MELO3C004965 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C004965
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCharged multivesicular body protein, putative
Locationchr12 : 5576319 .. 5577220 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATGTCAGTAACAATCAATTCTTTTTAGCATCCCTAGTTTTATTTTGGCATTTGTTGAGAGATTTGTGTTGCCTATAGAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGGTAAGATTACTGCATTTTAGCTCAGTGTCGATGAAATATATGGTACCTTAGTAATCTTACATTGTGCCTACGTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGTAATGATCGTTGAAAAACAGGATCCAATTTCTGAGTCAATAATCATGAACTTATTCGTTTTAGAAACGATTGTGAAATGAATATTACTTAGATATACAGGATGCATGCTAATGCCAACACCCTTTTTTTTCTCTTTCTTGAGAAAATTACTGTATAGTTCAACATGAATTATGCATATGCATCTATTAACATGAAGTTACACATCTGTCGTCTGTTCAAGAGAATGTCAGAATTCGTCGGTTCTAAATTACACAGTGTTATTGATATGGTTTAATTTTACCTTCACACCTTCGGCACTTTTACATGCATTGATTCTTTTTTTCCGCTTAATTTGATGGGCAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

mRNA sequence

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Coding sequence (CDS)

ATGTCGGCCTTGAAATCTGCCAATAAGGAGTTGAAAGGAATGATGAAAACAGTCAGTATACAAGACATAGATAACTTACAAGATGAGATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTACAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCTGACAAGGAATCTAATTTTGAAGGAGAGCTCAACTTGCCTGCCGCTCCGATAGGGCATGCAGCAGTTCCTGCTGGTAGAAACAATGCACAGGCCGAGGATGAATTAGGTTTACCCGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Protein sequence

MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG*
Homology
[Close]
BLAST of MELO3C004965 vs. Swiss-Prot
Match: CHMP5_DICDI (Charged multivesicular body protein 5 OS=Dictyostelium discoideum GN=chmp5 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-15
Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           +SA+K   K++K  +K + I+D+D++QDEM DL+D +NEIQE+LGR+Y  PD +DE EL 
Sbjct: 105 VSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELE 164

Query: 61  GELDALEADMGFETEAD-GVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDE 120
            EL      MG E E +  +PSYL                      +VP    +  + DE
Sbjct: 165 AEL----MSMGEELELEASMPSYLMT-------------------PSVPTTDPHQSSVDE 211

Query: 121 LGLPAVPRAS 130
            GLP    AS
Sbjct: 225 YGLPIGQEAS 211

[Close]
BLAST of MELO3C004965 vs. Swiss-Prot
Match: CHMP5_MOUSE (Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-14
Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L 
Sbjct: 106 VDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQA--ED 120
            ELDAL    G E  AD   SYL        +   + PA P G   VP    N      D
Sbjct: 166 AELDAL----GDELLADEDSSYL--------DEAASAPAIPEG---VPTDTKNKDGVLVD 217

Query: 121 ELGLPAVP 127
           E GLP +P
Sbjct: 226 EFGLPQIP 217

[Close]
BLAST of MELO3C004965 vs. Swiss-Prot
Match: CHMP5_RAT (Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-14
Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L 
Sbjct: 106 VDAMKLGVKEMKKAYKEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQA--ED 120
            ELDAL    G E  AD   SYL        +   + PA P G   VP    N      D
Sbjct: 166 AELDAL----GDELLADEDSSYL--------DEAASAPAIPEG---VPTDTKNKDGVLVD 217

Query: 121 ELGLPAVP 127
           E GLP +P
Sbjct: 226 EFGLPQIP 217

[Close]
BLAST of MELO3C004965 vs. Swiss-Prot
Match: CHMP5_DANRE (Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13
Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NE+QE L RSY  P +IDED+L 
Sbjct: 106 VEAMKIGAKEMKKAYKNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
            ELDAL    G E   D   SYL  D+ S      + PA P G         +    DE 
Sbjct: 166 AELDAL----GDELLLDDDNSYL--DEAS------SAPAIPEGAPGDRTTNRDGVLVDEF 218

Query: 121 GLPAVP 127
           GLP +P
Sbjct: 226 GLPQIP 218

[Close]
BLAST of MELO3C004965 vs. Swiss-Prot
Match: CHMP5_HUMAN (Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13
Identity = 53/128 (41.41%), Postives = 68/128 (53.12%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + A+K   KE+K   K V I  I++LQD++ D+M+ +NEIQE L RSY  P ++DED+L 
Sbjct: 106 VDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLE 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQA--ED 120
            ELDAL    G E  AD   SYL        +   + PA P G   VP    N      D
Sbjct: 166 AELDAL----GDELLADEDSSYL--------DEAASAPAIPEG---VPTDTKNKDGVLVD 217

Query: 121 ELGLPAVP 127
           E GLP +P
Sbjct: 226 EFGLPQIP 217

[Close]
BLAST of MELO3C004965 vs. TrEMBL
Match: A0A0A0KWL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-65
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]
BLAST of MELO3C004965 vs. TrEMBL
Match: M5XHS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-60
Identity = 118/132 (89.39%), Postives = 127/132 (96.21%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDE++L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKES+ + EL+LP+APIGHAA PAGR+NAQAEDEL
Sbjct: 166 GELDALEADMGLETEADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965 vs. TrEMBL
Match: A0A151T123_CAJCA (Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.3e-59
Identity = 117/132 (88.64%), Postives = 123/132 (93.18%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALK+ANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED+L+
Sbjct: 106 MSALKTANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKES+ E ELNLP+AP G  AVP GR+NAQ EDEL
Sbjct: 166 GELDALEADMGNETEADGVPSYLQPDKESDLEAELNLPSAPSGQTAVPPGRSNAQTEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965 vs. TrEMBL
Match: B9RXZ5_RICCO (Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_1305670 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.7e-58
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYN+PDDIDE+EL+
Sbjct: 106 MSALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNIPDDIDEEELM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG E E DGVPSYLQPDKE + + ELNLP+AP G AA PAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGLEIEGDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRAS+RG
Sbjct: 226 GLPAVPRASIRG 237

[Close]
BLAST of MELO3C004965 vs. TrEMBL
Match: A0A067K5L9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18215 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.5e-58
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMK V IQDIDNLQDEMMDLMD+SNEIQETLGRSYNVPDDIDE+EL+
Sbjct: 1   MSALKSANKELKGMMKIVKIQDIDNLQDEMMDLMDMSNEIQETLGRSYNVPDDIDEEELM 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKE + + ELNLP+AP G+AA PAGRNNA AEDEL
Sbjct: 61  GELDALEADMGMETEADGVPSYLQPDKEPDLDAELNLPSAPTGNAAAPAGRNNALAEDEL 120

Query: 121 GLPAVPRASLRG 133
           GLPAVPRAS+RG
Sbjct: 121 GLPAVPRASIRG 132

[Close]
BLAST of MELO3C004965 vs. TAIR10
Match: AT3G10640.1 (AT3G10640.1 SNF7 family protein)

HSP 1 Score: 214.9 bits (546), Expect = 3.0e-56
Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADG+PSYLQPD E++++ ELNLPAAP GH   P GR  AQAEDE 
Sbjct: 166 GELDALEADMGNETEADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEF 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 235

[Close]
BLAST of MELO3C004965 vs. TAIR10
Match: AT5G04850.2 (AT5G04850.2 SNF7 family protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-51
Identity = 111/169 (65.68%), Postives = 116/169 (68.64%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LL
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLL 165

Query: 61  G-------------------------------------ELDALEADMGFETEADGVPSYL 120
           G                                     ELDALEADMG ETEADGVPSYL
Sbjct: 166 GGKFFLCSLCCLSLGLVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYL 225

Query: 121 QPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG 133
           QPDKE +   ELNLP+AP+GH   P GR  AQAEDE GLPAVPRASLRG
Sbjct: 226 QPDKEPDLNDELNLPSAPMGHTGAPPGR--AQAEDEWGLPAVPRASLRG 272

[Close]
BLAST of MELO3C004965 vs. TAIR10
Match: AT4G29160.1 (AT4G29160.1 SNF7 family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 39/115 (33.91%), Postives = 52/115 (45.22%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + AL+S    +K M K  +I D+D   DE+ +  +   +IQE L        D DEDEL 
Sbjct: 100 VDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELA 159

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQ 116
            ELD LE++   E E+      LQP             A P+    VPAGR  A+
Sbjct: 160 AELDELESE---ELES----QLLQP----------ATTAPPLPSVPVPAGRQPAR 197

[Close]
BLAST of MELO3C004965 vs. TAIR10
Match: AT2G19830.1 (AT2G19830.1 SNF7 family protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06
Identity = 41/120 (34.17%), Postives = 54/120 (45.00%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           + AL++    +K M K  +I D+D   DE+ +  +   +IQE L   +   +D DEDEL 
Sbjct: 101 VDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELE 160

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
            ELD LE   G E E       LQP      +G  N P      A  PA +     EDEL
Sbjct: 161 AELDELE---GAELE----EQLLQPVPIHVPQG--NKP------ARAPAQKQPTAEEDEL 204

[Close]
BLAST of MELO3C004965 vs. NCBI nr
Match: gi|659072035|ref|XP_008463129.1| (PREDICTED: charged multivesicular body protein 5-like [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 4.6e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 121 GLPAVPRASLRG 132

[Close]
BLAST of MELO3C004965 vs. NCBI nr
Match: gi|659091801|ref|XP_008446740.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 6.6e-66
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965 vs. NCBI nr
Match: gi|449434524|ref|XP_004135046.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-65
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           MSALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL
Sbjct: 106 MSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMGFETEADGVPSYLQPDKES+FEGELNLPAAPIGHAAVPAGRNNAQAEDEL
Sbjct: 166 GELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVP ASLRG
Sbjct: 226 GLPAVPHASLRG 237

[Close]
BLAST of MELO3C004965 vs. NCBI nr
Match: gi|596210163|ref|XP_007223847.1| (hypothetical protein PRUPE_ppa010749mg [Prunus persica])

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-60
Identity = 118/132 (89.39%), Postives = 127/132 (96.21%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDE++L+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ETEADGVPSYLQPDKES+ + EL+LP+APIGHAA PAGR+NAQAEDEL
Sbjct: 166 GELDALEADMGLETEADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRASLRG
Sbjct: 226 GLPAVPRASLRG 237

[Close]
BLAST of MELO3C004965 vs. NCBI nr
Match: gi|470142773|ref|XP_004307072.1| (PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-59
Identity = 116/132 (87.88%), Postives = 127/132 (96.21%), Query Frame = 1 

Query: 1   MSALKSANKELKGMMKTVSIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELL 60
           M+ALKSANKELKGMMKTV IQDIDNLQDEMMDLMDVSNEIQETLGRSY+VPDDIDE+EL+
Sbjct: 106 MTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYSVPDDIDEEELM 165

Query: 61  GELDALEADMGFETEADGVPSYLQPDKESNFEGELNLPAAPIGHAAVPAGRNNAQAEDEL 120
           GELDALEADMG ET++DGVPSYLQPD+ES+ +GELNLP+APIGHAAVPAGR N QAEDEL
Sbjct: 166 GELDALEADMGMETKSDGVPSYLQPDRESDIDGELNLPSAPIGHAAVPAGRTNGQAEDEL 225

Query: 121 GLPAVPRASLRG 133
           GLPAVPRA+LRG
Sbjct: 226 GLPAVPRATLRG 237

The following BLAST results are available for this feature:
BLAST of MELO3C004965 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHMP5_DICDI4.1e-1538.46Charged multivesicular body protein 5 OS=Dictyostelium discoideum GN=chmp5 PE=3 ... [more]
CHMP5_MOUSE7.6e-1442.19Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1[more]
CHMP5_RAT7.6e-1442.19Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1[more]
CHMP5_DANRE3.8e-1340.48Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1[more]
CHMP5_HUMAN3.8e-1341.41Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1[more]
BLAST of MELO3C004965 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWL4_CUCSA1.7e-6597.73Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1[more]
M5XHS3_PRUPE2.2e-6089.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1[more]
A0A151T123_CAJCA9.3e-5988.64Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1[more]
B9RXZ5_RICCO2.7e-5887.12Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_130567... [more]
A0A067K5L9_JATCU3.5e-5887.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18215 PE=3 SV=1[more]
BLAST of MELO3C004965 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10640.13.0e-5681.06 SNF7 family protein[more]
AT5G04850.21.3e-5165.68 SNF7 family protein[more]
AT4G29160.11.8e-0833.91 SNF7 family protein[more]
AT2G19830.12.1e-0634.17 SNF7 family protein[more]
BLAST of MELO3C004965 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072035|ref|XP_008463129.1|4.6e-67100.00PREDICTED: charged multivesicular body protein 5-like [Cucumis melo][more]
gi|659091801|ref|XP_008446740.1|6.6e-6698.48PREDICTED: charged multivesicular body protein 5 [Cucumis melo][more]
gi|449434524|ref|XP_004135046.1|2.5e-6597.73PREDICTED: charged multivesicular body protein 5 [Cucumis sativus][more]
gi|596210163|ref|XP_007223847.1|3.2e-6089.39hypothetical protein PRUPE_ppa010749mg [Prunus persica][more]
gi|470142773|ref|XP_004307072.1|1.2e-5987.88PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. ves... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004965T1MELO3C004965T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 1..102
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 23..43
scor
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..131
score: 2.4
NoneNo IPR availablePANTHERPTHR22761:SF17SUBFAMILY NOT NAMEDcoord: 1..131
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004965Cucumber (Chinese Long) v3cucmeB010
MELO3C004965Watermelon (97103) v2mewmbB153
MELO3C004965Wax gourdmewgoB174
MELO3C004965Cucurbita maxima (Rimu)cmameB194
MELO3C004965Cucurbita maxima (Rimu)cmameB391
MELO3C004965Cucurbita moschata (Rifu)cmomeB181
MELO3C004965Cucurbita moschata (Rifu)cmomeB382
MELO3C004965Wild cucumber (PI 183967)cpimeB011
MELO3C004965Cucumber (Chinese Long) v2cumeB015
MELO3C004965Watermelon (Charleston Gray)mewcgB149
MELO3C004965Watermelon (97103) v1mewmB146
MELO3C004965Cucurbita pepo (Zucchini)cpemeB480
MELO3C004965Cucurbita pepo (Zucchini)cpemeB490
MELO3C004965Bottle gourd (USVL1VR-Ls)lsimeB244
MELO3C004965Cucumber (Gy14) v2cgybmeB010
MELO3C004965Silver-seed gourdcarmeB0449
MELO3C004965Silver-seed gourdcarmeB1038