MELO3C004877.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004877.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionBURP domain-containing protein 5-like
Locationchr12 : 8250084 .. 8250260 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAAAGGTATTGTGCAACGTCATTAGAGTCCATGGTGATGTTGCAATCATGAAGATGGGGAAGGAAGTCACACCATTGTCAGCTATAGTGGTGGATGGAATGAACTCAAAGTATTCAAAAGTTTCGACGGTGGTGGAGAAGTCAATGGTAAAAAACCTTCTTTGCCACTAG

mRNA sequence

ATGGGAAGAAAGGTATTGTGCAACGTCATTAGAGTCCATGGTGATGTTGCAATCATGAAGATGGGGAAGGAAGTCACACCATTGTCAGCTATAGTGGTGGATGGAATGAACTCAAAGTATTCAAAAGTTTCGACGGTGGTGGAGAAGTCAATGGTAAAAAACCTTCTTTGCCACTAG

Coding sequence (CDS)

ATGGGAAGAAAGGTATTGTGCAACGTCATTAGAGTCCATGGTGATGTTGCAATCATGAAGATGGGGAAGGAAGTCACACCATTGTCAGCTATAGTGGTGGATGGAATGAACTCAAAGTATTCAAAAGTTTCGACGGTGGTGGAGAAGTCAATGGTAAAAAACCTTCTTTGCCACTAG

Protein sequence

MGRKVLCNVIRVHGDVAIMKMGKEVTPLSAIVVDGMNSKYSKVSTVVEKSMVKNLLCH
Homology
[Close]
BLAST of MELO3C004877.2 vs. NCBI nr
Match: XP_008451378.1 (PREDICTED: BURP domain-containing protein 5-like [Cucumis melo])

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-07
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 15  DVAIMKMGKEVTPLSAIVVDGMNSKYSKVSTVVEKSMVKNLLCH 59
           DV IMKMGKEV  +SA V DGMN  YS+VSTVVEKS V NLLCH
Sbjct: 148 DVVIMKMGKEVKVMSATVEDGMNPTYSQVSTVVEKSKVNNLLCH 191

[Close]
BLAST of MELO3C004877.2 vs. TrEMBL
Match: tr|A0A1S3BQR7|A0A1S3BQR7_CUCME (BURP domain-containing protein 5-like OS=Cucumis melo OX=3656 GN=LOC103492683 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-07
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 15  DVAIMKMGKEVTPLSAIVVDGMNSKYSKVSTVVEKSMVKNLLCH 59
           DV IMKMGKEV  +SA V DGMN  YS+VSTVVEKS V NLLCH
Sbjct: 148 DVVIMKMGKEVKVMSATVEDGMNPTYSQVSTVVEKSKVNNLLCH 191

The following BLAST results are available for this feature:
BLAST of MELO3C004877.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008451378.12.0e-0775.00PREDICTED: BURP domain-containing protein 5-like [Cucumis melo][more]
BLAST of MELO3C004877.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C004877.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C004877.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQR7|A0A1S3BQR7_CUCME1.3e-0775.00BURP domain-containing protein 5-like OS=Cucumis melo OX=3656 GN=LOC103492683 PE... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004877.2.1MELO3C004877.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004877.2Cucumber (Gy14) v2cgybmedB009
MELO3C004877.2Cucumber (Gy14) v1cgymedB361
MELO3C004877.2Cucurbita maxima (Rimu)cmamedB161
MELO3C004877.2Cucurbita maxima (Rimu)cmamedB215
MELO3C004877.2Cucurbita moschata (Rifu)cmomedB203
MELO3C004877.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C004877.2Cucurbita pepo (Zucchini)cpemedB880
MELO3C004877.2Wild cucumber (PI 183967)cpimedB011
MELO3C004877.2Cucumber (Chinese Long) v2cumedB010
MELO3C004877.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004877.2Watermelon (Charleston Gray)medwcgB127
MELO3C004877.2Watermelon (97103) v1medwmB165
MELO3C004877.2Silver-seed gourdcarmedB0174
MELO3C004877.2Cucumber (Chinese Long) v3cucmedB009
MELO3C004877.2Watermelon (97103) v2medwmbB127
MELO3C004877.2Wax gourdmedwgoB176