MELO3C004868.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004868.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionhistone H2B
Locationchr12 : 8455283 .. 8455773 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGATATTGGAATCTCCAGCAAAGCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAGATTCACAGATTAGGGTTTTCTTGTGTAAAAAGCGGCCTGATTGTTCTGAATCGTTGACTTAGCTTCCTTTTTGTTGCATATTTTGGAATCAATTGAATGAAAAGTCGGTTTTTGTTAAGCGATTTCTCTATTTTCCTTCTTAATTTTATATTGTACTCTGTCCAATGGAACTCTGAAGATTGCTTCCTCTTTTGTCTATGGCTTGATGAGTTCATGTAGTCGCGCATTTTTAGCAATTAAAATCGAAATTTTAAATTCTTTTC

mRNA sequence

CCCGATATTGGAATCTCCAGCAAAGCCATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAGATTCACAGATTAGGGTTTTCTTGTGTAAAAAGCGGCCTGATTGTTCTGAATCGTTGACTTAGCTTCCTTTTTGTTGCATATTTTGGAATCAATTGAATGAAAAGTCGGTTTTTGTTAAGCGATTTCTCTATTTTCCTTCTTAATTTTATATTGTACTCTGTCCAATGGAACTCTGAAGATTGCTTCCTCTTTTGTCTATGGCTTGATGAGTTCATGTAGTCGCGCATTTTTAGCAATTAAAATCGAAATTTTAAATTCTTTTC

Coding sequence (CDS)

ATGGGTATTATGAACAGTTTTATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAAAAGCCGACCATAACCTCTCGGGAGATCCAAACGGCTGTGCGCCTTGTTCTTCCTGGTGAGTTGGCTAAACACGCCGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTTACTAGCTCTTAG

Protein sequence

MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Homology
[Close]
BLAST of MELO3C004868.2 vs. NCBI nr
Match: AAM66958.1 (histone H2B [Arabidopsis thaliana] >OAP15181.1 HTB1 [Arabidopsis thaliana])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]
BLAST of MELO3C004868.2 vs. NCBI nr
Match: XP_020868538.1 (histone H2B.1 [Arabidopsis lyrata subsp. lyrata] >EFH65923.1 hypothetical protein ARALYDRAFT_470811 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 84  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 143

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 144 TKFTSS 149

[Close]
BLAST of MELO3C004868.2 vs. NCBI nr
Match: XP_004139453.1 (PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 77  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 136

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 137 TKFTSS 142

[Close]
BLAST of MELO3C004868.2 vs. NCBI nr
Match: XP_004143093.1 (PREDICTED: histone H2B [Cucumis sativus] >KGN47176.1 hypothetical protein Csa_6G193620 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 87  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 146

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 147 TKFTSS 152

[Close]
BLAST of MELO3C004868.2 vs. NCBI nr
Match: XP_011654070.1 (PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2B.7 [Cucumis sativus] >KGN64852.1 Histone H2B [Cucumis sativus] >KGN64854.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 77  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 136

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 137 TKFTSS 142

[Close]
BLAST of MELO3C004868.2 vs. TAIR10
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 5.2e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]
BLAST of MELO3C004868.2 vs. TAIR10
Match: AT2G37470.1 (Histone superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 74  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 133

Query: 61  TKFTS 66
           TKFTS
Sbjct: 134 TKFTS 138

[Close]
BLAST of MELO3C004868.2 vs. TAIR10
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 145

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 146 TKFTSS 151

[Close]
BLAST of MELO3C004868.2 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 67  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 126

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 127 TKFTSS 132

[Close]
BLAST of MELO3C004868.2 vs. TAIR10
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-29
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 85  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 144

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 145 TKFTSS 150

[Close]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match: sp|Q9LQQ4|H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 9.5e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 85  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 144

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 145 TKFTSS 150

[Close]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match: sp|Q1S9I9|H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match: sp|Q9SI96|H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 86  MGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 145

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 146 TKFTSS 151

[Close]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match: sp|Q1SU99|H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 73  MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 132

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 133 TKFTSS 138

[Close]
BLAST of MELO3C004868.2 vs. TrEMBL
Match: tr|A0A2J6K606|A0A2J6K606_LACSA (Histone H2B OS=Lactuca sativa OX=4236 GN=LSAT_1X64820 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 81  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 140

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 141 TKFTSS 146

[Close]
BLAST of MELO3C004868.2 vs. TrEMBL
Match: tr|M5WDD7|M5WDD7_PRUPE (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 83  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 142

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 143 TKFTSS 148

[Close]
BLAST of MELO3C004868.2 vs. TrEMBL
Match: tr|M5W0M7|M5W0M7_PRUPE (Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 76  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 135

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 136 TKFTSS 141

[Close]
BLAST of MELO3C004868.2 vs. TrEMBL
Match: tr|A0A0A0LV55|A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 77  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 136

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 137 TKFTSS 142

[Close]
BLAST of MELO3C004868.2 vs. TrEMBL
Match: tr|A0A1J3FK61|A0A1J3FK61_NOCCA (Histone H2B OS=Noccaea caerulescens OX=107243 GN=GA_TR19876_c1_g1_i1_g.65848 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1   MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 60
           MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV
Sbjct: 73  MGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAV 132

Query: 61  TKFTSS 67
           TKFTSS
Sbjct: 133 TKFTSS 138

The following BLAST results are available for this feature:
BLAST of MELO3C004868.2 vs. NCBI nr
Match NameE-valueIdentityDescription
AAM66958.12.9e-26100.00histone H2B [Arabidopsis thaliana] >OAP15181.1 HTB1 [Arabidopsis thaliana][more]
XP_020868538.12.9e-26100.00histone H2B.1 [Arabidopsis lyrata subsp. lyrata] >EFH65923.1 hypothetical protei... [more]
XP_004139453.12.9e-26100.00PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis... [more]
XP_004143093.12.9e-26100.00PREDICTED: histone H2B [Cucumis sativus] >KGN47176.1 hypothetical protein Csa_6G... [more]
XP_011654070.12.9e-26100.00PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2... [more]
BLAST of MELO3C004868.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07790.15.2e-30100.00Histone superfamily protein[more]
AT2G37470.11.2e-29100.00Histone superfamily protein[more]
AT2G28720.11.2e-2998.48Histone superfamily protein[more]
AT5G02570.11.2e-2998.48Histone superfamily protein[more]
AT5G59910.11.2e-2998.48Histone superfamily protein[more]
BLAST of MELO3C004868.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LQQ4|H2B1_ARATH9.5e-29100.00Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3[more]
sp|P40283|H2B11_ARATH2.1e-2898.48Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
sp|Q1S9I9|H2B1_MEDTR2.1e-2898.48Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
sp|Q9SI96|H2B3_ARATH2.1e-2898.48Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3[more]
sp|Q1SU99|H2B3_MEDTR2.1e-2898.48Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
BLAST of MELO3C004868.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2J6K606|A0A2J6K606_LACSA1.9e-26100.00Histone H2B OS=Lactuca sativa OX=4236 GN=LSAT_1X64820 PE=3 SV=1[more]
tr|M5WDD7|M5WDD7_PRUPE1.9e-26100.00Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1[more]
tr|M5W0M7|M5W0M7_PRUPE1.9e-26100.00Histone H2B OS=Prunus persica OX=3760 GN=PRUPE_6G082700 PE=3 SV=1[more]
tr|A0A0A0LV55|A0A0A0LV55_CUCSA1.9e-26100.00Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1[more]
tr|A0A1J3FK61|A0A1J3FK61_NOCCA1.9e-26100.00Histone H2B OS=Noccaea caerulescens OX=107243 GN=GA_TR19876_c1_g1_i1_g.65848 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR000558Histone_H2B
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000786 nucleosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004868.2.1MELO3C004868.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 37..50
score: 92.45
coord: 20..37
score: 76.51
coord: 50..63
score: 92.65
IPR000558Histone H2BSMARTSM00427h2b3coord: 1..65
e-value: 5.1E-35
score: 132.3
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..66
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 34..56
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 1..66
e-value: 2.4E-37
score: 129.7
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 1..66
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..42
e-value: 6.4E-10
score: 39.4
NoneNo IPR availablePANTHERPTHR23428:SF106HISTONE H2B.3-RELATEDcoord: 1..66

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C004868.2Cla97C01G012800Watermelon (97103) v2medwmbB127
MELO3C004868.2Bhi08G000126Wax gourdmedwgoB176
MELO3C004868.2Carg23703Silver-seed gourdcarmedB0174
MELO3C004868.2CsaV3_1G014110Cucumber (Chinese Long) v3cucmedB009
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004868.2Cucumber (Gy14) v2cgybmedB009
MELO3C004868.2Cucumber (Gy14) v1cgymedB361
MELO3C004868.2Cucurbita maxima (Rimu)cmamedB161
MELO3C004868.2Cucurbita maxima (Rimu)cmamedB215
MELO3C004868.2Cucurbita moschata (Rifu)cmomedB203
MELO3C004868.2Cucurbita pepo (Zucchini)cpemedB563
MELO3C004868.2Cucurbita pepo (Zucchini)cpemedB880
MELO3C004868.2Wild cucumber (PI 183967)cpimedB011
MELO3C004868.2Cucumber (Chinese Long) v2cumedB010
MELO3C004868.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004868.2Watermelon (Charleston Gray)medwcgB127
MELO3C004868.2Watermelon (97103) v1medwmB165