MELO3C004970 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004970
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	High-affinity nitrate transporter
Location	chr12 : 5370807 .. 5371786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATGTTGAAGGTTCTCCAGGAAGCTCAATGCATGGAGTGACTGGAAGAGAACAAACCTTTGCATTCTCTGTAGCTTCCCCGATCGTCCCAACTGACACGACCGCTAAATTTGCATTACCGGTCGACTCGGAGCATAAAGCTAAGGTTTTCAGGCTATGGTCTTTAGCCAACCCCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGAACGTGGTAGGCGTGTTGCTTCAGCTCCAACTCCACCAAATACAACTCCTTCTCATGTTTGA

mRNA sequence

ATGGGTGATGTTGAAGGTTCTCCAGGAAGCTCAATGCATGGAGTGACTGGAAGAGAACAAACCTTTGCATTCTCTGTAGCTTCCCCGATCGTCCCAACTGACACGACCGCTAAATTTGCATTACCGGTCGACTCGGAGCATAAAGCTAAGGTTTTCAGGCTATGGCGTGTTGCTTCAGCTCCAACTCCACCAAATACAACTCCTTCTCATGTTTGA

Coding sequence (CDS)

ATGGGTGATGTTGAAGGTTCTCCAGGAAGCTCAATGCATGGAGTGACTGGAAGAGAACAAACCTTTGCATTCTCTGTAGCTTCCCCGATCGTCCCAACTGACACGACCGCTAAATTTGCATTACCGGTCGACTCGGAGCATAAAGCTAAGGTTTTCAGGCTATGGCGTGTTGCTTCAGCTCCAACTCCACCAAATACAACTCCTTCTCATGTTTGA

Protein sequence

MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVASAPTPPNTTPSHV*

Homology

[Close]

BLAST of MELO3C004970 vs. Swiss-Prot
Match: NRT21_ARATH (High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana GN=NRT2.1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-17
Identity = 44/58 (75.86%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVA 59
          MGD  G PGSSMHGVTGREQ+FAFSV SPIV TD TAKF LPVD+EHKA VF+L+  A
Sbjct: 1  MGDSTGEPGSSMHGVTGREQSFAFSVQSPIVHTDKTAKFDLPVDTEHKATVFKLFSFA 58

[Close]

BLAST of MELO3C004970 vs. Swiss-Prot
Match: NRT24_ARATH (High affinity nitrate transporter 2.4 OS=Arabidopsis thaliana GN=NRT2.4 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-16
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRL 55
          M D  G PGSSMHGVTGREQ++AFSV SP VP+D++AKF+LPVD+EHKAKVF+L
Sbjct: 1  MADGFGEPGSSMHGVTGREQSYAFSVESPAVPSDSSAKFSLPVDTEHKAKVFKL 54

[Close]

BLAST of MELO3C004970 vs. Swiss-Prot
Match: NRT23_ARATH (High affinity nitrate transporter 2.3 OS=Arabidopsis thaliana GN=NRT2.3 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.6e-10
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 1


Query: 5  EGSPGSSMHGVTGREQTFAFSV---ASPIVPTDTTAKFALPVDSEHKAKVF 53
          EGS G+S+HGVT REQ F+FSV   +  +   D TAKFALPVDSEH+AKVF
Sbjct: 9  EGSIGTSLHGVTAREQVFSFSVDASSQTVQSDDPTAKFALPVDSEHRAKVF 59

[Close]

BLAST of MELO3C004970 vs. Swiss-Prot
Match: NRT26_ARATH (High affinity nitrate transporter 2.6 OS=Arabidopsis thaliana GN=NRT2.6 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1


Query: 5  EGSPGSSMHGVTGREQTFAFSVASPIVPT------DTTAKFALPVDSEHKAKVFR 54
          +GS G+S+HGVT REQ F+FSV   +  +      D TAKFALPVDSEH+AKVF+
Sbjct: 9  DGSIGTSLHGVTAREQVFSFSVQEDVPSSQAVRTNDPTAKFALPVDSEHRAKVFK 63

[Close]

BLAST of MELO3C004970 vs. Swiss-Prot
Match: NRT22_ARATH (High-affinity nitrate transporter 2.2 OS=Arabidopsis thaliana GN=NRT2.2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVA 59
          MG  +  PGSSMHGVTGREQ++AFSV     PT+T  K+ LPVD+E KA VF+L+  A
Sbjct: 1  MGSTD-EPGSSMHGVTGREQSYAFSVDGS-EPTNTKKKYNLPVDAEDKATVFKLFSFA 56

[Close]

BLAST of MELO3C004970 vs. TrEMBL
Match: Q6PRP8_CUCSA (High-affinity nitrate transporter OS=Cucumis sativus GN=NRT2 PE=2 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. TrEMBL
Match: Q6PRP8_CUCSA (High-affinity nitrate transporter OS=Cucumis sativus GN=NRT2 PE=2 SV=3)

HSP 1 Score: 34.7 bits (78), Expect = 5.8e+01
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1


Query: 56  RVASAPTPPNTTPSHV 72
           RVASAPTPPNTTPS V
Sbjct: 515 RVASAPTPPNTTPSRV 530

HSP 2 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. TrEMBL
Match: S4VM42_CUCSA (High-affinity nitrate transporter NRT2.2 OS=Cucumis sativus GN=NRT2.2 PE=2 SV=1)

HSP 1 Score: 36.6 bits (83), Expect = 1.5e+01
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1


Query: 56  RVASAPTPPNTTPSHV 72
           RVASAPTPPNTTP+HV
Sbjct: 515 RVASAPTPPNTTPTHV 530

HSP 2 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. TrEMBL
Match: A0A0A0LXS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097690 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. TrEMBL
Match: B9SCG8_RICCO (Nitrate transporter, putative OS=Ricinus communis GN=RCOM_0472320 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-21
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGD+EGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKF LPVDSEHKAKVF+L+  A+
Sbjct: 1  MGDIEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFDLPVDSEHKAKVFKLFSFAN 59

[Close]

BLAST of MELO3C004970 vs. TAIR10
Match: AT1G08090.1 (AT1G08090.1 nitrate transporter 2:1)

HSP 1 Score: 89.7 bits (221), Expect = 7.7e-19
Identity = 44/58 (75.86%), Postives = 46/58 (79.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVA 59
          MGD  G PGSSMHGVTGREQ+FAFSV SPIV TD TAKF LPVD+EHKA VF+L+  A
Sbjct: 1  MGDSTGEPGSSMHGVTGREQSFAFSVQSPIVHTDKTAKFDLPVDTEHKATVFKLFSFA 58

[Close]

BLAST of MELO3C004970 vs. TAIR10
Match: AT5G60770.1 (AT5G60770.1 nitrate transporter 2.4)

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-18
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRL 55
          M D  G PGSSMHGVTGREQ++AFSV SP VP+D++AKF+LPVD+EHKAKVF+L
Sbjct: 1  MADGFGEPGSSMHGVTGREQSYAFSVESPAVPSDSSAKFSLPVDTEHKAKVFKL 54

[Close]

BLAST of MELO3C004970 vs. TAIR10
Match: AT5G60780.1 (AT5G60780.1 nitrate transporter 2.3)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-11
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 1


Query: 5  EGSPGSSMHGVTGREQTFAFSV---ASPIVPTDTTAKFALPVDSEHKAKVF 53
          EGS G+S+HGVT REQ F+FSV   +  +   D TAKFALPVDSEH+AKVF
Sbjct: 9  EGSIGTSLHGVTAREQVFSFSVDASSQTVQSDDPTAKFALPVDSEHRAKVF 59

[Close]

BLAST of MELO3C004970 vs. TAIR10
Match: AT3G45060.1 (AT3G45060.1 high affinity nitrate transporter 2.6)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-11
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1


Query: 5  EGSPGSSMHGVTGREQTFAFSVASPIVPT------DTTAKFALPVDSEHKAKVFR 54
          +GS G+S+HGVT REQ F+FSV   +  +      D TAKFALPVDSEH+AKVF+
Sbjct: 9  DGSIGTSLHGVTAREQVFSFSVQEDVPSSQAVRTNDPTAKFALPVDSEHRAKVFK 63

[Close]

BLAST of MELO3C004970 vs. TAIR10
Match: AT1G08100.1 (AT1G08100.1 nitrate transporter 2.2)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-10
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVA 59
          MG  +  PGSSMHGVTGREQ++AFSV     PT+T  K+ LPVD+E KA VF+L+  A
Sbjct: 1  MGSTD-EPGSSMHGVTGREQSYAFSVDGS-EPTNTKKKYNLPVDAEDKATVFKLFSFA 56

[Close]

BLAST of MELO3C004970 vs. NCBI nr
Match: gi|566006096|ref|NP_001274401.1| (high affinity nitrate transporter 2.4-like [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. NCBI nr
Match: gi|566006096|ref|NP_001274401.1| (high affinity nitrate transporter 2.4-like [Cucumis sativus])

HSP 1 Score: 34.7 bits (78), Expect = 8.4e+01
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1


Query: 56  RVASAPTPPNTTPSHV 72
           RVASAPTPPNTTPS V
Sbjct: 515 RVASAPTPPNTTPSRV 530

HSP 2 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. NCBI nr
Match: gi|530788334|ref|NP_001269063.1| (high affinity nitrate transporter 2.4-like [Cucumis sativus])

HSP 1 Score: 36.6 bits (83), Expect = 2.2e+01
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1


Query: 56  RVASAPTPPNTTPSHV 72
           RVASAPTPPNTTP+HV
Sbjct: 515 RVASAPTPPNTTPTHV 530

HSP 2 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. NCBI nr
Match: gi|700209694|gb|KGN64790.1| (hypothetical protein Csa_1G097685 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

[Close]

BLAST of MELO3C004970 vs. NCBI nr
Match: gi|778655167|ref|XP_011660054.1| (PREDICTED: high affinity nitrate transporter 2.4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-23
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 1


Query: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRLWRVAS 60
          MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFR+W +A+
Sbjct: 1  MGDVEGSPGSSMHGVTGREQTFAFSVASPIVPTDTTAKFALPVDSEHKAKVFRIWSLAN 59

The following BLAST results are available for this feature:

BLAST of MELO3C004970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NRT21_ARATH	1.4e-17	75.86	High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana GN=NRT2.1 PE=1 SV=...	[more]
NRT24_ARATH	1.2e-16	74.07	High affinity nitrate transporter 2.4 OS=Arabidopsis thaliana GN=NRT2.4 PE=2 SV=...	[more]
NRT23_ARATH	3.6e-10	64.71	High affinity nitrate transporter 2.3 OS=Arabidopsis thaliana GN=NRT2.3 PE=1 SV=...	[more]
NRT26_ARATH	1.1e-09	58.18	High affinity nitrate transporter 2.6 OS=Arabidopsis thaliana GN=NRT2.6 PE=1 SV=...	[more]
NRT22_ARATH	1.8e-09	58.62	High-affinity nitrate transporter 2.2 OS=Arabidopsis thaliana GN=NRT2.2 PE=2 SV=...	[more]

BLAST of MELO3C004970 vs. TrEMBL


Match Name	E-value	Identity	Description
Q6PRP8_CUCSA	1.5e-23	93.22	High-affinity nitrate transporter OS=Cucumis sativus GN=NRT2 PE=2 SV=3	[more]
Q6PRP8_CUCSA	5.8e+01	93.75	High-affinity nitrate transporter OS=Cucumis sativus GN=NRT2 PE=2 SV=3	[more]
S4VM42_CUCSA	1.5e+01	93.75	High-affinity nitrate transporter NRT2.2 OS=Cucumis sativus GN=NRT2.2 PE=2 SV=1	[more]
A0A0A0LXS3_CUCSA	1.5e-23	93.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097690 PE=4 SV=1	[more]
B9SCG8_RICCO	3.2e-21	88.14	Nitrate transporter, putative OS=Ricinus communis GN=RCOM_0472320 PE=4 SV=1	[more]

BLAST of MELO3C004970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08090.1	7.7e-19	75.86	nitrate transporter 2:1	[more]
AT5G60770.1	6.6e-18	74.07	nitrate transporter 2.4	[more]
AT5G60780.1	2.0e-11	64.71	nitrate transporter 2.3	[more]
AT3G45060.1	5.9e-11	58.18	high affinity nitrate transporter 2.6	[more]
AT1G08100.1	1.0e-10	58.62	nitrate transporter 2.2	[more]

BLAST of MELO3C004970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|566006096\|ref\|NP_001274401.1\|	2.2e-23	93.22	high affinity nitrate transporter 2.4-like [Cucumis sativus]	[more]
gi\|566006096\|ref\|NP_001274401.1\|	8.4e+01	93.75	high affinity nitrate transporter 2.4-like [Cucumis sativus]	[more]
gi\|530788334\|ref\|NP_001269063.1\|	2.2e+01	93.75	high affinity nitrate transporter 2.4-like [Cucumis sativus]	[more]
gi\|700209694\|gb\|KGN64790.1\|	2.2e-23	93.22	hypothetical protein Csa_1G097685 [Cucumis sativus]	[more]
gi\|778655167\|ref\|XP_011660054.1\|	2.2e-23	93.22	PREDICTED: high affinity nitrate transporter 2.4-like isoform X1 [Cucumis sativu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004970T1	MELO3C004970T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23515	FAMILY NOT NAMED	coord: 1..58 score: 4.7
None	No IPR available	PANTHER	PTHR23515:SF2	HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED	coord: 1..58 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004970	Csa1G097690	Cucumber (Chinese Long) v2	cumeB015
MELO3C004970	Cla005079	Watermelon (97103) v1	mewmB146
MELO3C004970	ClCG03G002620	Watermelon (Charleston Gray)	mewcgB149
MELO3C004970	Cla97C03G053680	Watermelon (97103) v2	mewmbB153
MELO3C004970	Bhi08G000220	Wax gourd	mewgoB174
MELO3C004970	CSPI01G13180	Wild cucumber (PI 183967)	cpimeB011
MELO3C004970	CmaCh13G002290	Cucurbita maxima (Rimu)	cmameB194
MELO3C004970	CmoCh13G002320	Cucurbita moschata (Rifu)	cmomeB181
MELO3C004970	Cp4.1LG20g07110	Cucurbita pepo (Zucchini)	cpemeB480
MELO3C004970	CsGy1G013300	Cucumber (Gy14) v2	cgybmeB010
MELO3C004970	CsaV3_1G013360	Cucumber (Chinese Long) v3	cucmeB010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004970	Cucumber (Gy14) v1	cgymeB374
MELO3C004970	Cucurbita maxima (Rimu)	cmameB391
MELO3C004970	Cucurbita moschata (Rifu)	cmomeB382
MELO3C004970	Cucurbita pepo (Zucchini)	cpemeB490
MELO3C004970	Silver-seed gourd	carmeB0449
MELO3C004970	Silver-seed gourd	carmeB1038