MELO3C005010 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005010
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBMP and activin membrane-bound inhibitor homolog
Locationchr12 : 4676310 .. 4676786 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAAAAGACTACACGATAAAGGCCCATGCGGAGATGTTTAGAGACATCGGGTGCAACATGTTAGGACCCAACGACGGTGTCCCCGCAGAGGATGGCTTAGAGATGGAGTTAATGGCTATGTACAGTCTGAGGATGAACATGTCATCAAACGACATGATGGCCAGTCGTTTTGGTCAGTCCAACTATGCTAGGTCGAGCTCTAATGGTCAGAAAAGGAAGCGCGACATGCAGCCGTTTGAGACTTATGATCTTAATCGGGATGCCATGGACGCTGCAAATGATCAGATTAGAATCATTGCTAAATGGCCTGATAGAGCTATCCATCGAGAGGATGCGATGGTGCGGGAAGTCATTACGCATATAGAGTTTATTCCGGGCCTTAGTATGGAGGACATCAGTAAATGCGTGATGATAGTGACAGAGAAGGTATTGCTAATGAGAAGCTTCATCAAGATGCCCGATTCGATGTAG

mRNA sequence

ATGTTTGGAAAAGACTACACGATAAAGGCCCATGCGGAGATGTTTAGAGACATCGGGTGCAACATGTTAGGACCCAACGACGGTGTCCCCGCAGAGGATGGCTTAGAGATGGAGTTAATGGCTATGTACAGTCTGAGGATGAACATGTCATCAAACGACATGATGGCCAGTCGTTTTGGTCAGTCCAACTATGCTAGGTCGAGCTCTAATGGTCAGAAAAGGAAGCGCGACATGCAGCCGTTTGAGACTTATGATCTTAATCGGGATGCCATGGACGCTGCAAATGATCAGATTAGAATCATTGCTAAATGGCCTGATAGAGCTATCCATCGAGAGGATGCGATGGTGCGGGAAGTCATTACGCATATAGAGTTTATTCCGGGCCTTAGTATGGAGGACATCAGTAAATGCGTGATGATAGTGACAGAGAAGGTATTGCTAATGAGAAGCTTCATCAAGATGCCCGATTCGATGTAG

Coding sequence (CDS)

ATGTTTGGAAAAGACTACACGATAAAGGCCCATGCGGAGATGTTTAGAGACATCGGGTGCAACATGTTAGGACCCAACGACGGTGTCCCCGCAGAGGATGGCTTAGAGATGGAGTTAATGGCTATGTACAGTCTGAGGATGAACATGTCATCAAACGACATGATGGCCAGTCGTTTTGGTCAGTCCAACTATGCTAGGTCGAGCTCTAATGGTCAGAAAAGGAAGCGCGACATGCAGCCGTTTGAGACTTATGATCTTAATCGGGATGCCATGGACGCTGCAAATGATCAGATTAGAATCATTGCTAAATGGCCTGATAGAGCTATCCATCGAGAGGATGCGATGGTGCGGGAAGTCATTACGCATATAGAGTTTATTCCGGGCCTTAGTATGGAGGACATCAGTAAATGCGTGATGATAGTGACAGAGAAGGTATTGCTAATGAGAAGCTTCATCAAGATGCCCGATTCGATGTAG

Protein sequence

MFGKDYTIKAHAEMFRDIGCNMLGPNDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFGQSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMVREVITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM*
Homology
[Close]
BLAST of MELO3C005010 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.2e-16
Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGPNDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFG 60
           +FGKD      AE F DIG N     D   A+   + +   MYS  +NMS +D+M +R  
Sbjct: 487 VFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTA 546

Query: 61  QSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMV--RE 120
           + +  R+ S+G KRKR     ++ D+ R A++  N+Q+  IA+WP   + R+DA    +E
Sbjct: 547 RVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWP--ILQRQDATQTRQE 606

Query: 121 VITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM 159
           ++ H+E IP L++ D  + + I+   V  M++F+++PD M
Sbjct: 607 IVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHM 644

[Close]
BLAST of MELO3C005010 vs. TrEMBL
Match: E5GBB1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-10
Identity = 39/126 (30.95%), Postives = 66/126 (52.38%), Query Frame = 1 

Query: 26  NDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFGQSNYARSSSNGQKRKRDMQPFETYD 85
           NDGVP  D  + ++  MYS  ++M SN+M   R  Q++  R+ S+G KRK+  + +E  +
Sbjct: 3   NDGVPLGDSHDQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVE 62

Query: 86  LNRDAMDAANDQIRIIAKWPDRAIHREDAMVREVITHIEFIPGLSMEDISKCVMIVTEKV 145
           + + AM+  NDQ++    W       E  +  EV+  ++ IP L   D +K + I+   V
Sbjct: 63  VIKSAMEFGNDQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDRAKLMQILFRSV 122

Query: 146 LLMRSF 152
             +  F
Sbjct: 123 EAIEGF 128

[Close]
BLAST of MELO3C005010 vs. TrEMBL
Match: A0A0A0M036_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 1 

Query: 4   KDYTIKAHAEMFRDIGCNMLGP-NDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFGQS 63
           KD   +   E+F DI  N+    NDGVP  D  +  ++ MYS  M+MSS++M+ +  GQ+
Sbjct: 25  KDQATEGRLEIFVDIKSNVPNQFNDGVPFGDSHDPNILMMYSQGMDMSSDEMLGTCVGQT 84

Query: 64  NYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIR 100
           +  R++SNG KRK+  Q +E  ++ R+AM+ AND ++
Sbjct: 85  SEGRNTSNGNKRKQGGQYYEMMEVLRNAMEFANDPLK 121

[Close]
BLAST of MELO3C005010 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-08
Identity = 45/157 (28.66%), Postives = 80/157 (50.96%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGPN-DGVPAEDGLEMELMAMYSLRMNMSSNDMMASRF 60
           +FG+D      AE F D+G N  G   D     DG E +   +YS  +++  +D+ ASR 
Sbjct: 452 VFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDILQDDVRASRP 511

Query: 61  GQSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMVREV 120
            +++  ++ S+G KRKR  Q     +    A+D  N+Q+R IA+WP R +  ++ +  E 
Sbjct: 512 SRASEGKTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEF 571

Query: 121 ITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPD 157
              +  +P L+  D +     +  ++  +R F+ MP+
Sbjct: 572 FRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPE 607

[Close]
BLAST of MELO3C005010 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 92.4 bits (228), Expect = 7.5e-16
Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGPNDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFG 60
           +FGKD      AE F DIG N     D   A+   + +   MYS  +NMS +D+M +R  
Sbjct: 487 VFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTA 546

Query: 61  QSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMV--RE 120
           + +  R+ S+G KRKR     ++ D+ R A++  N+Q+  IA+WP   + R+DA    +E
Sbjct: 547 RVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWP--ILQRQDATQTRQE 606

Query: 121 VITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM 159
           ++ H+E IP L++ D  + + I+   V  M++F+++PD M
Sbjct: 607 IVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHM 644

[Close]
BLAST of MELO3C005010 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 9.8e-16
Identity = 50/159 (31.45%), Postives = 85/159 (53.46%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGP-NDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRF 60
           +FG D    AH+E F D G N+    NDGVP  D    +++ +YS  ++MS +++   R 
Sbjct: 92  VFGNDGATGAHSETFADGGSNVSNMFNDGVPLGDSHNQDILTIYSQGVHMSLDEIFGIRA 151

Query: 61  GQSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMVREV 120
           GQ++  R+ S+G KRKR  + +E  ++   A +  NDQ++ I  WP      E  +  EV
Sbjct: 152 GQASERRNYSSGSKRKRGSKHYEMVEVISSATEFGNDQLKTITDWPKEKRATEVELRTEV 211

Query: 121 ITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM 159
           +  ++ IP L  +D +K + I+   V  +  F+ +P  +
Sbjct: 212 VKQLQDIPQLRSQDRAKLMQILFRSVEAIEGFLSIPTKL 250

[Close]
BLAST of MELO3C005010 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 49/159 (30.82%), Postives = 87/159 (54.72%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGP-NDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRF 60
           +FGKD    A +E F ++G N+    ND +P  D  + ++  MYS  ++MS ++M   R 
Sbjct: 135 VFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRA 194

Query: 61  GQSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMVREV 120
           GQ++  R+ S+  KRKR  + +ET ++ R  M+  N+Q++ IA WP      E  M  +V
Sbjct: 195 GQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQV 254

Query: 121 ITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM 159
           +  ++ IP L  +D +K + I+   +  +  F+ +P  +
Sbjct: 255 VKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTEL 293

[Close]
BLAST of MELO3C005010 vs. NCBI nr
Match: gi|659133698|ref|XP_008466863.1| (PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 8.3e-15
Identity = 52/160 (32.50%), Postives = 92/160 (57.50%), Query Frame = 1 

Query: 1   MFGKDYTIKAHAEMFRDIGCNMLGPNDGVPAEDGLEMELMAMYSLRMNMSSNDMMASRFG 60
           +FGKD      AE F +IG N     D   A+   + + + MYS  +NMS +D+M +R  
Sbjct: 339 VFGKDRATGGRAESFANIGSNDPVGYDAFAADVVPDTDFLPMYSPGLNMSPDDLMETRTA 398

Query: 61  QSNYARSSSNGQKRKRDMQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMV--RE 120
           + +  R+ S+G KRKR     ++ D+ R A++  N+Q+  IA+WP   + R+DA    +E
Sbjct: 399 RVSERRNVSSGSKRKRPGHATDSGDIVRIAIEYGNEQLHRIAEWP--ILQRQDATQTRQE 458

Query: 121 VITHIEFIPGLSMEDISKCVMIVTEKVLLMRSFIKMPDSM 159
           ++  +E IP L++ D  + + I+   +  M++F+++PD+M
Sbjct: 459 IVRQLEAIPELTLMDRCRLMHIIMHNIDDMKAFLEVPDNM 496

[Close]
BLAST of MELO3C005010 vs. NCBI nr
Match: gi|659093674|ref|XP_008447655.1| (PREDICTED: casein kinase I-like [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-14
Identity = 39/81 (48.15%), Postives = 58/81 (71.60%), Query Frame = 1 

Query: 78  MQPFETYDLNRDAMDAANDQIRIIAKWPDRAIHREDAMVREVITHIEFIPGLSMEDISKC 137
           MQ F T+ L R+AMD  NDQ+++IA WP+RA  +ED + REVI  ++  P   +E   KC
Sbjct: 1   MQNFVTFMLIRNAMDCVNDQLKVIANWPERASQKEDTLQREVIMQLQSNPQFCVEGSVKC 60

Query: 138 VMIVTEKVLLMRSFIKMPDSM 159
           +M+VT+K+LLM++F+ +PD M
Sbjct: 61  MMVVTQKLLLMKTFLDLPDEM 81

The following BLAST results are available for this feature:
BLAST of MELO3C005010 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME5.2e-1634.38Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GBB1_CUCME3.3e-1030.95Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0M036_CUCSA1.2e-0939.18Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1[more]
E5GBB2_CUCME5.2e-0828.66Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C005010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136287|gb|ADN34114.1|7.5e-1634.38retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659113923|ref|XP_008456820.1|9.8e-1631.45PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo][more]
gi|659082641|ref|XP_008441954.1|1.3e-1530.82PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659133698|ref|XP_008466863.1|8.3e-1532.50PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo][more]
gi|659093674|ref|XP_008447655.1|2.4e-1448.15PREDICTED: casein kinase I-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005010T1MELO3C005010T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005010Cucumber (Gy14) v2cgybmeB010
MELO3C005010Silver-seed gourdcarmeB0449
MELO3C005010Cucumber (Chinese Long) v3cucmeB010
MELO3C005010Watermelon (97103) v2mewmbB153
MELO3C005010Wax gourdmewgoB174
MELO3C005010Melon (DHL92) v3.5.1memeB037
MELO3C005010Cucumber (Gy14) v1cgymeB374
MELO3C005010Cucurbita maxima (Rimu)cmameB194
MELO3C005010Cucurbita maxima (Rimu)cmameB391
MELO3C005010Cucurbita moschata (Rifu)cmomeB181
MELO3C005010Cucurbita moschata (Rifu)cmomeB382
MELO3C005010Wild cucumber (PI 183967)cpimeB011
MELO3C005010Cucumber (Chinese Long) v2cumeB015
MELO3C005010Watermelon (Charleston Gray)mewcgB149
MELO3C005010Watermelon (97103) v1mewmB146
MELO3C005010Cucurbita pepo (Zucchini)cpemeB490
MELO3C005010Bottle gourd (USVL1VR-Ls)lsimeB174