MELO3C004856.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGCACTACTGCTACTACTACACATGGGATAACAAAACGCACAAGGCTCATTAGACTTGTAGGAAGAAGCTTGTTGGGAGTAATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCAAAGTCGTAGTCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCATTCACTGTCAAAAGCTACAACCCGAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACGCTCACGCCCAGAAACCAAACCGTCTTGTGGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAATCCAGAACTACAATTCTCAGCTGAAGTCAGGTACACTCATTTAGAGATAATTTTAAAGTTAGACCCAAATTTTTGGACAAAATGGAATATGCTCAACTTTTAA ATGAGAAGCACTACTGCTACTACTACACATGGGATAACAAAACGCACAAGGCTCATTAGACTTGTAGGAAGAAGCTTGTTGGGAGTAATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCAAAGTCGTAGTCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCATTCACTGTCAAAAGCTACAACCCGAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACGCTCACGCCCAGAAACCAAACCGTCTTGTGGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAATCCAGAACTACAATTCTCAGCTGAAGTCAGGTACACTCATTTAGAGATAATTTTAAAGTTAGACCCAAATTTTTGGACAAAATGGAATATGCTCAACTTTTAA ATGAGAAGCACTACTGCTACTACTACACATGGGATAACAAAACGCACAAGGCTCATTAGACTTGTAGGAAGAAGCTTGTTGGGAGTAATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCAAAGTCGTAGTCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCATTCACTGTCAAAAGCTACAACCCGAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACGCTCACGCCCAGAAACCAAACCGTCTTGTGGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAATCCAGAACTACAATTCTCAGCTGAAGTCAGGTACACTCATTTAGAGATAATTTTAAAGTTAGACCCAAATTTTTGGACAAAATGGAATATGCTCAACTTTTAA MRSTTATTTHGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPFGYTEEINPELQFSAEVRYTHLEIILKLDPNFWTKWNMLNF
BLAST of MELO3C004856.2 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo]) HSP 1 Score: 287.0 bits (733), Expect = 4.4e-74 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of MELO3C004856.2 vs. NCBI nr
Match: XP_011654126.1 (PREDICTED: protein YLS9-like isoform X1 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70 Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of MELO3C004856.2 vs. NCBI nr
Match: XP_011654134.1 (PREDICTED: protein YLS9-like isoform X2 [Cucumis sativus] >KGN64866.1 hypothetical protein Csa_1G132760 [Cucumis sativus]) HSP 1 Score: 274.2 bits (700), Expect = 2.9e-70 Identity = 142/151 (94.04%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of MELO3C004856.2 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46 Identity = 97/139 (69.78%), Postives = 114/139 (82.01%), Query Frame = 0
BLAST of MELO3C004856.2 vs. NCBI nr
Match: XP_011648454.1 (PREDICTED: uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_1G132770 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46 Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04 Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TrEMBL
Match: tr|A0A1S3CGS4|A0A1S3CGS4_CUCME (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 2.9e-74 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TrEMBL
Match: tr|A0A0A0LY09|A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.9e-70 Identity = 142/151 (94.04%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TrEMBL
Match: tr|A0A1S3CGR5|A0A1S3CGR5_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46 Identity = 97/139 (69.78%), Postives = 114/139 (82.01%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TrEMBL
Match: tr|A0A0A0LVK9|A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46 Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of MELO3C004856.2 vs. TrEMBL
Match: tr|A0A1S3CGQ5|A0A1S3CGQ5_CUCME (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 6.1e-40 Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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