MELO3C004965.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004965.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptioncharged multivesicular body protein 5-like
Locationchr12 : 5578092 .. 5578993 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGATTTGTGTTGCCTATAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGGTAAGATTACTGCATTTTAGCTCAGTGTCGATGAAATATATGGTACCTTAGTAATCTTACATTGTGCCTACGTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAACAGGATCCAATTTCTGAGTCAATAATCATGAACTTATTCGTTTTAGAAACGATTGTGAAATGAATATTACTTAGATTTACAGGATGCATGCTAATGCCAACACCCTTTTTTTTCTCTTTCTTGAGAAAATTACTGTATAGTTCAACATGAATTATGCATATGCATCTATTAACATGAAGTTACACATCTGTCGTCTGTTCAAGAGAATGTCAGAATTCGTCGGTTCTAAATTACACAGTGTTATTGATATGGTTTAATTTTACCTTCACACCTTCGGCACTTTTACATGCATTGATTCTTTTTTTCCGCTTAATTTGATGGGCAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

mRNA sequence

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Coding sequence (CDS)

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Protein sequence

MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG
Homology
[Close]
BLAST of MELO3C004965.2 vs. NCBI nr
Match: XP_008463129.1 (PREDICTED: charged multivesicular body protein 5-like [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 1.4e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 121 GLPAVPRASLRG 132

[Close]
BLAST of MELO3C004965.2 vs. NCBI nr
Match: XP_008446740.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. NCBI nr
Match: XP_004135046.1 (PREDICTED: charged multivesicular body protein 5 [Cucumis sativus] >KGN52171.1 hypothetical protein Csa_5G613490 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 7.7e-63
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. NCBI nr
Match: XP_022957074.1 (vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985353.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita maxima] >XP_023529845.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60
Identity = 125/132 (94.70%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETE DGVPSYLQPDKES+ EGELNLP+AP GHAAVPAGR NAQAEDEL
Sbjct: 166 GELDALEADMGFETETDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. NCBI nr
Match: XP_023541762.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 6.1e-60
Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+ EGELNLP+AP G AAVPAGR NAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. TAIR10
Match: AT3G10640.1 (SNF7 family protein)

HSP 1 Score: 207.2 bits (526), Expect = 6.1e-54
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]
BLAST of MELO3C004965.2 vs. TAIR10
Match: AT5G04850.2 (SNF7 family protein)

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-49
Identity = 111/169 (65.68%), Postives = 118/169 (69.82%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  G-------------------------------------ELDALEADMGFETEADGVPSYL 120
           G                                     ELDALEADMG ETEADGVPSYL
Sbjct: 166 GGKFFLCSLCCLSLGLVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYL 225

Query: 121 QPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG 133
           QPDKE +   ELNLP+AP+GH   P GR  AQAEDE GLPAVPRASLRG
Sbjct: 226 QPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEWGLPAVPRASLRG 272

[Close]
BLAST of MELO3C004965.2 vs. TAIR10
Match: AT2G19830.1 (SNF7 family protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 41/120 (34.17%), Postives = 55/120 (45.83%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + AL++    +K M K  +I D+D   DE+ +  +   +IQE L   +   +D DEDEL 
Sbjct: 101 VDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELE 160

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
            ELD LE   G E E       LQP      +G  N P      A  PA +     EDEL
Sbjct: 161 AELDELE---GAELE----EQLLQPVPIHVPQG--NKP------ARAPAQKQPTAEEDEL 204

[Close]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match: sp|Q9FMC5|VP602_ARATH (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-53
Identity = 111/132 (84.09%), Postives = 118/132 (89.39%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKE +   ELNLP+AP+GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEW 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match: sp|Q9LPN5|VP601_ARATH (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-52
Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match: sp|Q54JK4|CHMP5_DICDI (Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=chmp5 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           +SA+K   K++K  +K + I+D+D++QDEM DL+D +NEIQE+LGR+Y  PD +DE EL 
Sbjct: 105 VSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELE 164

Query: 61  GELDALEADMGFETEAD-GVPSYL 84
            EL      MG E E +  +PSYL
Sbjct: 165 AEL----MSMGEELELEASMPSYL 184

[Close]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match: sp|Q9VVI9|CHMP5_DROME (Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps60 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 5.2e-10
Identity = 44/129 (34.11%), Postives = 74/129 (57.36%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           ++A+K   K++K   K ++I  I+++QD+M D+ + ++E+QE LGR+Y +P ++D+D+L 
Sbjct: 106 VAAMKDGVKQMKTEYKKINIDQIEDIQDDMADMFEQADEVQEALGRTYGMP-EVDDDDLQ 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPI---GHAAVPAGRNNAQAE 120
            ELDAL    G E   D   SYL        +  +  P AP    G  ++  G++  +  
Sbjct: 166 AELDAL----GDEIALDDDTSYL--------DDVVKAPEAPSREPGADSIVPGKSTIET- 220

Query: 121 DELGLPAVP 127
           DE GLP +P
Sbjct: 226 DEFGLPKIP 220

[Close]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match: sp|Q8IL52|YSNF1_PLAF7 (Uncharacterized protein PF14_0397 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0397 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 3   ALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGE 62
           ALK+ +K LK  +K V+I  I+ LQD++ D ++ + EI   L  SY++P ++DE E+  E
Sbjct: 108 ALKNTSKVLKKNIKKVNINKIEKLQDDLFDYIEDTKEIGNILSSSYDIPLNLDEQEIDAE 167

Query: 63  LDALEADMGFE-TEADGVPSYLQPDKE 89
           L  +E  +  E  E D + SY++ DK+
Sbjct: 168 LALIEDSILDENVEQDNIASYIEDDKK 194

[Close]
BLAST of MELO3C004965.2 vs. TrEMBL
Match: tr|A0A1S3CIH4|A0A1S3CIH4_CUCME (charged multivesicular body protein 5-like OS=Cucumis melo OX=3656 GN=LOC103501350 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 9.3e-65
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 121 GLPAVPRASLRG 132

[Close]
BLAST of MELO3C004965.2 vs. TrEMBL
Match: tr|A0A1S3BFT5|A0A1S3BFT5_CUCME (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. TrEMBL
Match: tr|A0A0A0KWL4|A0A0A0KWL4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.1e-63
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. TrEMBL
Match: tr|M5XHS3|M5XHS3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G550400 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.5e-58
Identity = 118/132 (89.39%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDE++L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKES+ + EL+LP+APIGHAA PAGR+NAQAEDEL
Sbjct: 166 GELDALEADMGLETEADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965.2 vs. TrEMBL
Match: tr|A0A2P6SBQ8|A0A2P6SBQ8_ROSCH (Putative Snf7 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0331931 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57
Identity = 116/132 (87.88%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSY+VPDDIDE+EL+
Sbjct: 107 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYSVPDDIDEEELM 166

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETE+DGVPSYLQPD+ES+  GELNLP+APIGHAA PAGR+N QAEDEL
Sbjct: 167 GELDALEADMGMETESDGVPSYLQPDQESDLHGELNLPSAPIGHAAAPAGRSNGQAEDEL 226

Query: 121 GLPAVPRASLRG 133
           GLPAVPRA+LRG
Sbjct: 227 GLPAVPRATLRG 238

The following BLAST results are available for this feature:
BLAST of MELO3C004965.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463129.11.4e-64100.00PREDICTED: charged multivesicular body protein 5-like [Cucumis melo][more]
XP_008446740.12.0e-6398.48PREDICTED: charged multivesicular body protein 5 [Cucumis melo][more]
XP_004135046.17.7e-6397.73PREDICTED: charged multivesicular body protein 5 [Cucumis sativus] >KGN52171.1 h... [more]
XP_022957074.11.2e-6094.70vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985... [more]
XP_023541762.16.1e-6093.94vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pep... [more]
BLAST of MELO3C004965.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10640.16.1e-5481.06SNF7 family protein[more]
AT5G04850.22.7e-4965.68SNF7 family protein[more]
AT2G19830.12.6e-0434.17SNF7 family protein[more]
BLAST of MELO3C004965.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FMC5|VP602_ARATH1.3e-5384.09Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9LPN5|VP601_ARATH1.1e-5281.06Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q54JK4|CHMP5_DICDI6.5e-1348.81Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=ch... [more]
sp|Q9VVI9|CHMP5_DROME5.2e-1034.11Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps6... [more]
sp|Q8IL52|YSNF1_PLAF77.0e-0737.93Uncharacterized protein PF14_0397 OS=Plasmodium falciparum (isolate 3D7) OX=3632... [more]
BLAST of MELO3C004965.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIH4|A0A1S3CIH4_CUCME9.3e-65100.00charged multivesicular body protein 5-like OS=Cucumis melo OX=3656 GN=LOC1035013... [more]
tr|A0A1S3BFT5|A0A1S3BFT5_CUCME1.3e-6398.48charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE... [more]
tr|A0A0A0KWL4|A0A0A0KWL4_CUCSA5.1e-6397.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=3 SV=1[more]
tr|M5XHS3|M5XHS3_PRUPE6.5e-5889.39Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G550400 PE=3 SV=1[more]
tr|A0A2P6SBQ8|A0A2P6SBQ8_ROSCH4.2e-5787.88Putative Snf7 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0331931... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004965.2.1MELO3C004965.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..132
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..132
NoneNo IPR availablePANTHERPTHR22761:SF39VACUOLAR PROTEIN SORTING PROTEIN 60.2coord: 1..132
IPR005024Snf7 familyPFAMPF03357Snf7coord: 1..102
e-value: 1.2E-25
score: 90.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004965.2Watermelon (97103) v2medwmbB142
MELO3C004965.2Wax gourdmedwgoB176
MELO3C004965.2Cucumber (Gy14) v2cgybmedB009
MELO3C004965.2Cucurbita maxima (Rimu)cmamedB215
MELO3C004965.2Cucurbita maxima (Rimu)cmamedB451
MELO3C004965.2Cucurbita moschata (Rifu)cmomedB203
MELO3C004965.2Cucurbita moschata (Rifu)cmomedB439
MELO3C004965.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C004965.2Cucurbita pepo (Zucchini)cpemedB583
MELO3C004965.2Wild cucumber (PI 183967)cpimedB011
MELO3C004965.2Cucumber (Chinese Long) v2cumedB010
MELO3C004965.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004965.2Watermelon (Charleston Gray)medwcgB141
MELO3C004965.2Watermelon (97103) v1medwmB143
MELO3C004965.2Silver-seed gourdcarmedB0452
MELO3C004965.2Silver-seed gourdcarmedB1052
MELO3C004965.2Cucumber (Chinese Long) v3cucmedB009