MELO3C005085 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005085
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative Ty1-copia-like retrotransposon
Locationchr9 : 15769040 .. 15769822 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTCAATCATGGACTTGCAATATCGAGGAACACCAAGATGCTTCCTCCCCTATCTTCGAAATGTTTAGCTCTCGGAACAAGATCTCCATCGTTGAACTAAACGATGACAACTTTCTTCTGTGGAGATTTCAAGTTGTTACAGCATTGGAAGGTTATGATTTAGAAAAATACCTTGATTCTTCCTTAGAACCCCCATCTCAGTTTTTCAATGTCAAAGTCGAAACACCCCAGCCACCCTTGGCGTGTCTTCTCACAAACTATCCAAACTCCAAACCCAGAATTCAAGAAGTGAAAACCCAAGATCAATTAATTTCTTCATGGTTGCTCGGTTTGATGAATGAGGATATTCTCAACCAAATGCTCAACTGCAACTCCACAAAGGATATATGGGCCAATCTTCATGGAATTTATTTTGCACGATGTCTTGCTCAAGCAATGCAATTAAAGAGTAAGCTTCAAAACATAAAGAAAAGAGTTGTGCCTTTGAAAGAATATTTCATGAAAATCCAACAATGTGTTGATGCTCTGGCTTCAGTCGGTAAACCTACACCCTCTGATGATCATATTTTATATATTCTTGCTGGATTAGGACCAGAATATGAATCTATGATATCTGATTTCTGCCTGTACTGTTCTCCCTCTATACAAGACATTACTTCACTATTACTTACTAAGGAATCCTGTATTAAGTGTACCATCAAAGCAGAAAGCTCTCTGTCATCGGCTAACTTGGCTGCTCAAGGGTTGGAAAAAGACAGTGATCAATCGATTAAATAA

mRNA sequence

ATGAGAATTCAATCATGGACTTGCAATATCGAGGAACACCAAGATGCTTCCTCCCCTATCTTCGAAATGTTTAGCTCTCGGAACAAGATCTCCATCGTTGAACTAAACGATGACAACTTTCTTCTGTGGAGATTTCAAGTTGTTACAGCATTGGAAGGTTATGATTTAGAAAAATACCTTGATTCTTCCTTAGAACCCCCATCTCAGTTTTTCAATGTCAAAGTCGAAACACCCCAGCCACCCTTGGCGTGTCTTCTCACAAACTATCCAAACTCCAAACCCAGAATTCAAGAAGTGAAAACCCAAGATCAATTAATTTCTTCATGGTTGCTCGGTTTGATGAATGAGGATATTCTCAACCAAATGCTCAACTGCAACTCCACAAAGGATATATGGGCCAATCTTCATGGAATTTATTTTGCACGATGTCTTGCTCAAGCAATGCAATTAAAGAGTAAGCTTCAAAACATAAAGAAAAGAGTTGTGCCTTTGAAAGAATATTTCATGAAAATCCAACAATGTGTTGATGCTCTGGCTTCAGTCGGTAAACCTACACCCTCTGATGATCATATTTTATATATTCTTGCTGGATTAGGACCAGAATATGAATCTATGATATCTGATTTCTGCCTGTACTGTTCTCCCTCTATACAAGACATTACTTCACTATTACTTACTAAGGAATCCTGTATTAAGTGTACCATCAAAGCAGAAAGCTCTCTGTCATCGGCTAACTTGGCTGCTCAAGGGTTGGAAAAAGACAGTGATCAATCGATTAAATAA

Coding sequence (CDS)

ATGAGAATTCAATCATGGACTTGCAATATCGAGGAACACCAAGATGCTTCCTCCCCTATCTTCGAAATGTTTAGCTCTCGGAACAAGATCTCCATCGTTGAACTAAACGATGACAACTTTCTTCTGTGGAGATTTCAAGTTGTTACAGCATTGGAAGGTTATGATTTAGAAAAATACCTTGATTCTTCCTTAGAACCCCCATCTCAGTTTTTCAATGTCAAAGTCGAAACACCCCAGCCACCCTTGGCGTGTCTTCTCACAAACTATCCAAACTCCAAACCCAGAATTCAAGAAGTGAAAACCCAAGATCAATTAATTTCTTCATGGTTGCTCGGTTTGATGAATGAGGATATTCTCAACCAAATGCTCAACTGCAACTCCACAAAGGATATATGGGCCAATCTTCATGGAATTTATTTTGCACGATGTCTTGCTCAAGCAATGCAATTAAAGAGTAAGCTTCAAAACATAAAGAAAAGAGTTGTGCCTTTGAAAGAATATTTCATGAAAATCCAACAATGTGTTGATGCTCTGGCTTCAGTCGGTAAACCTACACCCTCTGATGATCATATTTTATATATTCTTGCTGGATTAGGACCAGAATATGAATCTATGATATCTGATTTCTGCCTGTACTGTTCTCCCTCTATACAAGACATTACTTCACTATTACTTACTAAGGAATCCTGTATTAAGTGTACCATCAAAGCAGAAAGCTCTCTGTCATCGGCTAACTTGGCTGCTCAAGGGTTGGAAAAAGACAGTGATCAATCGATTAAATAA

Protein sequence

MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEYESMISDFCLYCSPSIQDITSLLLTKESCIKCTIKAESSLSSANLAAQGLEKDSDQSIK*
Homology
[Close]
BLAST of MELO3C005085 vs. TrEMBL
Match: A5BDX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041315 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-23
Identity = 69/228 (30.26%), Postives = 119/228 (52.19%), Query Frame = 1 

Query: 23  MFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPL 82
           + S  +++  + L DDNFL+W++Q+  A+ GY LE +L  + + P +    K+    P  
Sbjct: 238 VISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVTDKIGVLVP-- 297

Query: 83  ACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFAR 142
                      P+ ++ + QD L+ SWLL  +    L Q++ C+S  ++W  +   + ++
Sbjct: 298 ----------NPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQ 357

Query: 143 CLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEY 202
             A+ M  KS++Q +KK  + +++Y  K++   D LA+ G      DHIL I+ GLG EY
Sbjct: 358 SSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEY 417

Query: 203 ESMISDF-CLYCSPSIQDITSLLLTKESCIKCTIKAESSLSSANLAAQ 250
           E +I+       SPS+Q +TS L+  E   +   K  S+  S N  +Q
Sbjct: 418 EXVIAVIXSKKSSPSLQYVTSTLIAHEG--RIAHKISSNDLSXNYTSQ 451

[Close]
BLAST of MELO3C005085 vs. TrEMBL
Match: A5B6L3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028658 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.4e-23
Identity = 75/253 (29.64%), Postives = 125/253 (49.41%), Query Frame = 1 

Query: 7   TCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEP 66
           T   E  + A SP+ ++ + R       L DDNFL+W++Q+   + GY LE +L  + + 
Sbjct: 26  TTTDESLRMAISPLSQLITMR-------LEDDNFLMWKYQIENVVRGYGLEGFLFGTEQV 85

Query: 67  PSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCN 126
           P +  N       P             P+ ++ + QD L+ SWLL  +    L Q++ C+
Sbjct: 86  PPKMVNDGTGILVP------------NPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCS 145

Query: 127 STKDIWANLHGIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTP 186
           S  ++W  +   + ++  A+ M  KS++  +KK  + +++Y  K++   D LA+ G    
Sbjct: 146 SAFEVWNTISHNFNSQSSAKVMFYKSQMHMLKKDGLTMRDYLTKMKNYCDLLATAGHKIS 205

Query: 187 SDDHILYILAGLGPEYESMISDF-CLYCSPSIQDITSLLLTKESCIKCTIKAESSLSSAN 246
             DHIL I+ GLG EYES+I+       SPS+Q +TS L+  E   +   K  S+  S N
Sbjct: 206 DTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHEG--RIAHKISSNDLSVN 257

Query: 247 LAAQGLEKDSDQS 259
             +Q   + S  S
Sbjct: 266 YTSQYSNRGSSSS 257

[Close]
BLAST of MELO3C005085 vs. TrEMBL
Match: A5AD69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008660 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22
Identity = 74/232 (31.90%), Postives = 127/232 (54.74%), Query Frame = 1 

Query: 17  SSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVE 76
           SS  F + +  + +S V+L++ NFL+W+ Q+V+A+ GY L+K++ S  +   QF   +  
Sbjct: 16  SSTCFVLINFNHLLS-VKLDNKNFLIWKQQIVSAIRGYGLQKFVLSDDKVLVQFLTRED- 75

Query: 77  TPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLH 136
                          +     E +  DQL+ SWLL  + E IL +++ C+++  +W  L 
Sbjct: 76  ----------ARSGKATKEFLEWEQHDQLLLSWLLSFVFESILPRLVGCDTSFLLWGRLE 135

Query: 137 GIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILA 196
             + ++  A+A Q K++LQ+ KK    + EY +KI+ CVD+LASVG    + DH   IL 
Sbjct: 136 QYFVSQTRAKAKQFKTQLQHTKKGGSTIDEYLVKIKVCVDSLASVGVSLSTKDHFESILN 195

Query: 197 GLGPEYESMISDFCLYCSP-SIQDITSLLLTKESCIKCTIKAESSLSSANLA 248
           GL  +YES ++   L     S+++I +LL+   S ++    +  S SSA++A
Sbjct: 196 GLPNDYESFVTSITLRNDDFSVEEIEALLMAHASRVEKNNSSLDSSSSAHVA 235

[Close]
BLAST of MELO3C005085 vs. TrEMBL
Match: A5BK17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024648 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21
Identity = 71/215 (33.02%), Postives = 118/215 (54.88%), Query Frame = 1 

Query: 34  ELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPLACLLTNYPNSK 93
           +L++ NFL+ R Q++T L G+ L+ +L  +   PS+F +   ET          N+ N  
Sbjct: 22  KLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQ---------NHVN-- 81

Query: 94  PRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFARCLAQAMQLKSK 153
           P+ Q+ + Q QLI S LL  + + +L +M+NC+++  +W  L   +  +  A+  Q K++
Sbjct: 82  PKFQDWEQQXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQ 141

Query: 154 LQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEYESMISDFCLYC 213
           L N KK  + + +Y +KI+  VD LA VG      DHI  I  GL  +YE+ I       
Sbjct: 142 LHNTKKGDLSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRL 201

Query: 214 SP-SIQDITSLLLTKESCIKCTIKAESSLSSANLA 248
            P ++++I +LLL +ES I+  IK  +  S+ +LA
Sbjct: 202 DPYTVEEIEALLLAQESRIEKNIKI-ADFSTPSLA 224

[Close]
BLAST of MELO3C005085 vs. TrEMBL
Match: A0A151R7U6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_040042 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21
Identity = 61/188 (32.45%), Postives = 105/188 (55.85%), Query Frame = 1 

Query: 15  DASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVK 74
           D ++P    F++   +  + LN +NFLLWR QV + L+  +L   +D S+EPPS      
Sbjct: 3   DDTTPPSLPFATLVHMITIRLNSENFLLWRKQVTSLLQNQNLFHIVDGSVEPPSP----- 62

Query: 75  VETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWAN 134
                     +L + PN  PR  + + QD+ ++S LL  + E+ L++ L+ ++ +DIW  
Sbjct: 63  ----------ILDSIPN--PRFAQWQAQDRNVTSLLLSSLTEEALSETLSADTARDIWNA 122

Query: 135 LHGIYFARCLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYI 194
           LH  Y +R  A+ ++L+ +LQ +++  + + EY  K +   D LA++G P  +DD + + 
Sbjct: 123 LHTAYASRSKARELRLRDELQLMRRGSISVTEYGKKFRTICDQLAAIGAPIANDDKVHWF 173

Query: 195 LAGLGPEY 203
           L GLGP Y
Sbjct: 183 LRGLGPSY 173

[Close]
BLAST of MELO3C005085 vs. NCBI nr
Match: gi|659072370|ref|XP_008465350.1| (PREDICTED: uncharacterized protein LOC103502987 isoform X1 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 4.4e-82
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 1 

Query: 1   MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL 60
           MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL
Sbjct: 1   MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL 60

Query: 61  DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN 120
           DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN
Sbjct: 61  DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN 120

Query: 121 QMLNCNSTKDIWANLHGIYFARCLAQAMQLKS 153
           QMLNCNSTKDIWANLHGIYFARCLAQAMQLK+
Sbjct: 121 QMLNCNSTKDIWANLHGIYFARCLAQAMQLKT 152

[Close]
BLAST of MELO3C005085 vs. NCBI nr
Match: gi|659072372|ref|XP_008465355.1| (PREDICTED: uncharacterized protein LOC103502987 isoform X2 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 4.4e-82
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 1 

Query: 1   MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL 60
           MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL
Sbjct: 1   MRIQSWTCNIEEHQDASSPIFEMFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYL 60

Query: 61  DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN 120
           DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN
Sbjct: 61  DSSLEPPSQFFNVKVETPQPPLACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILN 120

Query: 121 QMLNCNSTKDIWANLHGIYFARCLAQAMQLKS 153
           QMLNCNSTKDIWANLHGIYFARCLAQAMQLK+
Sbjct: 121 QMLNCNSTKDIWANLHGIYFARCLAQAMQLKT 152

[Close]
BLAST of MELO3C005085 vs. NCBI nr
Match: gi|985463684|ref|XP_015388942.1| (PREDICTED: uncharacterized protein LOC107178370 [Citrus sinensis])

HSP 1 Score: 118.2 bits (295), Expect = 2.1e-23
Identity = 62/217 (28.57%), Postives = 127/217 (58.53%), Query Frame = 1 

Query: 33  VELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPLACLLTNYPNS 92
           ++L  +NF+LWR QVV+++   +LE +++ S   P ++F     +P P  A +     + 
Sbjct: 57  IKLTQNNFMLWRSQVVSSIRANELEGFINGSYTCPPRYFT----SPGPNQATIT----HQ 116

Query: 93  KPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFARCLAQAMQLKS 152
            P  Q  K QD ++ SWLL  ++E +L  +++C+++ ++W  L   Y AR  A+ + L++
Sbjct: 117 NPEYQIWKKQDHILLSWLLSSLSEGVLGTVVDCSTSHEVWTTLTNQYGARTRARILYLRT 176

Query: 153 KLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEYESMISDF-CL 212
           ++Q  KK  + + +Y+ +++  ++ L + G     +D I+ +LAG+G EY+S++++   +
Sbjct: 177 QIQTTKKGSLTIHDYYSRMKTILNTLRAAGNNMSDEDFIMCVLAGVGSEYDSVVTNINYM 236

Query: 213 YCSPSIQDITSLLLTKESCIKCTIKAESSLSSANLAA 249
             +PS+ ++ S+LL++E+      + E +LS   L A
Sbjct: 237 PETPSLSEVYSMLLSQET------RTEQNLSPGTLKA 259

[Close]
BLAST of MELO3C005085 vs. NCBI nr
Match: gi|731376676|ref|XP_010656394.1| (PREDICTED: uncharacterized protein LOC104880653 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23
Identity = 69/228 (30.26%), Postives = 119/228 (52.19%), Query Frame = 1 

Query: 23  MFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPL 82
           + S  +++  + L DDNFL+W++Q+   + GY LE +L  + + P +    K+    P  
Sbjct: 35  VISPLSQLITMRLEDDNFLMWKYQIENVVRGYGLEGFLFGTEQVPPKMVTDKIGVLVP-- 94

Query: 83  ACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFAR 142
                      P+ ++ + QD L+ SWLL  +    L Q++ C+S  ++W  +   + ++
Sbjct: 95  ----------NPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQ 154

Query: 143 CLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEY 202
             A+ M  KS++Q +KK  + +++Y  K++   D LA+ G      DHIL I+ GLG EY
Sbjct: 155 SSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEY 214

Query: 203 ESMISDF-CLYCSPSIQDITSLLLTKESCIKCTIKAESSLSSANLAAQ 250
           ES+I+       SPS+Q +TS L+  E   +   K  S+  S N  +Q
Sbjct: 215 ESVIAVISSKKSSPSLQYVTSTLIAHEG--RIAHKISSNDLSMNYTSQ 248

[Close]
BLAST of MELO3C005085 vs. NCBI nr
Match: gi|147765953|emb|CAN67819.1| (hypothetical protein VITISV_041315 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 6.1e-23
Identity = 69/228 (30.26%), Postives = 119/228 (52.19%), Query Frame = 1 

Query: 23  MFSSRNKISIVELNDDNFLLWRFQVVTALEGYDLEKYLDSSLEPPSQFFNVKVETPQPPL 82
           + S  +++  + L DDNFL+W++Q+  A+ GY LE +L  + + P +    K+    P  
Sbjct: 238 VISPLSQLITMRLEDDNFLMWKYQIENAVRGYGLEGFLFGTEQVPPKMVTDKIGVLVP-- 297

Query: 83  ACLLTNYPNSKPRIQEVKTQDQLISSWLLGLMNEDILNQMLNCNSTKDIWANLHGIYFAR 142
                      P+ ++ + QD L+ SWLL  +    L Q++ C+S  ++W  +   + ++
Sbjct: 298 ----------NPKFRDYQRQDHLLISWLLSSIGSAFLPQVVGCSSAFEVWNTISQNFNSQ 357

Query: 143 CLAQAMQLKSKLQNIKKRVVPLKEYFMKIQQCVDALASVGKPTPSDDHILYILAGLGPEY 202
             A+ M  KS++Q +KK  + +++Y  K++   D LA+ G      DHIL I+ GLG EY
Sbjct: 358 SSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEY 417

Query: 203 ESMISDF-CLYCSPSIQDITSLLLTKESCIKCTIKAESSLSSANLAAQ 250
           E +I+       SPS+Q +TS L+  E   +   K  S+  S N  +Q
Sbjct: 418 EXVIAVIXSKKSSPSLQYVTSTLIAHEG--RIAHKISSNDLSXNYTSQ 451

The following BLAST results are available for this feature:
BLAST of MELO3C005085 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BDX8_VITVI4.2e-2330.26Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041315 PE=4 SV=1[more]
A5B6L3_VITVI9.4e-2329.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028658 PE=4 SV=1[more]
A5AD69_VITVI1.6e-2231.90Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008660 PE=4 SV=1[more]
A5BK17_VITVI3.0e-2133.02Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024648 PE=4 SV=1[more]
A0A151R7U6_CAJCA3.0e-2132.45Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
BLAST of MELO3C005085 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072370|ref|XP_008465350.1|4.4e-8299.34PREDICTED: uncharacterized protein LOC103502987 isoform X1 [Cucumis melo][more]
gi|659072372|ref|XP_008465355.1|4.4e-8299.34PREDICTED: uncharacterized protein LOC103502987 isoform X2 [Cucumis melo][more]
gi|985463684|ref|XP_015388942.1|2.1e-2328.57PREDICTED: uncharacterized protein LOC107178370 [Citrus sinensis][more]
gi|731376676|ref|XP_010656394.1|4.7e-2330.26PREDICTED: uncharacterized protein LOC104880653 [Vitis vinifera][more]
gi|147765953|emb|CAN67819.1|6.1e-2330.26hypothetical protein VITISV_041315 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
cellular_component GO:0009536 plastid
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46437melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005085T1MELO3C005085T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46437MU46437transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 88..258
score: 2.6E-27coord: 1..70
score: 2.6
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 1..70
score: 2.6E-27coord: 88..258
score: 2.6
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 100..227
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005085CmaCh04G012940Cucurbita maxima (Rimu)cmameB633
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005085Silver-seed gourdcarmeB0483
MELO3C005085Silver-seed gourdcarmeB0821
MELO3C005085Cucumber (Chinese Long) v3cucmeB352
MELO3C005085Watermelon (97103) v2mewmbB009
MELO3C005085Cucumber (Gy14) v1cgymeB493
MELO3C005085Cucurbita maxima (Rimu)cmameB252
MELO3C005085Cucurbita maxima (Rimu)cmameB635
MELO3C005085Cucurbita moschata (Rifu)cmomeB240
MELO3C005085Cucurbita moschata (Rifu)cmomeB625
MELO3C005085Wild cucumber (PI 183967)cpimeB577
MELO3C005085Cucumber (Chinese Long) v2cumeB084
MELO3C005085Watermelon (Charleston Gray)mewcgB019
MELO3C005085Watermelon (97103) v1mewmB032
MELO3C005085Cucurbita pepo (Zucchini)cpemeB157
MELO3C005085Cucurbita pepo (Zucchini)cpemeB359
MELO3C005085Bottle gourd (USVL1VR-Ls)lsimeB013
MELO3C005085Cucumber (Gy14) v2cgybmeB295