MELO3C005017.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005017.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	ATP synthase subunit alpha
Location	chr12 : 4475367 .. 4475866 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGGCGTATGGTCGGTGCCTTGGAAGCACCTATTGATGGAAGAGGGGCTTTCAGCGATCATGAGCGAAGATGTATCAAAGTGAAAGCCCTTGGAATTATTGAACGTAAATCAGGGCATGATCCTATGAAAATAGGGTTAAAAGCGGTGGATAGCCTGGTTCCTATAGGTAGGAGCCAACAAGTACTGATAATCAAGGAGCGAAAAACTAGAAGAATTGATTTAGCTATTAATACCATATTAAACCAAAAGCAAATAAACTCCACTCAATTCAAATGCTTTGTTGTGAACCTCTATTTTTTTCTTGTTCGGATTATGCCTGCTATTATAATTTTTTTTCTATC

mRNA sequence

ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGGCGTATGGTCGGTGCCTTGGAAGCACCTATTGATGGAAGAGGGGCTTTCAGCGATCATGAGCGAAGATGTATCAAAGTGAAAGCCCTTGGAATTATTGAACGTAAATCAGGGCATGATCCTATGAAAATAGGGTTAAAAGCGGTGGATAGCCTGGTTCCTATAGGTAGGAGCCAACAAGTACTGATAATCAAGGAGCGAAAAACTAGAAGAATTGATTTAGCTATTAATACCATATTAAACCAAAAGCAAATAAACTCCACTCAATTCAAATGCTTTGTTGTGAACCTCTATTTTTTTCTTGTTCGGATTATGCCTGCTATTATAATTTTTTTTCTATC

Coding sequence (CDS)

ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGGCGTATGGTCGGTGCCTTGGAAGCACCTATTGATGGAAGAGGGGCTTTCAGCGATCATGAGCGAAGATGTATCAAAGTGAAAGCCCTTGGAATTATTGAACGTAAATCAGGGCATGATCCTATGAAAATAGGGTTAAAAGCGGTGGATAGCCTGGTTCCTATAGGTAGGAGCCAACAAGTACTGATAATCAAGGAGCGAAAAACTAGAAGAATTGATTTAGCTATTAATACCATATTAAACCAAAAGCAAATAAACTCCACTCAATTCAAATGCTTTGTTGTGAACCTCTATTTTTTTCTTGTTCGGATTATGCCTGCTATTATAATTTTTTTTCTA

Protein sequence

MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFFL

Homology

[Close]

BLAST of MELO3C005017.2 vs. NCBI nr
Match: AEN56122.1 (putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
            APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDS     R Q+ LII +R
Sbjct: 114 GAPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDS-----RGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF 165
           +T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Sbjct: 174 QTGKTAIAIDTILNQKQIHSTQFKCFALNLCFFLVRILPPISIF 212

[Close]

BLAST of MELO3C005017.2 vs. NCBI nr
Match: AEP32426.1 (ATPase synthase subunit 1, partial (mitochondrion) [Silene vulgaris])

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AINTILNQKQ+NS
Sbjct: 174 QTGKTAIAINTILNQKQLNS 193

[Close]

BLAST of MELO3C005017.2 vs. NCBI nr
Match: ADL63309.1 (Atp1, partial (mitochondrion) [Stellaria sp. Qiu 95015])

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGRMV AL
Sbjct: 4   MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRMVDAL 63

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 64  GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 123

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 124 QTGKTAIAIDTILNQKQLNS 143

[Close]

BLAST of MELO3C005017.2 vs. NCBI nr
Match: ADL63316.1 (Atp1, partial (mitochondrion) [Terminalia catappa])

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50
Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 4   MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 63

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
           E PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 64  EVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 123

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQK++NS
Sbjct: 124 QTGKTAIAIDTILNQKELNS 143

[Close]

BLAST of MELO3C005017.2 vs. NCBI nr
Match: AUD38671.1 (ATP synthase F1 subunit 1 (mitochondrion) [Colletoecema dewevrei])

HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF NGVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFANGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

[Close]

BLAST of MELO3C005017.2 vs. TAIR10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 198.4 bits (503), Expect = 3.6e-51
Identity = 100/140 (71.43%), Postives = 120/140 (85.71%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLGR+V A+
Sbjct: 324 MVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAM 383

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDG+GA SDHE+R ++VKA GI+ERKS H+PM+ GLKAVDSLVPIGR Q+ L+I +R
Sbjct: 384 GVPIDGKGALSDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDR 443

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQINS
Sbjct: 444 QTGKTTIAIDTILNQKQINS 463

[Close]

BLAST of MELO3C005017.2 vs. TAIR10
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 100/140 (71.43%), Postives = 119/140 (85.00%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLGR+V A+
Sbjct: 54  MVLFANGVKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAM 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDG+GA SDHE+R ++VKA GI+ERKS H+PM+ GLKAVDSLVPIGR Q+ L+I  R
Sbjct: 114 GVPIDGKGALSDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQINS
Sbjct: 174 QTGKTTIAIDTILNQKQINS 193

[Close]

BLAST of MELO3C005017.2 vs. TAIR10
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-30
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           +VEF  G  GIALNLE+ +V +V+ G    I+EG  VK TG I  IP  +  LGR++ AL
Sbjct: 53  LVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINAL 112

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRG  S  E R I+  A GII R+S ++P++ GL A+DS++PIGR Q+ LII +R
Sbjct: 113 ANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDR 172

Query: 121 KTRRIDLAINTILNQKQIN 140
           +T +  +A +TILNQ+  N
Sbjct: 173 QTGKTAVATDTILNQQGQN 191

[Close]

BLAST of MELO3C005017.2 vs. Swiss-Prot
Match: sp|Q06735|ATPAM_BETVU (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.1e-52
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQLNS 193

[Close]

BLAST of MELO3C005017.2 vs. Swiss-Prot
Match: sp|P18260|ATPAM_HELAN (ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-52
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

[Close]

BLAST of MELO3C005017.2 vs. Swiss-Prot
Match: sp|P24459|ATPAM_PHAVU (ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-52
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

[Close]

BLAST of MELO3C005017.2 vs. Swiss-Prot
Match: sp|Q01915|ATPAM_SOYBN (ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-52
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

[Close]

BLAST of MELO3C005017.2 vs. Swiss-Prot
Match: sp|P05494|ATPAM_MAIZE (ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.0e-52
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDG+GA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGKGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

[Close]

BLAST of MELO3C005017.2 vs. TrEMBL
Match: tr|G3EU37|G3EU37_CUCME (Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.9e-54
Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFSSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
            APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDS     R Q+ LII +R
Sbjct: 114 GAPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDS-----RGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF 165
           +T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Sbjct: 174 QTGKTAIAIDTILNQKQIHSTQFKCFALNLCFFLVRILPPISIF 212

[Close]

BLAST of MELO3C005017.2 vs. TrEMBL
Match: tr|H8XXL6|H8XXL6_SILVU (ATP synthase subunit alpha (Fragment) OS=Silene vulgaris OX=42043 GN=Atp1.1 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AINTILNQKQ+NS
Sbjct: 174 QTGKTAIAINTILNQKQLNS 193

[Close]

BLAST of MELO3C005017.2 vs. TrEMBL
Match: tr|E5DKJ1|E5DKJ1_9CARY (ATP synthase subunit alpha (Fragment) OS=Stellaria sp. Qiu 95015 OX=202449 GN=atp1 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGRMV AL
Sbjct: 4   MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRMVDAL 63

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 64  GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 123

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 124 QTGKTAIAIDTILNQKQLNS 143

[Close]

BLAST of MELO3C005017.2 vs. TrEMBL
Match: tr|E5DKJ8|E5DKJ8_TERCT (ATP synthase subunit alpha (Fragment) OS=Terminalia catappa OX=39993 GN=atp1 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-50
Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 4   MVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 63

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
           E PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 64  EVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 123

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQK++NS
Sbjct: 124 QTGKTAIAIDTILNQKELNS 143

[Close]

BLAST of MELO3C005017.2 vs. TrEMBL
Match: tr|A0A2H4WZE0|A0A2H4WZE0_9GENT (ATP synthase subunit alpha OS=Colletoecema dewevrei OX=110689 GN=atp1 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-50
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGAL 60
           MVEF NGVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL
Sbjct: 54  MVEFANGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAL 113

Query: 61  EAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGRSQQVLIIKER 120
             PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLKAVDSLVPIGR Q+ LII +R
Sbjct: 114 GVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDR 173

Query: 121 KTRRIDLAINTILNQKQINS 141
           +T +  +AI+TILNQKQ+NS
Sbjct: 174 QTGKTAIAIDTILNQKQMNS 193

The following BLAST results are available for this feature:

BLAST of MELO3C005017.2 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56122.1	2.8e-54	73.17	putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo]	[more]
AEP32426.1	2.5e-50	76.43	ATPase synthase subunit 1, partial (mitochondrion) [Silene vulgaris]	[more]
ADL63309.1	3.2e-50	76.43	Atp1, partial (mitochondrion) [Stellaria sp. Qiu 95015]	[more]
ADL63316.1	3.2e-50	75.71	Atp1, partial (mitochondrion) [Terminalia catappa]	[more]
AUD38671.1	3.2e-50	76.43	ATP synthase F1 subunit 1 (mitochondrion) [Colletoecema dewevrei]	[more]

BLAST of MELO3C005017.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07698.1	3.6e-51	71.43	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	1.0e-50	71.43	ATP synthase subunit 1	[more]
ATCG00120.1	2.7e-30	48.92	ATP synthase subunit alpha	[more]

BLAST of MELO3C005017.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q06735\|ATPAM_BETVU	3.1e-52	75.71	ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=...	[more]
sp\|P18260\|ATPAM_HELAN	4.0e-52	75.71	ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus OX=4232 GN=ATPA P...	[more]
sp\|P24459\|ATPAM_PHAVU	4.0e-52	75.71	ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA ...	[more]
sp\|Q01915\|ATPAM_SOYBN	4.0e-52	75.71	ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV...	[more]
sp\|P05494\|ATPAM_MAIZE	9.0e-52	75.00	ATP synthase subunit alpha, mitochondrial OS=Zea mays OX=4577 GN=ATPA PE=3 SV=1	[more]

BLAST of MELO3C005017.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|G3EU37\|G3EU37_CUCME	1.9e-54	73.17	Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1...	[more]
tr\|H8XXL6\|H8XXL6_SILVU	1.6e-50	76.43	ATP synthase subunit alpha (Fragment) OS=Silene vulgaris OX=42043 GN=Atp1.1 PE=3...	[more]
tr\|E5DKJ1\|E5DKJ1_9CARY	2.1e-50	76.43	ATP synthase subunit alpha (Fragment) OS=Stellaria sp. Qiu 95015 OX=202449 GN=at...	[more]
tr\|E5DKJ8\|E5DKJ8_TERCT	2.1e-50	75.71	ATP synthase subunit alpha (Fragment) OS=Terminalia catappa OX=39993 GN=atp1 PE=...	[more]
tr\|A0A2H4WZE0\|A0A2H4WZE0_9GENT	2.1e-50	76.43	ATP synthase subunit alpha OS=Colletoecema dewevrei OX=110689 GN=atp1 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:1902600	hydrogen ion transmembrane transport
GO:0046034	ATP metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR036121	ATPase_F1/V1/A1_a/bsu_N_sf
IPR023366	ATP_synth_asu-like_sf
IPR004100	ATPase_F1/V1/A1_a/bsu_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006811	ion transport
biological_process	GO:0015992	proton transport
biological_process	GO:0006810	transport
biological_process	GO:1902600	hydrogen ion transmembrane transport
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0032559	adenyl ribonucleotide binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005017.2.1	MELO3C005017.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	PFAM	PF02874	ATP-synt_ab_N	coord: 2..41 e-value: 5.5E-9 score: 36.3
IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	GENE3D	G3DSA:2.40.30.20		coord: 1..43 e-value: 8.2E-16 score: 59.3
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 44..154 e-value: 6.1E-23 score: 83.4
None	No IPR available	PANTHER	PTHR43089	FAMILY NOT NAMED	coord: 1..142
None	No IPR available	PANTHER	PTHR43089:SF5	ATP SYNTHASE SUBUNIT ALPHA	coord: 1..142
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 1..44
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 45..147

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005017.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C005017.2	Cucumber (Gy14) v1	cgymedB371
MELO3C005017.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C005017.2	Cucurbita maxima (Rimu)	cmamedB451
MELO3C005017.2	Cucurbita maxima (Rimu)	cmamedB640
MELO3C005017.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C005017.2	Cucurbita moschata (Rifu)	cmomedB439
MELO3C005017.2	Cucurbita moschata (Rifu)	cmomedB628
MELO3C005017.2	Cucurbita pepo (Zucchini)	cpemedB314
MELO3C005017.2	Cucurbita pepo (Zucchini)	cpemedB561
MELO3C005017.2	Cucurbita pepo (Zucchini)	cpemedB581
MELO3C005017.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C005017.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C005017.2	Melon (DHL92) v3.6.1	medmedB034
MELO3C005017.2	Bottle gourd (USVL1VR-Ls)	lsimedB064
MELO3C005017.2	Bottle gourd (USVL1VR-Ls)	lsimedB183
MELO3C005017.2	Watermelon (Charleston Gray)	medwcgB140
MELO3C005017.2	Watermelon (Charleston Gray)	medwcgB141
MELO3C005017.2	Watermelon (97103) v1	medwmB143
MELO3C005017.2	Watermelon (97103) v1	medwmB174
MELO3C005017.2	Silver-seed gourd	carmedB0451
MELO3C005017.2	Silver-seed gourd	carmedB0734
MELO3C005017.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C005017.2	Watermelon (97103) v2	medwmbB142
MELO3C005017.2	Watermelon (97103) v2	medwmbB140
MELO3C005017.2	Wax gourd	medwgoB156
MELO3C005017.2	Wax gourd	medwgoB169