MELO3C005065 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005065
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
Locationchr9 : 15391173 .. 15391499 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTTGGTACAGGATATTATGATGCAGGGGTCGGTCCAACGTCTTCATACATGGATGTCGGTCTATTAACTTCTTACATGCATGGACACAGACGTGGCTATGGGGAACACAACGAATATCTGTATCATGAAGCACCTGCGATGTATCAGATCGACAAAAGTATTAACAAGAACCAGAGAACCAAAAGGATCAAGAACAACATAGAGTTCAGAGTCGACGTTGACAACCAGCTCAAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTCTTTTATCAATCAAATAA

mRNA sequence

ATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTTGGTACAGGATATTATGATGCAGGGGTCGGTCCAACGTCTTCATACATGGATGTCGGTCTATTAACTTCTTACATGCATGGACACAGACGTGGCTATGGGGAACACAACGAATATCTGTATCATGAAGCACCTGCGATGTATCAGATCGACAAAAGTATTAACAAGAACCAGAGAACCAAAAGGATCAAGAACAACATAGAGTTCAGAGTCGACGTTGACAACCAGCTCAAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTCTTTTATCAATCAAATAA

Coding sequence (CDS)

ATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTTGGTACAGGATATTATGATGCAGGGGTCGGTCCAACGTCTTCATACATGGATGTCGGTCTATTAACTTCTTACATGCATGGACACAGACGTGGCTATGGGGAACACAACGAATATCTGTATCATGAAGCACCTGCGATGTATCAGATCGACAAAAGTATTAACAAGAACCAGAGAACCAAAAGGATCAAGAACAACATAGAGTTCAGAGTCGACGTTGACAACCAGCTCAAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTCTTTTATCAATCAAATAA

Protein sequence

MMPTFGAGYCDSEVGTGYYDAGVGPTSSYMDVGLLTSYMHGHRRGYGEHNEYLYHEAPAMYQIDKSINKNQRTKRIKNNIEFRVDVDNQLKIDDVQVVEHIDFLLSIK*
Homology
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BLAST of MELO3C005065 vs. NCBI nr
Match: gi|659069376|ref|XP_008449513.1| (PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-08
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 1 

Query: 1   MMPTFGAGYCDSEVGT------GYYDAGVGPTSS-----YMDVGL--LTSYMHGHRRGYG 60
           MMPTFG  Y DS VG       GYY++  G +S+     Y D+G    +SYMHGH RG G
Sbjct: 136 MMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRG 195

Query: 61  EHNEYLYHEAPAMYQIDKSINKNQRTKRIKNNIEFRVDVDNQLKIDDVQV 98
           EHNEYLY++ PA         + Q    +    + +   +N  +I   +V
Sbjct: 196 EHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQQQRV 245

The following BLAST results are available for this feature:
BLAST of MELO3C005065 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069376|ref|XP_008449513.1|1.0e-0837.27PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005065T1MELO3C005065T1mRNA