTFNELVELQLE 480
           SLQPLLME +F+EGFS+ L+D SM  A +  +    I+ +SP++ +LR ++ +  ELQLE
Sbjct: 603 SLQPLLMESLFAEGFSLSLEDLSMSRADMDVIHNLIIREISPMVSRLRLSYRD--ELQLE 662

Query: 481 NHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIED 540
           N +  VK    NF+LK  S+  L D KS SAI K+VQQ GFLGLQLSDK +FY+K+L+ED
Sbjct: 663 NSIHKVKEVAANFMLKSYSIRNLIDIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVED 722

Query: 541 VASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGT 600
           +A     +Y        S +FG+VKGCFFHGLDPYEEM HSI+ REV+VRSSRGL EPGT
Sbjct: 723 MAIFCKRKYGRIS---SSGDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGT 782

Query: 601 LFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAM 643
           LFKNLMA+LRD+VI  DGTVRN CSNS+IQ +YG+ +       LF  GEPVGVLAATAM
Sbjct: 783 LFKNLMAVLRDIVITNDGTVRNTCSNSVIQFKYGVDSERGH-QGLFEAGEPVGVLAATAM 842

BLAST of MELO3C005154 vs. Swiss-Prot
Match: NRPD1_ARATH (DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana GN=NRPD1 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-31
Identity = 97/297 (32.66%), Postives = 154/297 (51.85%), Query Frame = 1

Query: 77  FESHEVEANDLQLAVDQYLQVRG-TVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIR 136
           FE + +E +   +   QY ++   TV +S+  D+     K+ + P     L  M+ + + 
Sbjct: 259 FEGNTLELSSRVMECMQYSRLFSETVSSSK--DSANPYQKKSDTPKL-CGLRFMKDVLLG 318

Query: 137 KGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHN-----IRYLQELVDKKLC 196
           K S  + R+V+ GD    +NEIG+P  +A+R+   E ++  N       ++  L+D K  
Sbjct: 319 KRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPTLLDNKE- 378

Query: 197 LTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRV-YLH 256
           +  R G    +++        L+ G  + R +MDGD V +NRPP+ H+HSL A+ V  L 
Sbjct: 379 MHVRRGDRLVAIQVND-----LQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIAMTVRILP 438

Query: 257 DDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQL 316
              VV +NP+ C     DFDGDC+H + PQSI AK E+  L +++KQL++  +G   L L
Sbjct: 439 TTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQNGRNLLSL 498

Query: 317 ANDSLLS--LKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSL--HWTALQI 363
             DSL +  L  + +  +L +A  QQL M+    LPPPA++     S    WT +Q+
Sbjct: 499 GQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWTGMQL 546

HSP 2 Score: 73.6 bits (179), Expect = 9.2e-12
Identity = 61/210 (29.05%), Postives = 96/210 (45.71%), Query Frame = 1

Query: 421 QLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQ 480
           Q  +T +EL     ++  R V+     +  + +S   +  + S+  I K+VQ    +GLQ
Sbjct: 691 QKSATLSELAVSAFKDAYRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQ 750

Query: 481 LSDKG------RFYSKSLIEDVASLFHNRYSSDKIDYPS-AEFGLVKGCFFHGLDPYEEM 540
            S         R  + +   D  S        D     S   +G+++  F  GL+P E  
Sbjct: 751 NSAVSLSFGFPRELTCAAWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESF 810

Query: 541 VHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAG 600
           VHS+++R+     +  L  PGTL + LM  +RD+   YDGTVRN   N ++Q  Y    G
Sbjct: 811 VHSVTSRDSSFSGNADL--PGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETD-G 870

Query: 601 MMQPYSLFPPGEPVGVLAATAMSTPAYKAV 624
            ++  +    GE +G L+A A+S  AY A+
Sbjct: 871 PVEDIT----GEALGSLSACALSEAAYSAL 893

BLAST of MELO3C005154 vs. Swiss-Prot
Match: RPB1_SCHPO (DNA-directed RNA polymerase II subunit rpb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpb1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-28
Identity = 113/368 (30.71%), Postives = 170/368 (46.20%), Query Frame = 1

Query: 18  YYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILK-QVEIIKGSRSGAPN 77
           Y   D  I+  LPVPP  +  P IS   T    D     L  I+K    + +  + GAP 
Sbjct: 234 YARPDWMIITVLPVPPPSVR-PSISVDGTSRGEDDLTHKLSDIIKANANVRRCEQEGAPA 293

Query: 78  FESHEVEANDLQLAVDQYL--QVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFI 137
               E E   LQ  V  Y+  ++ G  +A +    + G   +      K    ++R   +
Sbjct: 294 HIVSEYEQL-LQFHVATYMDNEIAGQPQALQ----KSGRPLKSIRARLKGKEGRLRGNLM 353

Query: 138 RKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELV----DKKLC 197
            K   FS+R+VITGD    ++E+GVP  +A+ +T+ E V+ +NI  LQELV    D+   
Sbjct: 354 GKRVDFSARTVITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQELVRNGPDEHPG 413

Query: 198 LTY--RDGSSAYSLR-EGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVY 257
             Y  RD      LR     G   L+ G  V R I DGD+V  NR P+ HK S+   R+ 
Sbjct: 414 AKYIIRDTGERIDLRYHKRAGDIPLRYGWRVERHIRDGDVVIFNRQPSLHKMSMMGHRIR 473

Query: 258 LHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNL 317
           +      ++N  +    +ADFDGD +++  PQS   +AE+  +  V KQ++S  S    +
Sbjct: 474 VMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSEETRAEIQEITMVPKQIVSPQSNKPVM 533

Query: 318 QLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY---LPPPALLGVRSGSLHWTALQIL 372
            +  D+L  + K   R  FL + A   + ++V  +   LPPP +L      + WT  QIL
Sbjct: 534 GIVQDTLAGVRKFSLRDNFLTRNAVMNIMLWVPDWDGILPPPVIL---KPKVLWTGKQIL 592

HSP 2 Score: 62.0 bits (149), Expect = 2.8e-08
Identity = 62/261 (23.75%), Postives = 113/261 (43.30%), Query Frame = 1

Query: 348 LGVRSGSLHWTALQILQTKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQA 407
           +G   G L  T   I + KGPE    FF+ +Q ++   +   GFS+G+ D       ++ 
Sbjct: 628 VGASQGGLVHT---IWKEKGPEICKGFFNGIQRVVNYWLLHNGFSIGIGDTIADADTMKE 687

Query: 408 LQKNIQVLSPLLYQLRSTFNELVELQLENHLR-----SVKVPFTNFILKLSSLGKLFDSK 467
           + + ++       + R    E ++    N L+     +++  F   + ++  L +  D+ 
Sbjct: 688 VTRTVK-------EARRQVAECIQDAQHNRLKPEPGMTLRESFEAKVSRI--LNQARDNA 747

Query: 468 SESA------INKVVQQI--GFLG--LQLSDKGRFYSKSLIEDVASLFHNRYSS----DK 527
             SA       N V Q +  G  G  + +S       + ++E     F  +Y +     K
Sbjct: 748 GRSAEHSLKDSNNVKQMVAAGSKGSFINISQMSACVGQQIVEGKRIPFGFKYRTLPHFPK 807

Query: 528 IDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVV 587
            D      G ++  +  GL P E   H+++ RE ++ ++    E G + + L+  + DV+
Sbjct: 808 DDDSPESRGFIENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKAMEDVM 867

Query: 588 ICYDGTVRNVCSNSIIQLEYG 590
           + YDGTVRN   + IIQ  YG
Sbjct: 868 VRYDGTVRNAMGD-IIQFAYG 875

BLAST of MELO3C005154 vs. Swiss-Prot
Match: NRPB1_ARATH (DNA-directed RNA polymerase II subunit 1 OS=Arabidopsis thaliana GN=NRPB1 PE=1 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-26
Identity = 110/371 (29.65%), Postives = 166/371 (44.74%), Query Frame = 1

Query: 22  DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGS-RSGAPNFESH 81
           D  IL+ LP+PP  +  P +    T  S D     L  I++  E +K   ++GAP     
Sbjct: 243 DWMILEVLPIPPPPVR-PSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHIIS 302

Query: 82  EVEANDLQLAVDQYL------QVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFI 141
           E     LQ  +  Y       Q R T K+ R I +             KA   ++R   +
Sbjct: 303 EF-TQLLQFHIATYFDNELPGQPRATQKSGRPIKSICS--------RLKAKEGRIRGNLM 362

Query: 142 RKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVD-------K 201
            K   FS+R+VIT D    ++E+GVP+ +A  +T+ E V+ +NI  L+ELVD        
Sbjct: 363 GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPG 422

Query: 202 KLCLTY--RDGSSAYSLRE-GSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQAL 261
           K    Y  RD      LR        +L+ G  V R + DGD V  NR P+ HK S+   
Sbjct: 423 KTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGH 482

Query: 262 RVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGN 321
           R+ +      ++N  +    +ADFDGD +++  PQS   +AEVL L  V K ++S  +  
Sbjct: 483 RIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 542

Query: 322 LNLQLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY---LPPPALLGVRSGSLHWTAL 372
             + +  D+LL   K+  R  F+ K       M+   +   +P PA+L  R     WT  
Sbjct: 543 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRP---LWTGK 600

HSP 2 Score: 60.1 bits (144), Expect = 1.1e-07
Identity = 60/259 (23.17%), Postives = 107/259 (41.31%), Query Frame = 1

Query: 348 LGVRSGSLHWTALQILQTKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQA 407
           LG  +GSL      I +  GP+   KF    Q L+   +   GF++G+ D     + ++ 
Sbjct: 641 LGTSNGSLVHV---IWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEK 700

Query: 408 LQKNIQ----VLSPLLYQ-------------LRSTFNELVELQLENHLRSVKVPFTNFIL 467
           + + I      +  L+ Q             +R TF   V   L              + 
Sbjct: 701 INETISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLA 760

Query: 468 KLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKID 527
           + ++L  +  + S+ +   + Q    +G Q  +  R        D  +L H  ++ D  D
Sbjct: 761 ETNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI---PFGFDGRTLPH--FTKD--D 820

Query: 528 YPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVIC 587
           Y     G V+  +  GL P E   H++  RE ++ ++   +E G + + L+  + D+++ 
Sbjct: 821 YGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVK 880

Query: 588 YDGTVRNVCSNSIIQLEYG 590
           YDGTVRN   + +IQ  YG
Sbjct: 881 YDGTVRNSLGD-VIQFLYG 888

BLAST of MELO3C005154 vs. Swiss-Prot
Match: RPB1B_TRYBB (DNA-directed RNA polymerase II subunit RPB1-B OS=Trypanosoma brucei brucei GN=TRP5.9 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 6.6e-26
Identity = 105/367 (28.61%), Postives = 172/367 (46.87%), Query Frame = 1

Query: 19  YPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFE 78
           +P+D  +L  LPVPP  +  P IS G  + S D     +  I+K+            N +
Sbjct: 240 HPRD-LVLTVLPVPPPQVR-PAISFG-GLRSDDELTHQIMSIVKR------------NNQ 299

Query: 79  SHEVEANDLQLAVDQYLQVRGTVKAS--RGIDARFGVNKELNDPSTKAWLEKMRTLFIR- 138
               + +D+Q A+D+   +     A+        +   K  +    K+  E+++  + R 
Sbjct: 300 LRRDKESDVQAAIDRSRALLQEHVATYFNNASTYYKPTKVNDTKKLKSLTERLKGKYGRL 359

Query: 139 ------KGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKL 198
                 K   FS+R+VITGD    V+E+GVPF VA  +TF ERV+  N + L E   + +
Sbjct: 360 RGNLMGKRVDFSARTVITGDPNIDVDEVGVPFSVAMTLTFPERVNTINKKRLTEFARRTV 419

Query: 199 C-----LTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQAL 258
                 + + +G+              L  G +V R +++GD+V  NR PT H+ S+   
Sbjct: 420 YPSANYIHHPNGTITKLALLRDRSKVTLNIGDVVERHVINGDVVLFNRQPTLHRMSMMGH 479

Query: 259 RVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGN 318
           RV + + +  ++N       +ADFDGD ++L  PQS+  KAE++ +  V K  +S +   
Sbjct: 480 RVRVLNYNTFRLNLSCTTPYNADFDGDEMNLHVPQSLLTKAELIEMMMVPKNFVSPNKSA 539

Query: 319 LNLQLANDSLL-SLKMMFRKYFLGKAAAQQLAMFVSSY-LPPPALLGVRSGSLHWTALQI 370
             + +  DSLL S ++  +  FL K   Q +A+++  + LP PA+L  R     WT  Q+
Sbjct: 540 PCMGIVQDSLLGSYRLTDKDTFLDKYFVQSVALWLDLWQLPIPAILKPRP---LWTGKQV 588

BLAST of MELO3C005154 vs. TrEMBL
Match: A0A0B0MEI7_GOSAR (DNA-directed RNA polymerase subunit OS=Gossypium arboreum GN=F383_17723 PE=3 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 8.9e-280
Identity = 491/686 (71.57%), Postives = 565/686 (82.36%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP +TR+KL+G+G++PQ+GYILQYLPVPPNCLSVP++SDG++VMSSD + SML+K+
Sbjct: 183 ILKRIPAQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGISVMSSDLSTSMLRKV 242

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+GVNK+ +D 
Sbjct: 243 LKQVEIIKSSRSGNPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKDASDS 302

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSRSVITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 303 STKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 362

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDG S YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 363 LQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 422

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS++AKAEV  LFSVEKQLLSS
Sbjct: 423 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQLLSS 482

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           HSGNLNLQLA DSLLSL++M + +   KA AQQL+MF+SS LP PA L     +  WTA 
Sbjct: 483 HSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKGNHVAPCWTAF 542

Query: 361 QILQT--------------------------------------------KGPEEVLKFFD 420
           QILQT                                            KGP+EVL FFD
Sbjct: 543 QILQTAFPACLDCSCDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVLNFFD 602

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME+IF+EGF+V L+D+S+    ++ +QK+IQV+SPLLYQLRST+NELVELQ+EN
Sbjct: 603 SLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVELQMEN 662

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  +FILK SSLG L DS+S+SA+NKVVQQIGFLG+QLSDKG+FYSK+L+EDV
Sbjct: 663 HIRVAKAPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTLVEDV 722

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD IDYPSAEFGL+K CFF GLDPYE +VHSISTREVMVRS+RGL+EPGTL
Sbjct: 723 AHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSEPGTL 782

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRNV SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 783 FKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA---RTRPQFPAGEPVGVLAATAMS 842

BLAST of MELO3C005154 vs. TrEMBL
Match: A0A061FRW1_THECC (DNA-directed RNA polymerase subunit OS=Theobroma cacao GN=TCM_045152 PE=3 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 2.7e-276
Identity = 488/686 (71.14%), Postives = 558/686 (81.34%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP ETR+KL+G+G++PQ+GYIL+YLPVPPNCLSVP+ISDGV++MSSD + +MLKK+
Sbjct: 184 ILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+G++K+ +D 
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSR VITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 304 STKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 363

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDGSS YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 364 LQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 423

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEV  LFSVEKQLLSS
Sbjct: 424 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSS 483

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+GNLNLQLA DSLLSL++M +     KA AQQL+MF+SS LP PA L   S    WTAL
Sbjct: 484 HNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTAL 543

Query: 361 QILQTKGPEE--------------------------------------------VLKFFD 420
           QILQT  P                                              VL FFD
Sbjct: 544 QILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFD 603

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F+EGFSV L+D+S+    +Q +QK+IQ +SPLLYQLRST+NELV LQ+EN
Sbjct: 604 SLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMEN 663

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  NFIL  S+LG L DSKS+S +NKVVQQIGFLGLQLS+KG+FYSK+L+EDV
Sbjct: 664 HIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDV 723

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD +DYPSAEFGL+K CFFHGLDPYE MVHSISTREV+VRSSRGL+EPGTL
Sbjct: 724 AYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTL 783

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRN+ SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 784 FKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA---RTKPQFPAGEPVGVLAATAMS 843

BLAST of MELO3C005154 vs. TrEMBL
Match: A0A061FR78_THECC (DNA-directed RNA polymerase subunit OS=Theobroma cacao GN=TCM_045152 PE=3 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 2.7e-276
Identity = 488/686 (71.14%), Postives = 558/686 (81.34%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP ETR+KL+G+G++PQ+GYIL+YLPVPPNCLSVP+ISDGV++MSSD + +MLKK+
Sbjct: 184 ILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+G++K+ +D 
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSR VITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 304 STKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 363

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDGSS YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 364 LQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 423

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEV  LFSVEKQLLSS
Sbjct: 424 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSS 483

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+GNLNLQLA DSLLSL++M +     KA AQQL+MF+SS LP PA L   S    WTAL
Sbjct: 484 HNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTAL 543

Query: 361 QILQTKGPEE--------------------------------------------VLKFFD 420
           QILQT  P                                              VL FFD
Sbjct: 544 QILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFD 603

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F+EGFSV L+D+S+    +Q +QK+IQ +SPLLYQLRST+NELV LQ+EN
Sbjct: 604 SLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMEN 663

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  NFIL  S+LG L DSKS+S +NKVVQQIGFLGLQLS+KG+FYSK+L+EDV
Sbjct: 664 HIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDV 723

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD +DYPSAEFGL+K CFFHGLDPYE MVHSISTREV+VRSSRGL+EPGTL
Sbjct: 724 AYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTL 783

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRN+ SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 784 FKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA---RTKPQFPAGEPVGVLAATAMS 843

BLAST of MELO3C005154 vs. TrEMBL
Match: A0A067EI70_CITSI (DNA-directed RNA polymerase subunit (Fragment) OS=Citrus sinensis GN=CISIN_1g0002911mg PE=3 SV=1)

HSP 1 Score: 946.8 bits (2446), Expect = 1.4e-272
Identity = 489/686 (71.28%), Postives = 561/686 (81.78%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           MLK+IP ETRKKLAG+GY+PQDGYIL+YLPVPPNCLSVP+ISDGV+ MSSD +++MLKK+
Sbjct: 120 MLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKV 179

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEII+ SRSG PNFES EVE+NDLQLAV QYL+VRGT K+SR +DARFGV+++ N  
Sbjct: 180 LKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNS- 239

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           +TKAWLEKMRTLFIRKGSGFSSRSVITGDAYK VNEIGVPFE+AQRITFEERV+VHNI Y
Sbjct: 240 TTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINY 299

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQELVD KLCLTY DGSS+YSLREGS GHT+L+PGQ+VHRRIMDGD VFINRPPTTHKHS
Sbjct: 300 LQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHS 359

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEVL LFSVEKQLLSS
Sbjct: 360 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSS 419

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+GNLNLQLA D+LLSLK+MF+KYFL KA  QQLAMF  S LP PAL   R  S  WTAL
Sbjct: 420 HNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARC-SARWTAL 479

Query: 361 QILQTKGP--------------EEVLK------------------------------FFD 420
           QILQ+  P               EVLK                              FFD
Sbjct: 480 QILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFD 539

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F++GFSV L+D+S+  A L  +QK IQ L  LLY   ST NELV+LQ+EN
Sbjct: 540 SLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIEN 599

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R VK+    FILK S+LG L DSKS+SA++KVVQQ GFLGLQLSD+G+FYSK+L+ED+
Sbjct: 600 HIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDI 659

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           AS F   Y  D ++YP+A++GL+KGCFFHGLDPYEEM HSISTREV+VRSSRGL+EPGTL
Sbjct: 660 ASHFERIYPMD-LNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTL 719

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMA+LRDVVICYDGTVRNVCSNSIIQ +Y + A   + +SLFP GEPVGVLAATAMS
Sbjct: 720 FKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA--RKSHSLFPAGEPVGVLAATAMS 779

BLAST of MELO3C005154 vs. TrEMBL
Match: V4RIT9_9ROSI (DNA-directed RNA polymerase subunit OS=Citrus clementina GN=CICLE_v10004129mg PE=3 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 1.5e-271
Identity = 485/686 (70.70%), Postives = 560/686 (81.63%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           MLK+IP ETRKKLAG+GY+PQDGYIL+YLPVPPNCLSVP+ISDGV+ MSSD +++MLKK+
Sbjct: 186 MLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKV 245

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEII+ SRSG PNFES EVE+NDLQLAV QYL+VRGT K+SR +DARFGV+++ N  
Sbjct: 246 LKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNS- 305

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           +TKAWLEKMRTLFIRKGSGFSSRSVITGDAYK VNEIGVPFE+AQRITFEERV+VHNI Y
Sbjct: 306 TTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINY 365

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQELVD KLCLTY DGSS+YSLREGS GHT+L+PGQ+VHRRIMDGD VFINRPPTTHKHS
Sbjct: 366 LQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHS 425

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEVL LFSVEKQLLSS
Sbjct: 426 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSS 485

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLG----------- 360
           H+GNLNLQLA D+LLSLK+MF+KYFL KA AQQLAMF  S LP PAL             
Sbjct: 486 HNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTAL 545

Query: 361 ------------------------VRSGS---------LHWTALQILQTKGPEEVLKFFD 420
                                   V +G          ++     I   KGPEEVL+FFD
Sbjct: 546 QILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFD 605

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F++GFSV L+D+S+  A L  +QK IQ L  LLY   ST NELV+LQ+EN
Sbjct: 606 SLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIEN 665

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R VK+    FILK S+LG L DSKS+SA++KVVQQ GFLGLQLSD+G+FYSK+L+ED+
Sbjct: 666 HIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDI 725

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           AS F   Y  D ++YP+A++GL+KGCFFHGLDPYEEM HSISTREV+VRSSRGL+EPGTL
Sbjct: 726 ASHFERIYPMD-LNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTL 785

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMA+LRDVVICYDGTVRNVCSNSIIQ +Y + A   + +SLFP GEPVGVLAATAMS
Sbjct: 786 FKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA--RKSHSLFPAGEPVGVLAATAMS 845

BLAST of MELO3C005154 vs. TAIR10
Match: AT2G40030.1 (AT2G40030.1 nuclear RNA polymerase D1B)

HSP 1 Score: 798.1 bits (2060), Expect = 4.0e-231
Identity = 416/687 (60.55%), Postives = 502/687 (73.07%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +L++IP E+RKKL  +G+ PQ+GYIL+YLPVPPNCLSVPE SDG + MS DP+   LK +
Sbjct: 183 ILRRIPEESRKKLTAKGHIPQEGYILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELKDV 242

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LK+V  IK SRSG  NFESH+ EA+++   VD YLQVRGT KA+R ID R+GV+K  +  
Sbjct: 243 LKKVIAIKSSRSGETNFESHKAEASEMFRVVDTYLQVRGTAKAARNIDMRYGVSKISDSS 302

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           S+KAW EKMRTLFIRKGSGFSSRSVITGDAY+ VNE+G+P E+AQRITFEERVSVHN  Y
Sbjct: 303 SSKAWTEKMRTLFIRKGSGFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGY 362

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ+LVD KLCL+Y  GS+ YSLR+GS GHT LKPGQ+VHRR+MDGD+VFINRPPTTHKHS
Sbjct: 363 LQKLVDDKLCLSYTQGSTTYSLRDGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHS 422

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQALRVY+H+D+ VKINPL+C  LSADFDGDC+HLFYPQS++AKAEV+ LFSVEKQLLSS
Sbjct: 423 LQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSS 482

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+G L LQ+ +DSLLSL++M  + FL KA AQQLAM+ S  LPPPAL         WT  
Sbjct: 483 HTGQLILQMGSDSLLSLRVMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVF 542

Query: 361 QILQTKGPE--------------------------------------------EVLKFFD 420
           QILQ   PE                                            E L FFD
Sbjct: 543 QILQLAFPERLSCKGDRFLVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFD 602

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQK-NIQVLSPLLYQLRSTFNELVELQLE 480
           SLQPLLME +F+EGFS+ L+D SM  A +  +    I+ +SP++ +LR ++ +  ELQLE
Sbjct: 603 SLQPLLMESLFAEGFSLSLEDLSMSRADMDVIHNLIIREISPMVSRLRLSYRD--ELQLE 662

Query: 481 NHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIED 540
           N +  VK    NF+LK  S+  L D KS SAI K+VQQ GFLGLQLSDK +FY+K+L+ED
Sbjct: 663 NSIHKVKEVAANFMLKSYSIRNLIDIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVED 722

Query: 541 VASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGT 600
           +A     +Y        S +FG+VKGCFFHGLDPYEEM HSI+ REV+VRSSRGL EPGT
Sbjct: 723 MAIFCKRKYGRIS---SSGDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGT 782

Query: 601 LFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAM 643
           LFKNLMA+LRD+VI  DGTVRN CSNS+IQ +YG+ +       LF  GEPVGVLAATAM
Sbjct: 783 LFKNLMAVLRDIVITNDGTVRNTCSNSVIQFKYGVDSERGH-QGLFEAGEPVGVLAATAM 842

BLAST of MELO3C005154 vs. TAIR10
Match: AT1G63020.1 (AT1G63020.1 nuclear RNA polymerase D1A)

HSP 1 Score: 139.4 bits (350), Expect = 7.7e-33
Identity = 97/297 (32.66%), Postives = 154/297 (51.85%), Query Frame = 1

Query: 77  FESHEVEANDLQLAVDQYLQVRG-TVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIR 136
           FE + +E +   +   QY ++   TV +S+  D+     K+ + P     L  M+ + + 
Sbjct: 259 FEGNTLELSSRVMECMQYSRLFSETVSSSK--DSANPYQKKSDTPKL-CGLRFMKDVLLG 318

Query: 137 KGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHN-----IRYLQELVDKKLC 196
           K S  + R+V+ GD    +NEIG+P  +A+R+   E ++  N       ++  L+D K  
Sbjct: 319 KRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPTLLDNKE- 378

Query: 197 LTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRV-YLH 256
           +  R G    +++        L+ G  + R +MDGD V +NRPP+ H+HSL A+ V  L 
Sbjct: 379 MHVRRGDRLVAIQVND-----LQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIAMTVRILP 438

Query: 257 DDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQL 316
              VV +NP+ C     DFDGDC+H + PQSI AK E+  L +++KQL++  +G   L L
Sbjct: 439 TTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQNGRNLLSL 498

Query: 317 ANDSLLS--LKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSL--HWTALQI 363
             DSL +  L  + +  +L +A  QQL M+    LPPPA++     S    WT +Q+
Sbjct: 499 GQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWTGMQL 546

HSP 2 Score: 73.6 bits (179), Expect = 5.2e-13
Identity = 61/210 (29.05%), Postives = 96/210 (45.71%), Query Frame = 1

Query: 421 QLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQ 480
           Q  +T +EL     ++  R V+     +  + +S   +  + S+  I K+VQ    +GLQ
Sbjct: 691 QKSATLSELAVSAFKDAYRDVQALAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQ 750

Query: 481 LSDKG------RFYSKSLIEDVASLFHNRYSSDKIDYPS-AEFGLVKGCFFHGLDPYEEM 540
            S         R  + +   D  S        D     S   +G+++  F  GL+P E  
Sbjct: 751 NSAVSLSFGFPRELTCAAWNDPNSPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESF 810

Query: 541 VHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAG 600
           VHS+++R+     +  L  PGTL + LM  +RD+   YDGTVRN   N ++Q  Y    G
Sbjct: 811 VHSVTSRDSSFSGNADL--PGTLSRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETD-G 870

Query: 601 MMQPYSLFPPGEPVGVLAATAMSTPAYKAV 624
            ++  +    GE +G L+A A+S  AY A+
Sbjct: 871 PVEDIT----GEALGSLSACALSEAAYSAL 893

BLAST of MELO3C005154 vs. TAIR10
Match: AT4G35800.1 (AT4G35800.1 RNA polymerase II large subunit)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-27
Identity = 110/371 (29.65%), Postives = 166/371 (44.74%), Query Frame = 1

Query: 22  DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGS-RSGAPNFESH 81
           D  IL+ LP+PP  +  P +    T  S D     L  I++  E +K   ++GAP     
Sbjct: 243 DWMILEVLPIPPPPVR-PSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHIIS 302

Query: 82  EVEANDLQLAVDQYL------QVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFI 141
           E     LQ  +  Y       Q R T K+ R I +             KA   ++R   +
Sbjct: 303 EF-TQLLQFHIATYFDNELPGQPRATQKSGRPIKSICS--------RLKAKEGRIRGNLM 362

Query: 142 RKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVD-------K 201
            K   FS+R+VIT D    ++E+GVP+ +A  +T+ E V+ +NI  L+ELVD        
Sbjct: 363 GKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPG 422

Query: 202 KLCLTY--RDGSSAYSLRE-GSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQAL 261
           K    Y  RD      LR        +L+ G  V R + DGD V  NR P+ HK S+   
Sbjct: 423 KTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGH 482

Query: 262 RVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGN 321
           R+ +      ++N  +    +ADFDGD +++  PQS   +AEVL L  V K ++S  +  
Sbjct: 483 RIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 542

Query: 322 LNLQLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY---LPPPALLGVRSGSLHWTAL 372
             + +  D+LL   K+  R  F+ K       M+   +   +P PA+L  R     WT  
Sbjct: 543 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRP---LWTGK 600

HSP 2 Score: 60.1 bits (144), Expect = 5.9e-09
Identity = 60/259 (23.17%), Postives = 107/259 (41.31%), Query Frame = 1

Query: 348 LGVRSGSLHWTALQILQTKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQA 407
           LG  +GSL      I +  GP+   KF    Q L+   +   GF++G+ D     + ++ 
Sbjct: 641 LGTSNGSLVHV---IWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEK 700

Query: 408 LQKNIQ----VLSPLLYQ-------------LRSTFNELVELQLENHLRSVKVPFTNFIL 467
           + + I      +  L+ Q             +R TF   V   L              + 
Sbjct: 701 INETISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLA 760

Query: 468 KLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKID 527
           + ++L  +  + S+ +   + Q    +G Q  +  R        D  +L H  ++ D  D
Sbjct: 761 ETNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI---PFGFDGRTLPH--FTKD--D 820

Query: 528 YPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVIC 587
           Y     G V+  +  GL P E   H++  RE ++ ++   +E G + + L+  + D+++ 
Sbjct: 821 YGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVK 880

Query: 588 YDGTVRNVCSNSIIQLEYG 590
           YDGTVRN   + +IQ  YG
Sbjct: 881 YDGTVRNSLGD-VIQFLYG 888

BLAST of MELO3C005154 vs. TAIR10
Match: AT5G60040.2 (AT5G60040.2 nuclear RNA polymerase C1)

HSP 1 Score: 96.7 bits (239), Expect = 5.7e-20
Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 1

Query: 140 FSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDK-------KLCLT 199
           F+ R+VI+ D    + E+G+P  +AQ +TF E VS HNI  L++ V            + 
Sbjct: 374 FTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 433

Query: 200 YRDGSSAYSLREGSMGHT-YLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDD 259
           Y DGSS   + +        L  G IV R + +GD+V  NR P+ H+ S+   R  +   
Sbjct: 434 YPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW 493

Query: 260 HVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLAN 319
             ++ N  +C   +ADFDGD +++  PQ+  A+ E + L  V+  L +  +G + +    
Sbjct: 494 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 553

Query: 320 DSLLSLKMMFRK-YFLGKAAAQQLAMFV-----SSYLPPPALL 349
           D L S  ++ RK  F  +AA   +  ++     S  LP P +L
Sbjct: 554 DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTIL 596

HSP 2 Score: 47.0 bits (110), Expect = 5.2e-05
Identity = 28/78 (35.90%), Postives = 40/78 (51.28%), Query Frame = 1

Query: 512 PSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICY 571
           P+A+ G V   F+ GL   E   H++  RE +V ++      G + + LM  L D+++ Y
Sbjct: 846 PAAK-GFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHY 905

Query: 572 DGTVRNVCSNSIIQLEYG 590
           D TVRN  S  I+Q  YG
Sbjct: 906 DNTVRN-ASGCILQFTYG 921

BLAST of MELO3C005154 vs. TAIR10
Match: AT3G57660.1 (AT3G57660.1 nuclear RNA polymerase A1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-18
Identity = 73/241 (30.29%), Postives = 109/241 (45.23%), Query Frame = 1

Query: 126 LEKMRTLFIRKGSG----FSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYL 185
           LEK   LF +K  G     + RSVI+ D Y  VN+IG+P   A ++T+ ERV+  N+  L
Sbjct: 430 LEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEKL 489

Query: 186 QELVDKKLCLT-----YRDGSSAYSLREGSMGHTYLK---------------------PG 245
           +E +     +      Y D SS   L         +                       G
Sbjct: 490 REAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELGKTCDINFEG 549

Query: 246 QIVHRRIMDGDIVFINRPPTTHKHSLQALRV-YLHDDHVVKINPLICGSLSADFDGDCIH 305
           + VHR + DGDIV +NR PT HK SL A +V  L  +  ++++   C + +ADFDGD ++
Sbjct: 550 KTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNADFDGDEMN 609

Query: 306 LFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMF-RKYFLGKAAAQQ 335
           + +PQ   ++AE   + +   Q     +G     L  D ++S  ++  R  FL K    Q
Sbjct: 610 VHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFLDKDHFNQ 669

HSP 2 Score: 30.8 bits (68), Expect = 3.9e+00
Identity = 14/28 (50.00%), Postives = 18/28 (64.29%), Query Frame = 1

Query: 599  SLFPPGEPVGVLAATAMSTPAYKAVLDS 627
            SL  PGEPVGVLAA ++  P+ +  L++
Sbjct: 1150 SLAQPGEPVGVLAAQSVGEPSTQMTLNT 1177

BLAST of MELO3C005154 vs. NCBI nr
Match: gi|659072501|ref|XP_008465860.1| (PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo])

HSP 1 Score: 1228.4 bits (3177), Expect = 0.0e+00
Identity = 634/686 (92.42%), Postives = 636/686 (92.71%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI
Sbjct: 187 MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 246

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP
Sbjct: 247 LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 306

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY
Sbjct: 307 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 366

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS
Sbjct: 367 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 426

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS
Sbjct: 427 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 486

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL
Sbjct: 487 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 546

Query: 361 QILQTKGPEEV--------------------------------------------LKFFD 420
           QILQT  P                                               LKFFD
Sbjct: 547 QILQTVLPACFDCHGDSYLIKNSNFLKFDFDKDAMPSLINEILTSIFFQKGPEEVLKFFD 606

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN
Sbjct: 607 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 666

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV
Sbjct: 667 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 726

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL
Sbjct: 727 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 786

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS
Sbjct: 787 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 846

BLAST of MELO3C005154 vs. NCBI nr
Match: gi|778702720|ref|XP_011655250.1| (PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus])

HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 632/686 (92.13%), Postives = 636/686 (92.71%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI
Sbjct: 187 MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 246

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP
Sbjct: 247 LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 306

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY
Sbjct: 307 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 366

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS
Sbjct: 367 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 426

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQALRVYLHDDHVVKINPLICG LSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS
Sbjct: 427 LQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 486

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL
Sbjct: 487 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 546

Query: 361 QILQT--------KGPEEVLK------------------------------------FFD 420
           QILQT         G   ++K                                    FFD
Sbjct: 547 QILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFD 606

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN
Sbjct: 607 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 666

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV
Sbjct: 667 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 726

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL
Sbjct: 727 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 786

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS
Sbjct: 787 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 846

BLAST of MELO3C005154 vs. NCBI nr
Match: gi|728811971|gb|KHG00588.1| (DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium arboreum])

HSP 1 Score: 970.7 bits (2508), Expect = 1.3e-279
Identity = 491/686 (71.57%), Postives = 565/686 (82.36%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP +TR+KL+G+G++PQ+GYILQYLPVPPNCLSVP++SDG++VMSSD + SML+K+
Sbjct: 183 ILKRIPAQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGISVMSSDLSTSMLRKV 242

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+GVNK+ +D 
Sbjct: 243 LKQVEIIKSSRSGNPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNKDASDS 302

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSRSVITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 303 STKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 362

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDG S YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 363 LQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 422

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS++AKAEV  LFSVEKQLLSS
Sbjct: 423 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEKQLLSS 482

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           HSGNLNLQLA DSLLSL++M + +   KA AQQL+MF+SS LP PA L     +  WTA 
Sbjct: 483 HSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKGNHVAPCWTAF 542

Query: 361 QILQT--------------------------------------------KGPEEVLKFFD 420
           QILQT                                            KGP+EVL FFD
Sbjct: 543 QILQTAFPACLDCSCDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEVLNFFD 602

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME+IF+EGF+V L+D+S+    ++ +QK+IQV+SPLLYQLRST+NELVELQ+EN
Sbjct: 603 SLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVELQMEN 662

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  +FILK SSLG L DS+S+SA+NKVVQQIGFLG+QLSDKG+FYSK+L+EDV
Sbjct: 663 HIRVAKAPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKTLVEDV 722

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD IDYPSAEFGL+K CFF GLDPYE +VHSISTREVMVRS+RGL+EPGTL
Sbjct: 723 AHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLSEPGTL 782

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRNV SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 783 FKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA---RTRPQFPAGEPVGVLAATAMS 842

BLAST of MELO3C005154 vs. NCBI nr
Match: gi|590569192|ref|XP_007011001.1| (DNA-directed RNA polymerase E subunit 1, putative isoform 3 [Theobroma cacao])

HSP 1 Score: 959.1 bits (2478), Expect = 3.8e-276
Identity = 488/686 (71.14%), Postives = 558/686 (81.34%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP ETR+KL+G+G++PQ+GYIL+YLPVPPNCLSVP+ISDGV++MSSD + +MLKK+
Sbjct: 184 ILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+G++K+ +D 
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSR VITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 304 STKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 363

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDGSS YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 364 LQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 423

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEV  LFSVEKQLLSS
Sbjct: 424 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSS 483

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+GNLNLQLA DSLLSL++M +     KA AQQL+MF+SS LP PA L   S    WTAL
Sbjct: 484 HNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTAL 543

Query: 361 QILQTKGPEE--------------------------------------------VLKFFD 420
           QILQT  P                                              VL FFD
Sbjct: 544 QILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFD 603

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F+EGFSV L+D+S+    +Q +QK+IQ +SPLLYQLRST+NELV LQ+EN
Sbjct: 604 SLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMEN 663

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  NFIL  S+LG L DSKS+S +NKVVQQIGFLGLQLS+KG+FYSK+L+EDV
Sbjct: 664 HIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDV 723

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD +DYPSAEFGL+K CFFHGLDPYE MVHSISTREV+VRSSRGL+EPGTL
Sbjct: 724 AYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTL 783

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRN+ SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 784 FKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA---RTKPQFPAGEPVGVLAATAMS 843

BLAST of MELO3C005154 vs. NCBI nr
Match: gi|590569186|ref|XP_007010999.1| (DNA-directed RNA polymerase E subunit 1, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 959.1 bits (2478), Expect = 3.8e-276
Identity = 488/686 (71.14%), Postives = 558/686 (81.34%), Query Frame = 1

Query: 1   MLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 60
           +LK+IP ETR+KL+G+G++PQ+GYIL+YLPVPPNCLSVP+ISDGV++MSSD + +MLKK+
Sbjct: 184 ILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKV 243

Query: 61  LKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDP 120
           LKQVEIIK SRSG PNFESHEVEANDLQ AV+QYLQVRGTVKASR IDAR+G++K+ +D 
Sbjct: 244 LKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDS 303

Query: 121 STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRY 180
           STKAWLEKMRTLFIRKGSGFSSR VITGD YK VNEIG+P E+AQRITFEERV++HN+RY
Sbjct: 304 STKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRY 363

Query: 181 LQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHS 240
           LQ LVD KLCLTYRDGSS YSLREGS GHT+L+PGQ+VHRRIMDGDIVFINRPPTTHKHS
Sbjct: 364 LQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHS 423

Query: 241 LQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSS 300
           LQAL VY+HDDH VKINPLICG LSADFDGDCIHLFYPQS+AAKAEV  LFSVEKQLLSS
Sbjct: 424 LQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSS 483

Query: 301 HSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTAL 360
           H+GNLNLQLA DSLLSL++M +     KA AQQL+MF+SS LP PA L   S    WTAL
Sbjct: 484 HNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTAL 543

Query: 361 QILQTKGPEE--------------------------------------------VLKFFD 420
           QILQT  P                                              VL FFD
Sbjct: 544 QILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFD 603

Query: 421 SLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLEN 480
           SLQPLLME++F+EGFSV L+D+S+    +Q +QK+IQ +SPLLYQLRST+NELV LQ+EN
Sbjct: 604 SLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMEN 663

Query: 481 HLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDV 540
           H+R  K P  NFIL  S+LG L DSKS+S +NKVVQQIGFLGLQLS+KG+FYSK+L+EDV
Sbjct: 664 HIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDV 723

Query: 541 ASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 600
           A  F + Y SD +DYPSAEFGL+K CFFHGLDPYE MVHSISTREV+VRSSRGL+EPGTL
Sbjct: 724 AYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTL 783

Query: 601 FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMS 643
           FKNLMAILRDVVICYDGTVRN+ SNSIIQ +YG+ A   +    FP GEPVGVLAATAMS
Sbjct: 784 FKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA---RTKPQFPAGEPVGVLAATAMS 843