MELO3C005104 (gene) Melon (DHL92) v3.5.1

NameMELO3C005104
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNADH-quinone oxidoreductase subunit I
Locationchr9 : 16047238 .. 16048909 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTATTGAAGTCATCTGCTAAGAAGGGCTTCGCAATTGTGGTTCTTCTTGGCCAACTTGGGAGGTAGGCCAGTGCAACTCTCTGTTATTAAAAATCCTTGTGTAATTTGTAGTGCTTAATCTTCTTCTGAATAACAAATACGTAGAGATTAAACTTGTGCAGCCAAAGAGAGCTTATTACCAAGTATGATGGGAATTGAAATGTCCGTCAATACGTTGATGATAAATATCTGTAACTTGGAGGTTCGACTTTGATATTAAAAATTAATAGGCACCTCCAATATCTTTTATAAAACACATAAAACATTACAAATTATCATCTATTTATCTCAATATAAATACGAATATTAGTAATAACATTGACAACTTAGTTTGGAAGTAAAAAAAAAAAAACTAAATTATTAATTTAACTAGTTCTTATAAATTTGTTTACATATAGAAATCTCTGTTGATATCAATATTTTATCGATTTATCCATATAATTGAAATCTCGATATTAATAAAGCAAGGAGGAAAACACTATCTTGACCAGAGCCACATTTCATAAACATTTCAAAGATTCAGTTCATTTGGTGCTATTGCAAACATATATAGGGTTCTTTTTTGAATCTTGATATCAATATGGATATCAAGATTTCTCTCTTTGACTCGTTTTCTTTTTTGAATTTTGATGAATCCAAGAGAAAAAACAGCCGTTGACCCATGTCTATAATGATATCTTTGACGCTCTCTTAATGTCTCATTTATGTACAGCTTCTTGAGACTTGACACATCCAATCATGGAACTTTGTTGTTGTCTGGGTTATTTCTGTATTTTATTTCCTTCTTTTGCTATTTGAAATGCACCGACTTATAGATGCACAATTATCCCATAGAGAATGCACGAACAGTTTCACTGTTTACTCAAGCAGGAATTGGAATGTAAATAATTTAAATTGTGACCAGTCATCTAACTTTTAATTTATAACTGCAGGTTAGGCGTAGATGCTGGAGGCTTTGACGATGGAGGAGTTAAGATCTTGAGATTTAATCTATCAGCATTTCTTTGCTTGGAAACTACCATTAAATCAGGTCTCTGTGTTCAAATTGCTACGGTTTCTGCCTTGGTAGGCCTTCTCCCTTTTGATTTTGAAACTATTGTTCAAGATAAAGTAAGCTATCTAGCCTCTTCGAGTCACTATGCTGAGATTAACTTAATAAAGACGTGGTTTTCTTTATTAAGTCCGAAACAGAAGGAGTTTTCACGTAACATTTTACAAGTTGGTGTTTGCAATGTAAGCTGATATATATTTGATATTTCCTTTCTTGATGCAACTTTAACCCAACTGAAGTTTCGACCTGTTTTCTGAGGCATGGACAAGAGTTTATCACTACCAATTTTTGAAGACTCACATGTGTATACTTAGGAAATTGAAGATTTGTACATATCTATAGCCTAATCTATTTTTCTTCCACACTTTAAAGAGGGGAGGATACACAGTTTTATGTATTGTTTTTATTGAGTACATTAATAAATTCAATGAAATCAAAATTTGTACATTATCCCATTAACTTCCAGTGTCATCTACTCCGTTCGTTTCCTAGAATTTTGCTTGGCTTTTATGTCAAAGCTGTTTTAAGTCTTGGCACAATTCTATTTGATGTTTGACCTCCAACAATAAAGGTATA

mRNA sequence

ATGGATTTATTGAAGTCATCTGCTAAGAAGGGCTTCGCAATTGTGGTTCTTCTTGGCCAACTTGGGAGGTTAGGCGTAGATGCTGGAGGCTTTGACGATGGAGGAGTTAAGATCTTGAGATTTAATCTATCAGCATTTCTTTGCTTGGAAACTACCATTAAATCAGGTCTCTGTGTTCAAATTGCTACGGTTTCTGCCTTGGTAGGCCTTCTCCCTTTTGATTTTGAAACTATTGTTCAAGATAAAGTAAGCTATCTAGCCTCTTCGAGTCACTATGCTGAGATTAACTTAATAAAGACGTGGTTTTCTTTATTAAGTCCGAAACAGAAGGAGTTTTCACGTAACATTTTACAAGTTGGTGTTTGCAATGTAAGCTGATATATATTTGATATTTCCTTTCTTGATGCAACTTTAACCCAACTGAAGTTTCGACCTGTTTTCTGAGGCATGGACAAGAGTTTATCACTACCAATTTTTGAAGACTCACATGTGTATACTTAGGAAATTGAAGATTTGTACATATCTATAGCCTAATCTATTTTTCTTCCACACTTTAAAGAGGGGAGGATACACAGTTTTATGTATTGTTTTTATTGAGTACATTAATAAATTCAATGAAATCAAAATTTGTACATTATCCCATTAACTTCCAGTGTCATCTACTCCGTTCGTTTCCTAGAATTTTGCTTGGCTTTTATGTCAAAGCTGTTTTAAGTCTTGGCACAATTCTATTTGATGTTTGACCTCCAACAATAAAGGTATA

Coding sequence (CDS)

ATGGATTTATTGAAGTCATCTGCTAAGAAGGGCTTCGCAATTGTGGTTCTTCTTGGCCAACTTGGGAGGTTAGGCGTAGATGCTGGAGGCTTTGACGATGGAGGAGTTAAGATCTTGAGATTTAATCTATCAGCATTTCTTTGCTTGGAAACTACCATTAAATCAGGTCTCTGTGTTCAAATTGCTACGGTTTCTGCCTTGGTAGGCCTTCTCCCTTTTGATTTTGAAACTATTGTTCAAGATAAAGTAAGCTATCTAGCCTCTTCGAGTCACTATGCTGAGATTAACTTAATAAAGACGTGGTTTTCTTTATTAAGTCCGAAACAGAAGGAGTTTTCACGTAACATTTTACAAGTTGGTGTTTGCAATGTAAGCTGA

Protein sequence

MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVGVCNVS*
BLAST of MELO3C005104 vs. TrEMBL
Match: A0A0A0LYH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537510 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 6.7e-59
Identity = 118/125 (94.40%), Postives = 123/125 (98.40%), Query Frame = 1

Query: 1    MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ 60
            MDL+KSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILR NLSAFLCL+TTIKSGLCVQ
Sbjct: 1347 MDLMKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRSNLSAFLCLDTTIKSGLCVQ 1406

Query: 61   IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG 120
            IATVSAL+GLLPFDFETIVQDKVSYLA+SSHYAE+NLIKTWFSLLSPKQKE SRNILQVG
Sbjct: 1407 IATVSALLGLLPFDFETIVQDKVSYLATSSHYAEVNLIKTWFSLLSPKQKELSRNILQVG 1466

Query: 121  VCNVS 126
            VCNVS
Sbjct: 1467 VCNVS 1471

BLAST of MELO3C005104 vs. TrEMBL
Match: M5WXG4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020787mg PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-21
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1

Query: 14   IVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLPF 73
            IVVLLGQLGRLGVDA G++D G++ILR  LSAFLC ++ I  GL  QIATV+AL+GL+P 
Sbjct: 1303 IVVLLGQLGRLGVDALGYEDKGLEILRCQLSAFLCRDSAISVGLPTQIATVTALLGLVPS 1362

Query: 74   DFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQ 119
            DFETI+Q  V   A +S       I+ WFSLL  KQ++ S   LQ
Sbjct: 1363 DFETIIQGNVEPAAIASQSDPAQSIRKWFSLLPKKQQDLSFGFLQ 1407

BLAST of MELO3C005104 vs. TrEMBL
Match: A0A061G820_THECC (Maternal effect embryo arrest 22, putative OS=Theobroma cacao GN=TCM_027081 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-20
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 1

Query: 13   AIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLP 72
            AI++LLGQLGRLGVDA G++D  V+ LR  LSAFL  ETTI++GL +Q+ATVSAL+GL+ 
Sbjct: 1470 AIIILLGQLGRLGVDAVGYEDKEVENLRVKLSAFLFRETTIRAGLPIQLATVSALLGLIS 1529

Query: 73   FDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQ 119
             D E ++Q  V+    S  +   +LI+ WF LL+ +Q+  S  + Q
Sbjct: 1530 LDIEKVIQKNVTLPVMSGQFVHADLIRNWFPLLTEEQRAMSIRLFQ 1575

BLAST of MELO3C005104 vs. TrEMBL
Match: A0A0D3B4X4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-19
Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 1

Query: 13   AIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLP 72
            AIV LLG+L  +GVDAGG+++ G+  LR  LSAFL  ETT+K+G  VQIATVS+L+  L 
Sbjct: 1166 AIVSLLGELSSIGVDAGGYENEGISNLREKLSAFLQCETTLKAGFAVQIATVSSLMKTLH 1225

Query: 73   FDFETIVQDKVSYL---ASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVGV 122
             DF  +VQ K + L      S  A  NL+  WFSLLS +Q+ FS   LQ  V
Sbjct: 1226 LDFSVVVQGKTTMLPGCGDQSLSASANLVTKWFSLLSDEQRVFSNKFLQTSV 1277

BLAST of MELO3C005104 vs. TrEMBL
Match: A0A078CU99_BRANA (BnaC03g19150D protein OS=Brassica napus GN=BnaC03g19150D PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-19
Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 1

Query: 13  AIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLP 72
           AIV LLG+L  +GVDAGG+++ G+  LR  LSAFL  ETT+K+G  VQIATVS+L+  L 
Sbjct: 89  AIVSLLGELSSIGVDAGGYENEGISNLREKLSAFLQCETTLKAGFAVQIATVSSLMKTLH 148

Query: 73  FDFETIVQDKVSYLASSSHY---AEINLIKTWFSLLSPKQKEFSRNILQVGV 122
            DF  +VQ K + L     +   A  NL+  WFSLLS +Q+ FS   LQ  V
Sbjct: 149 LDFSVVVQGKTTMLPGCGDHSLSASANLVTKWFSLLSDEQRVFSNKFLQTSV 200

BLAST of MELO3C005104 vs. TAIR10
Match: AT2G34780.1 (AT2G34780.1 maternal effect embryo arrest 22)

HSP 1 Score: 94.0 bits (232), Expect = 7.2e-20
Identity = 53/112 (47.32%), Postives = 68/112 (60.71%), Query Frame = 1

Query: 13   AIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLP 72
            AIV LLGQL  +GVDAGG+++ G+  LR  LSAFL  ETT+K+G  VQIATVS+L+  L 
Sbjct: 1184 AIVSLLGQLSSIGVDAGGYENEGISNLRVKLSAFLQCETTLKAGFAVQIATVSSLLKTLQ 1243

Query: 73   FDFETIVQDKVSYLASS---SHYAEINLIKTWFSLLSPKQKEFSRNILQVGV 122
              F    QDK + +  S   S    +N++  W SLLS +Q+ F+   LQ  V
Sbjct: 1244 LKFPIDFQDKTTMIPGSGDQSLSGSVNVVTKWLSLLSKEQRVFAFEFLQTNV 1295

BLAST of MELO3C005104 vs. NCBI nr
Match: gi|659072412|ref|XP_008465517.1| (PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.3e-62
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1

Query: 1    MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ 60
            MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ
Sbjct: 1348 MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ 1407

Query: 61   IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG 120
            IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG
Sbjct: 1408 IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG 1467

Query: 121  VCNVS 126
            VCNVS
Sbjct: 1468 VCNVS 1472

BLAST of MELO3C005104 vs. NCBI nr
Match: gi|659068671|ref|XP_008445605.1| (PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 8.7e-60
Identity = 118/125 (94.40%), Postives = 124/125 (99.20%), Query Frame = 1

Query: 1    MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ 60
            MDL+KSSAKKGFAIV+LLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCL+TTIKSGLCVQ
Sbjct: 1345 MDLMKSSAKKGFAIVILLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLDTTIKSGLCVQ 1404

Query: 61   IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG 120
            IATVSAL+GLLPFDFETI+QDKVSYLASSSHYAE+NLIKTWFSLLSPKQKE SRNILQVG
Sbjct: 1405 IATVSALLGLLPFDFETIIQDKVSYLASSSHYAEVNLIKTWFSLLSPKQKELSRNILQVG 1464

Query: 121  VCNVS 126
            VCNVS
Sbjct: 1465 VCNVS 1469

BLAST of MELO3C005104 vs. NCBI nr
Match: gi|778661908|ref|XP_011658982.1| (PREDICTED: restin homolog [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 9.7e-59
Identity = 118/125 (94.40%), Postives = 123/125 (98.40%), Query Frame = 1

Query: 1    MDLLKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQ 60
            MDL+KSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILR NLSAFLCL+TTIKSGLCVQ
Sbjct: 1347 MDLMKSSAKKGFAIVVLLGQLGRLGVDAGGFDDGGVKILRSNLSAFLCLDTTIKSGLCVQ 1406

Query: 61   IATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQVG 120
            IATVSAL+GLLPFDFETIVQDKVSYLA+SSHYAE+NLIKTWFSLLSPKQKE SRNILQVG
Sbjct: 1407 IATVSALLGLLPFDFETIVQDKVSYLATSSHYAEVNLIKTWFSLLSPKQKELSRNILQVG 1466

Query: 121  VCNVS 126
            VCNVS
Sbjct: 1467 VCNVS 1471

BLAST of MELO3C005104 vs. NCBI nr
Match: gi|1009113149|ref|XP_015871952.1| (PREDICTED: uncharacterized protein LOC107409030 [Ziziphus jujuba])

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-25
Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1

Query: 1    MDLLKSSAKKGFA--IVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLC 60
            + LL+S A + F   I++LLGQLGRLGVDA G++D GV+ LR NL  FLC   T K GL 
Sbjct: 1294 LKLLESCAIENFTSGIIILLGQLGRLGVDAFGYEDKGVQQLRCNLVTFLCGGCT-KKGLL 1353

Query: 61   VQIATVSALVGLLPFDFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQ 120
            VQIATV+AL+GLL  DFETI+QD V +LA+SS     + IK WFS LS KQ++ S N+LQ
Sbjct: 1354 VQIATVTALLGLLSLDFETIIQDTVKFLANSSQSFAADSIKKWFSSLSEKQQDLSLNLLQ 1413

Query: 121  VGVCN 124
             G  N
Sbjct: 1414 TGGVN 1417

BLAST of MELO3C005104 vs. NCBI nr
Match: gi|595883697|ref|XP_007212839.1| (hypothetical protein PRUPE_ppa020787mg [Prunus persica])

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21
Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 1

Query: 14   IVVLLGQLGRLGVDAGGFDDGGVKILRFNLSAFLCLETTIKSGLCVQIATVSALVGLLPF 73
            IVVLLGQLGRLGVDA G++D G++ILR  LSAFLC ++ I  GL  QIATV+AL+GL+P 
Sbjct: 1303 IVVLLGQLGRLGVDALGYEDKGLEILRCQLSAFLCRDSAISVGLPTQIATVTALLGLVPS 1362

Query: 74   DFETIVQDKVSYLASSSHYAEINLIKTWFSLLSPKQKEFSRNILQ 119
            DFETI+Q  V   A +S       I+ WFSLL  KQ++ S   LQ
Sbjct: 1363 DFETIIQGNVEPAAIASQSDPAQSIRKWFSLLPKKQQDLSFGFLQ 1407

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LYH6_CUCSA6.7e-5994.40Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537510 PE=4 SV=1[more]
M5WXG4_PRUPE1.1e-2157.14Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020787mg PE=4 SV=1[more]
A0A061G820_THECC4.7e-2050.00Maternal effect embryo arrest 22, putative OS=Theobroma cacao GN=TCM_027081 PE=4... [more]
A0A0D3B4X4_BRAOL5.2e-1950.89Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A078CU99_BRANA5.2e-1950.00BnaC03g19150D protein OS=Brassica napus GN=BnaC03g19150D PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G34780.17.2e-2047.32 maternal effect embryo arrest 22[more]
Match NameE-valueIdentityDescription
gi|659072412|ref|XP_008465517.1|9.3e-62100.00PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cucumis melo][more]
gi|659068671|ref|XP_008445605.1|8.7e-6094.40PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cucumis melo][more]
gi|778661908|ref|XP_011658982.1|9.7e-5994.40PREDICTED: restin homolog [Cucumis sativus][more]
gi|1009113149|ref|XP_015871952.1|2.4e-2556.80PREDICTED: uncharacterized protein LOC107409030 [Ziziphus jujuba][more]
gi|595883697|ref|XP_007212839.1|1.6e-2157.14hypothetical protein PRUPE_ppa020787mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044710 single-organism metabolic process
biological_process GO:0048731 system development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005104T1MELO3C005104T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35480FAMILY NOT NAMEDcoord: 13..124
score: 2.8
NoneNo IPR availablePANTHERPTHR35480:SF1MATERNAL EFFECT EMBRYO ARREST PROTEINcoord: 13..124
score: 2.8

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None