MELO3C005009.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C005009.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOB domain-containing protein 1
Locationchr12 : 4697972 .. 4699435 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCAACTTATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGTACTTCCTTAATCCCAATTTTCTGTTTCTCTTTCAAATTTCGCGTGTTATCTTCTTGTTTCTAGGTTTAGAGATTATGGATTCCGTTCTGGAAATTGAAATTTGACCTTAAAAACTTAACGAAAAACCATCGCATTAGTTTGGGAATTCTGTTTGAGCAATTAAAGTCATCTCTGGCTGGAATGAAGTTAGTACTGAAATTGATCAAACGAAATCCTAATAATCTATGAAGAATTCACAATCCTATTCTGTTTAATTGCTTTTTCTTGATGAAAATTTGAAGCTATAATATTCAAGCATCATGTAAATTAGTAGAATCAAATGAAAGCACCCCAACTGTTTGATTAATGTCCTCACAGAACAACCCATCATATTAATCGCTTTATTGAATTCTTCAGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGAAAAAGAAAAAGAGAAACTTGAGATTTCTAAGACAAAGGTTTTGGGAAGTCAAAGTTGGATTGGTTTTTAGTAGAACATATGAAAGTTAAGTAGTTGAATATCGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAAAAGTGGAGTGAAGAAAAAGGACTGATGGTTACTAGAGACTAGATTAGTGCGAAATATATTATATCTTAGTATATATCTTCTTCTTCTTTTTTTTTCTTTTTTTGGTTACCTACCATTAACTTCTTAACATTGATGTGTGAAGAAAAGGAACATATTTGTCAAAACATTTTGA

mRNA sequence

ATTTCAACTTATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGAAAAAGAAAAAGAGAAACTTGAGATTTCTAAGACAAAGGTTTTGGGAAGTCAAAGTTGGATTGGTTTTTAGTAGAACATATGAAAGTTAAGTAGTTGAATATCGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAAAAGTGGAGTGAAGAAAAAGGACTGATGGTTACTAGAGACTAGATTAGTGCGAAATATATTATATCTTAGTATATATCTTCTTCTTCTTTTTTTTTCTTTTTTTGGTTACCTACCATTAACTTCTTAACATTGATGTGTGAAGAAAAGGAACATATTTGTCAAAACATTTTGA

Coding sequence (CDS)

ATGACGTCATCTCTTCTTCTTCATTTCGTCTCTATATATATTATATTCTTCATTCTTCTTCACAGCCAAAACCAACTTCATTTCTCTCTTTCTACCCAGTCTAAAATGGAGTCTAGGGAGGTAAAATCCAGCCCGACTTCAACACTCCTTTCTCAGTCCCCGTCGCCGTCTCCTTCACCGCCCCCGACTGTTCAGGCCCCCGTGGTGGTCAGTCCATGTGCGGCGTGCAAGATTCTGCGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTCAAGTTCACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCTGGATCTTCCAGATTCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCACCACCGATGTCATCATTGTCGCTCCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGA

Protein sequence

MTSSLLLHFVSIYIIFFILLHSQNQLHFSLSTQSKMESREVKSSPTSTLLSQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT
Homology
[Close]
BLAST of MELO3C005009.2 vs. NCBI nr
Match: XP_008463550.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89
Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 0 

Query: 36  MESREVKSSPTXXXXXXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MESREVKSSPT    XXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP
Sbjct: 1   MESREVKSSPTSTLLXXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ
Sbjct: 61  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 120

Query: 156 KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI
Sbjct: 121 KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
           ATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 181 ATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]
BLAST of MELO3C005009.2 vs. NCBI nr
Match: XP_004147299.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 3.7e-79
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0 

Query: 65  QAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 124
           QA VVV+PCAACKILRRRC +KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ
Sbjct: 33  QAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQ 92

Query: 125 RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVA 184
           RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVA
Sbjct: 93  RADAVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVA 152

Query: 185 LICKELAQTPPPMSSLSLLPDHRSLDNNFNI-ATPQSYQGYTSLFEDSNIWDPLWT 240
           LICKELAQTPPPMSS SLLP+HRSLDN+FNI ATPQSYQGYTSLF DSNIWDPLWT
Sbjct: 153 LICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 208

[Close]
BLAST of MELO3C005009.2 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 151/174 (86.78%), Postives = 156/174 (89.66%), Query Frame = 0 

Query: 66  APVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQR 125
           A VVVSPCAACKILRRRCAEKCVLAPYFPPSDP KFTIAHR+FGASNIIKLL DLP+SQR
Sbjct: 32  AGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQR 91

Query: 126 ADAVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVAL 185
           ADAVSSLVYEASARIRDPVYGCAGAICQLQKQIN XXXXXXXXXXXX   HCHQ +LVAL
Sbjct: 92  ADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEXXXXXXXXXXXXVNMHCHQASLVAL 151

Query: 186 ICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
           ICKELAQTPPP+      PDHRSLDNNFNIATPQSYQ YT   EDSNIW+PLWT
Sbjct: 152 ICKELAQTPPPVPP----PDHRSLDNNFNIATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]
BLAST of MELO3C005009.2 vs. NCBI nr
Match: KGN64755.1 (hypothetical protein Csa_1G088450 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 1.0e-68
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 86  KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY 145
           KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY
Sbjct: 11  KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY 70

Query: 146 GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPD 205
           GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSS SLLP+
Sbjct: 71  GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSSSLLPE 130

Query: 206 HRSLDNNFNI-ATPQSYQGYTSLFEDSNIWDPLWT 240
           HRSLDN+FNI ATPQSYQGYTSLF DSNIWDPLWT
Sbjct: 131 HRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

[Close]
BLAST of MELO3C005009.2 vs. NCBI nr
Match: XP_022998902.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 143/204 (70.10%), Postives = 150/204 (73.53%), Query Frame = 0 

Query: 36  MESREVKSSPTXXXXXXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           ME  + KS PT          XXXXXX  QA VVV+PCAACKILRRRCAEKCVLAPYFPP
Sbjct: 1   MECSDAKSGPT-STILRSQSPXXXXXXCVQAGVVVTPCAACKILRRRCAEKCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           SDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGAIC LQ
Sbjct: 61  SDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICHLQ 120

Query: 156 KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           KQIN                 CHQ NLVALICKEL QTP P       PDH SLDNNF+ 
Sbjct: 121 KQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPP----PDHCSLDNNFST 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
           ATPQSY     LF+DSNIW+ LWT
Sbjct: 181 ATPQSY----PLFDDSNIWEALWT 195

[Close]
BLAST of MELO3C005009.2 vs. TAIR10
Match: AT1G07900.1 (LOB domain-containing protein 1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-39
Identity = 103/172 (59.88%), Postives = 119/172 (69.19%), Query Frame = 0 

Query: 68  VVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRAD 127
           VV+SPCAACKILRRRCAE+CVLAPYFPP+DP KFTIAHR+FGASNIIK L +LP+SQR D
Sbjct: 29  VVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 88

Query: 128 AVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALIC 187
           AV+S+VYEA ARIRDPVYGCAGAI  LQ+   XXXXXXXXXXXXXXXX      L+ LI 
Sbjct: 89  AVNSMVYEAEARIRDPVYGCAGAIYHLQRXXXXXXXXXXXXXXXXXXXXXXXXXLLELIY 148

Query: 188 KELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
               Q      ++S         N+      +S    + L+     WDPLWT
Sbjct: 149 NMDQQQKQEQDNMSF------ESNDLGFLEDKSNTNSSMLW-----WDPLWT 189

[Close]
BLAST of MELO3C005009.2 vs. TAIR10
Match: AT2G28500.1 (LOB domain-containing protein 11)

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 70  VSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAV 129
           +SPCAACKILRRRCA+KCVLAPYFPP+DP KFTIAHR+FGASNIIK L +LP+SQR DAV
Sbjct: 53  LSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 112

Query: 130 SSLVYEASARIRDPVYGCAGAICQLQKQI 159
           +S+VYEA AR+RDPVYGCAGAI  LQ+Q+
Sbjct: 113 NSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

[Close]
BLAST of MELO3C005009.2 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.3e-33
Identity = 60/89 (67.42%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQIN 160
           SLV+EA+AR+RDPVYGC GAI  LQ Q++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVS 95

[Close]
BLAST of MELO3C005009.2 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 134.4 bits (337), Expect = 9.1e-32
Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQIN 160
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQID 100

[Close]
BLAST of MELO3C005009.2 vs. TAIR10
Match: AT2G40470.1 (LOB domain-containing protein 15)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-31
Identity = 55/89 (61.80%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 70  VSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAV 129
           ++PCAACK+LRRRCA++C  +PYF P +P KF   H++FGASN+ K+L+++P+SQRADA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 130 SSLVYEASARIRDPVYGCAGAICQLQKQI 159
           +SLVYEA+ R+RDPVYGC GAI  LQ+Q+
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQV 131

[Close]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match: sp|Q9LQR0|LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.1e-38
Identity = 103/172 (59.88%), Postives = 119/172 (69.19%), Query Frame = 0 

Query: 68  VVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRAD 127
           VV+SPCAACKILRRRCAE+CVLAPYFPP+DP KFTIAHR+FGASNIIK L +LP+SQR D
Sbjct: 29  VVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 88

Query: 128 AVSSLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALIC 187
           AV+S+VYEA ARIRDPVYGCAGAI  LQ+   XXXXXXXXXXXXXXXX      L+ LI 
Sbjct: 89  AVNSMVYEAEARIRDPVYGCAGAIYHLQRXXXXXXXXXXXXXXXXXXXXXXXXXLLELIY 148

Query: 188 KELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
               Q      ++S         N+      +S    + L+     WDPLWT
Sbjct: 149 NMDQQQKQEQDNMSF------ESNDLGFLEDKSNTNSSMLW-----WDPLWT 189

[Close]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match: sp|Q9SK08|LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 4.0e-37
Identity = 71/89 (79.78%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 70  VSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAV 129
           +SPCAACKILRRRCA+KCVLAPYFPP+DP KFTIAHR+FGASNIIK L +LP+SQR DAV
Sbjct: 53  LSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 112

Query: 130 SSLVYEASARIRDPVYGCAGAICQLQKQI 159
           +S+VYEA AR+RDPVYGCAGAI  LQ+Q+
Sbjct: 113 NSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

[Close]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 60/89 (67.42%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQIN 160
           SLV+EA+AR+RDPVYGC GAI  LQ Q++
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVS 95

[Close]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQIN 160
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQID 100

[Close]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match: sp|Q8L5T5|LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 55/89 (61.80%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 70  VSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAV 129
           ++PCAACK+LRRRCA++C  +PYF P +P KF   H++FGASN+ K+L+++P+SQRADA 
Sbjct: 43  ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query: 130 SSLVYEASARIRDPVYGCAGAICQLQKQI 159
           +SLVYEA+ R+RDPVYGC GAI  LQ+Q+
Sbjct: 103 NSLVYEANVRLRDPVYGCMGAISALQQQV 131

[Close]
BLAST of MELO3C005009.2 vs. TrEMBL
Match: tr|A0A1S3CK12|A0A1S3CK12_CUCME (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89
Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 0 

Query: 36  MESREVKSSPTXXXXXXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 95
           MESREVKSSPT    XXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP
Sbjct: 1   MESREVKSSPTSTLLXXXXXXXXXXXXXXQAPVVVSPCAACKILRRRCAEKCVLAPYFPP 60

Query: 96  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 155
           SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ
Sbjct: 61  SDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 120

Query: 156 KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 215
           KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI
Sbjct: 121 KQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI 180

Query: 216 ATPQSYQGYTSLFEDSNIWDPLWT 240
           ATPQSYQGYTSLFEDSNIWDPLWT
Sbjct: 181 ATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]
BLAST of MELO3C005009.2 vs. TrEMBL
Match: tr|A0A0A0LS55|A0A0A0LS55_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088450 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.6e-69
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 86  KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY 145
           KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY
Sbjct: 11  KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVY 70

Query: 146 GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSLSLLPD 205
           GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSS SLLP+
Sbjct: 71  GCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELAQTPPPMSSSSLLPE 130

Query: 206 HRSLDNNFNI-ATPQSYQGYTSLFEDSNIWDPLWT 240
           HRSLDN+FNI ATPQSYQGYTSLF DSNIWDPLWT
Sbjct: 131 HRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

[Close]
BLAST of MELO3C005009.2 vs. TrEMBL
Match: tr|A0A0A0LUS4|A0A0A0LUS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.3e-52
Identity = 105/170 (61.76%), Postives = 124/170 (72.94%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACKILRRRC E C L PYFP  +PLKFTIAHR+FGASNIIKLL DLP+SQR DAV+
Sbjct: 20  SPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGASNIIKLLQDLPESQRGDAVN 79

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKEL 190
           S+VYEASARIRDP+YGCAG+I  LQ+QIN                HC Q NL+ LI KEL
Sbjct: 80  SMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAEVLRMHCQQANLMTLIWKEL 139

Query: 191 AQTP-PPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
            Q P PPM       DH+SL++ +NIA+PQSY  Y+ LFE+ N+ +P+WT
Sbjct: 140 GQVPQPPMH------DHQSLNDPYNIASPQSYHSYSYLFEECNVLEPMWT 183

[Close]
BLAST of MELO3C005009.2 vs. TrEMBL
Match: tr|A0A1S3CK31|A0A1S3CK31_CUCME (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 103/168 (61.31%), Postives = 120/168 (71.43%), Query Frame = 0 

Query: 72  PCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSS 131
           PCAACKILRRRC E C L PYFPP +PLKFTIAHR+FGASNIIKLL +LP SQRADAV+S
Sbjct: 21  PCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGASNIIKLLQNLPKSQRADAVNS 80

Query: 132 LVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKELA 191
           +VYEASARIRDP+YGCAG+I  LQ+QIN                HC Q NL+ LICKEL 
Sbjct: 81  MVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAEVLRMHCQQANLMTLICKELG 140

Query: 192 QTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 240
           Q P P       P H    +++NIA+PQ Y  Y+ LFE+SN+ +PLWT
Sbjct: 141 QMPEP-------PMH----DHYNIASPQGYYSYSYLFEESNVLEPLWT 177

[Close]
BLAST of MELO3C005009.2 vs. TrEMBL
Match: tr|A0A1Q3B2A5|A0A1Q3B2A5_CEPFO (DUF260 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05614 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.1e-50
Identity = 120/172 (69.77%), Postives = 138/172 (80.23%), Query Frame = 0 

Query: 71  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 130
           SPCAACKILRRRCA+KCVLAPYFPP++P KFTIAHR+FGASNIIK L +LP+SQRADAVS
Sbjct: 45  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 104

Query: 131 SLVYEASARIRDPVYGCAGAICQLQKQINXXXXXXXXXXXXXXXXHCHQTNLVALICKEL 190
           S+VYEASARIRDPVYGCAGAICQLQKQ+N XXXXXXXXXXXXXXX   QTNLVAL+C E+
Sbjct: 105 SMVYEASARIRDPVYGCAGAICQLQKQVNEXXXXXXXXXXXXXXXXXQQTNLVALLCMEM 164

Query: 191 AQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSN---IWDPLWT 240
           AQ+P P+         +S+DN   I  P SY       +D+N   +W+PLWT
Sbjct: 165 AQSPQPIY-------QQSVDN--IITNPPSYHSTPCFIDDNNMGSLWEPLWT 207

The following BLAST results are available for this feature:
BLAST of MELO3C005009.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463550.12.3e-8998.04PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
XP_004147299.13.7e-7994.89PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
XP_022157927.11.1e-7286.78LOB domain-containing protein 11-like [Momordica charantia][more]
KGN64755.11.0e-6896.77hypothetical protein Csa_1G088450 [Cucumis sativus][more]
XP_022998902.13.9e-6570.10LOB domain-containing protein 1-like [Cucurbita maxima][more]
BLAST of MELO3C005009.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07900.14.5e-3959.88LOB domain-containing protein 1[more]
AT2G28500.12.2e-3879.78LOB domain-containing protein 11[more]
AT2G30130.16.3e-3367.42Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.19.1e-3267.42LOB domain-containing protein 4[more]
AT2G40470.15.9e-3161.80LOB domain-containing protein 15[more]
BLAST of MELO3C005009.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LQR0|LBD1_ARATH8.1e-3859.88LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
sp|Q9SK08|LBD11_ARATH4.0e-3779.78LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S... [more]
sp|Q8LBW3|LBD12_ARATH1.1e-3167.42LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
sp|Q9SHE9|LBD4_ARATH1.6e-3067.42LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
sp|Q8L5T5|LBD15_ARATH1.1e-2961.80LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
BLAST of MELO3C005009.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CK12|A0A1S3CK12_CUCME1.5e-8998.04LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=... [more]
tr|A0A0A0LS55|A0A0A0LS55_CUCSA6.6e-6996.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088450 PE=4 SV=1[more]
tr|A0A0A0LUS4|A0A0A0LUS4_CUCSA3.3e-5261.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088440 PE=4 SV=1[more]
tr|A0A1S3CK31|A0A1S3CK31_CUCME1.1e-5061.31LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501684 PE=... [more]
tr|A0A1Q3B2A5|A0A1Q3B2A5_CEPFO3.1e-5069.77DUF260 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005009.2.1MELO3C005009.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..65
NoneNo IPR availablePANTHERPTHR31301:SF6LOB DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 43..239
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 43..239
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 72..169
e-value: 3.1E-40
score: 136.6
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 71..172
score: 26.426

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005009.2Cucumber (Gy14) v2cgybmedB009
MELO3C005009.2Cucumber (Gy14) v1cgymedB371
MELO3C005009.2Cucurbita maxima (Rimu)cmamedB215
MELO3C005009.2Cucurbita maxima (Rimu)cmamedB451
MELO3C005009.2Cucurbita maxima (Rimu)cmamedB640
MELO3C005009.2Cucurbita moschata (Rifu)cmomedB203
MELO3C005009.2Cucurbita moschata (Rifu)cmomedB439
MELO3C005009.2Cucurbita moschata (Rifu)cmomedB628
MELO3C005009.2Cucurbita pepo (Zucchini)cpemedB314
MELO3C005009.2Cucurbita pepo (Zucchini)cpemedB581
MELO3C005009.2Wild cucumber (PI 183967)cpimedB011
MELO3C005009.2Cucumber (Chinese Long) v2cumedB010
MELO3C005009.2Melon (DHL92) v3.6.1medmedB034
MELO3C005009.2Bottle gourd (USVL1VR-Ls)lsimedB064
MELO3C005009.2Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C005009.2Watermelon (Charleston Gray)medwcgB140
MELO3C005009.2Watermelon (Charleston Gray)medwcgB141
MELO3C005009.2Watermelon (97103) v1medwmB143
MELO3C005009.2Watermelon (97103) v1medwmB174
MELO3C005009.2Silver-seed gourdcarmedB0451
MELO3C005009.2Cucumber (Chinese Long) v3cucmedB009
MELO3C005009.2Watermelon (97103) v2medwmbB142
MELO3C005009.2Watermelon (97103) v2medwmbB140
MELO3C005009.2Wax gourdmedwgoB156
MELO3C005009.2Wax gourdmedwgoB176