MELO3C004853 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C004853
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S3, chloroplastic
Locationchr12 : 8773551 .. 8775374 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAGGCATTTTGGCCGAACCATGTATATCTTCTGCTTTTCTTCTTCTTCTTCTTCTTTAAACTACAATATGTTTTCTTCTCCTTTATTCAAAATAAGTTTCATTAAAACCTAGGGTTTGCAAAGAGGAAGAGGAGAAATACAAGGAGAGAAAGAAAAGGTAACTCTACTGTGTTTTTCCTTTCCTTTCACGTTTTCTTCTTTGTGCAAATTGATAAATAATAAAAGAAGGAGATTCTGCCATGTGTACGGTCAAAAAACAAATGCTTGTTGTAACGACCCAACTTTCCGGACTAAGCTGAGGTCACTACCAAATACCAAAACTCGACCATTCAACATAAAATTTAAAACGGACCGGNNNNNNNNNNNNNNNNNNNNAAAATAAATACGCTTAACACAAAGGGAGAAAAAGAAATAATAGTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTGTTTATATAACGGATCGTATGGTAGGTCATAAATTGGGAGAATTCGCACCCACTCGCAATTTCCGGGGGCATGTGAAAAATGATAATAGACCTCGTCGTTAATAATTAATATTATGAAAAAAAAAAAAAAAAGTGAATAGTGAATATAGATACCTATCGTTCATTACTAAGAGGTAAACCTTATGATAAAGAAGAGAAAAAAAAAAAAAAAATCAATCTGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAAAAAAATTAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAAAAAAAAATACATCTGTGAATAAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAAAAAAATAAAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGGTTTACAAGAAGATCAAAAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAAAAAAAAACATGAGAATATTTTCTGGTGTTGAAGGAATTGCACGTATCGAGATTCAAAAAAAAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGG

mRNA sequence

ATGGATGTAGGCATTTTGGCCGAACCATATACCTATCGTTCATTACTAAGAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAAAAAAATAAAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGG

Coding sequence (CDS)

ATGGATGTAGGCATTTTGGCCGAACCATATACCTATCGTTCATTACTAAGAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGAAGAATTTAAAAGATACCAATACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAAAAAAATAAAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTGTGGTTTGCACACCCCAAAAAATATTCTGAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTTAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCAGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGACGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGG

Protein sequence

MDVGILAEPYTYRSLLRGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNERDLVISKAEVNQEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKKKNKNPLGFRLGATQGHHSLWFAHPKKYSEVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYG
Homology
[Close]
BLAST of MELO3C004853 vs. Swiss-Prot
Match: RR3_CUCSA (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus GN=rps3 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-67
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKL+I+ GSRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205


HSP 2 Score: 252.3 bits (643), Expect = 6.5e-66
Identity = 136/200 (68.00%), Postives = 142/200 (71.00%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSEVI-------------------IFMGFPKLLIEGG 192
           NPLGFRLGATQGHHSLWFAHPKKYSE +                   IF G   +     
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIQNYVQKNMRIFSGVEGIARIEI 65

Query: 193 SRKIEELQMNV-----------------------QKELNSGNRKLNIAITRIGNPYGHPN 252
            ++I+ +Q+ +                       QKE NSGNRKLNIAITRIGNPYGHPN
Sbjct: 66  QKRIDLIQVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPN 125

Query: 253 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 291
           ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP
Sbjct: 126 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 185

[Close]
BLAST of MELO3C004853 vs. Swiss-Prot
Match: RR3_GOSHI (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum GN=rps3 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.3e-61
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI AK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAK 192

Query: 278 IDYCCYPVRTIYG 291
           I+YC Y VRTIYG
Sbjct: 193 IEYCSYRVRTIYG 205


HSP 2 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 23/26 (88.46%), Postives = 21/26 (80.77%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLG TQ HHSLWFA PKKYSE
Sbjct: 6   NPLGFRLGTTQSHHSLWFAQPKKYSE 31

[Close]
BLAST of MELO3C004853 vs. Swiss-Prot
Match: RR3_GOSBA (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense GN=rps3 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.3e-61
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI AK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAK 192

Query: 278 IDYCCYPVRTIYG 291
           I+YC Y VRTIYG
Sbjct: 193 IEYCSYRVRTIYG 205


HSP 2 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 23/26 (88.46%), Postives = 21/26 (80.77%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLG TQ HHSLWFA PKKYSE
Sbjct: 6   NPLGFRLGTTQSHHSLWFAQPKKYSE 31

[Close]
BLAST of MELO3C004853 vs. Swiss-Prot
Match: RR3_EUCGG (30S ribosomal protein S3, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps3 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.3e-61
Identity = 117/133 (87.97%), Postives = 124/133 (93.23%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VII+MGFPKLL+EG +R+IEELQMNVQKELN  NRKLNIAITRI NPYGHPNILAEFIA
Sbjct: 73  QVIIYMGFPKLLLEGKTRRIEELQMNVQKELNCVNRKLNIAITRITNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKA+KKAIELTEQA TKGIQVQIAGR+DGKEIARVEW+REGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRLDGKEIARVEWMREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYC Y VRT+YG
Sbjct: 193 IDYCSYGVRTVYG 205


HSP 2 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 20/26 (76.92%), Postives = 20/26 (76.92%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLG TQGHHS+WFA  K YS+
Sbjct: 6   NPLGFRLGTTQGHHSIWFAQAKNYSD 31

[Close]
BLAST of MELO3C004853 vs. Swiss-Prot
Match: RR3_MORIN (30S ribosomal protein S3, chloroplastic OS=Morus indica GN=rps3 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.2e-61
Identity = 119/133 (89.47%), Postives = 124/133 (93.23%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VII+MGFPKLLIE   +KIEELQMN+QKELNS NRKLN+AITRI NPYGHPNILAEFIA
Sbjct: 73  QVIIYMGFPKLLIE--HQKIEELQMNIQKELNSVNRKLNMAITRIANPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI+AK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIKAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYC Y VRTIYG
Sbjct: 193 IDYCSYTVRTIYG 203


HSP 2 Score: 57.4 bits (137), Expect = 3.0e-07
Identity = 24/26 (92.31%), Postives = 22/26 (84.62%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLGATQGHHSLWFA PK YSE
Sbjct: 6   NPLGFRLGATQGHHSLWFAQPKNYSE 31

[Close]
BLAST of MELO3C004853 vs. TrEMBL
Match: S8EET6_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00220 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.3e-76
Identity = 178/328 (54.27%), Postives = 206/328 (62.80%), Query Frame = 1 

Query: 18  GQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNE 77
           GQHI +S  KARR+IDQIRGRSYEET++ILELM YR CY ILKLVYSAA+NA   +G ++
Sbjct: 13  GQHISISDDKARRIIDQIRGRSYEETLIILELMSYRACYPILKLVYSAASNARCILGSDK 72

Query: 78  RDLVISKAEVNQ---------------EEFKRYQYTINKPGGLITKEKYTDMTCYEMYTN 137
            +LVISKAEVN+                  K+    I      I+ ++Y DM     Y  
Sbjct: 73  ANLVISKAEVNKGTTRKKFQTRARGRSSAIKKATCHITIVVKDISLDEYEDM-----YPW 132

Query: 138 GGLWDKKKN-------------------------------------KNPLGFRLGATQGH 197
           GG   +K N                                     KN +  ++  T G+
Sbjct: 133 GGSMGQKINPLGFRLGTTQSHYSIWFSQPKKYSKDLQEDQKIRDFLKNYIQKKIRITSGN 192

Query: 198 HSLWFAHPKK---YSEVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRI 257
             +     +K     +VIIFMGFPKLLIE   R IEELQMN+QKE    NRKLNIAITRI
Sbjct: 193 EGIARIEIQKRIDLIQVIIFMGFPKLLIENRPRGIEELQMNIQKEFPYVNRKLNIAITRI 252

Query: 258 GNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVE 291
             PYG+P ILAEF+AGQLKNRVSFRKA+KKAIELTEQA TKGIQVQI+GRIDGKEIARVE
Sbjct: 253 PKPYGNPTILAEFLAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQISGRIDGKEIARVE 312

[Close]
BLAST of MELO3C004853 vs. TrEMBL
Match: G3ETT6_CUCME (30S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. melo GN=rps3 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. TrEMBL
Match: G3ETT6_CUCME (30S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. melo GN=rps3 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54
Identity = 122/200 (61.00%), Postives = 135/200 (67.50%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSEVI-------------------IFMGFPKLLIEGG 192
           NPLGFRLGATQGHHSLWFAHPKKYSE +                   IF G   +     
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEI 65

Query: 193 SRKIEELQMNV-----QKELNSGNRKLNIAITRI------------------GNPYGHPN 252
            ++I+ +Q+ +     +  +  G+RK+      +                  GNPYGHPN
Sbjct: 66  QKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPN 125

Query: 253 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 291
           ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP
Sbjct: 126 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 185


HSP 2 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. TrEMBL
Match: X2EYC6_LAGSI (30S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria GN=rps3 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-06
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLGATQGHHSLWFAHP+KYSE
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPQKYSE 31


HSP 2 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. TrEMBL
Match: X2F0P5_LAGSI (30S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria GN=rps3 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.7e-54
Identity = 121/200 (60.50%), Postives = 135/200 (67.50%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSEVI-------------------IFMGFPKLLIEGG 192
           NPLGFRLGATQGHHSLWFAHP+KYSE +                   IF G   +     
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEI 65

Query: 193 SRKIEELQMNV-----QKELNSGNRKLNIAITRI------------------GNPYGHPN 252
            ++I+ +Q+ +     +  +  G+RK+      +                  GNPYGHPN
Sbjct: 66  QKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPN 125

Query: 253 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 291
           ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP
Sbjct: 126 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 185


HSP 2 Score: 265.4 bits (677), Expect = 8.2e-68
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. TAIR10
Match: ATCG00800.1 (ATCG00800.1 structural constituent of ribosome)

HSP 1 Score: 232.3 bits (591), Expect = 3.9e-61
Identity = 117/133 (87.97%), Postives = 120/133 (90.23%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           ++II+MGFPKLLIE   R++EELQMNVQKELN  NRKLNIAITRI NPYG PNILAEFIA
Sbjct: 73  QIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNPYGDPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQA TKGIQVQIAGRIDGKEIARVEWIREGRVPLQTI AK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIEAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYC Y VRTIYG
Sbjct: 193 IDYCSYTVRTIYG 205


HSP 2 Score: 55.5 bits (132), Expect = 6.5e-08
Identity = 23/26 (88.46%), Postives = 21/26 (80.77%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLG TQ HHSLWFA PKKYSE
Sbjct: 6   NPLGFRLGTTQSHHSLWFAQPKKYSE 31

[Close]
BLAST of MELO3C004853 vs. TAIR10
Match: ATCG00810.1 (ATCG00810.1 ribosomal protein L22)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 77/147 (52.38%), Postives = 85/147 (57.82%), Query Frame = 1 

Query: 18  GQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNE 77
           GQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLVYSAAANASHN GF E
Sbjct: 17  GQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASHNKGFKE 76

Query: 78  RDLVISKAEVNQEE---------------FKR--------------------YQYTINKP 130
            +LVISKAEVNQ                  KR                    Y   + KP
Sbjct: 77  TNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQYEEYLMYLKKP 136

[Close]
BLAST of MELO3C004853 vs. NCBI nr
Match: gi|527209894|gb|EPS74503.1| (hypothetical protein M569_00220, partial [Genlisea aurea])

HSP 1 Score: 292.4 bits (747), Expect = 9.0e-76
Identity = 178/328 (54.27%), Postives = 206/328 (62.80%), Query Frame = 1 

Query: 18  GQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNE 77
           GQHI +S  KARR+IDQIRGRSYEET++ILELM YR CY ILKLVYSAA+NA   +G ++
Sbjct: 13  GQHISISDDKARRIIDQIRGRSYEETLIILELMSYRACYPILKLVYSAASNARCILGSDK 72

Query: 78  RDLVISKAEVNQ---------------EEFKRYQYTINKPGGLITKEKYTDMTCYEMYTN 137
            +LVISKAEVN+                  K+    I      I+ ++Y DM     Y  
Sbjct: 73  ANLVISKAEVNKGTTRKKFQTRARGRSSAIKKATCHITIVVKDISLDEYEDM-----YPW 132

Query: 138 GGLWDKKKN-------------------------------------KNPLGFRLGATQGH 197
           GG   +K N                                     KN +  ++  T G+
Sbjct: 133 GGSMGQKINPLGFRLGTTQSHYSIWFSQPKKYSKDLQEDQKIRDFLKNYIQKKIRITSGN 192

Query: 198 HSLWFAHPKK---YSEVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRI 257
             +     +K     +VIIFMGFPKLLIE   R IEELQMN+QKE    NRKLNIAITRI
Sbjct: 193 EGIARIEIQKRIDLIQVIIFMGFPKLLIENRPRGIEELQMNIQKEFPYVNRKLNIAITRI 252

Query: 258 GNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVE 291
             PYG+P ILAEF+AGQLKNRVSFRKA+KKAIELTEQA TKGIQVQI+GRIDGKEIARVE
Sbjct: 253 PKPYGNPTILAEFLAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQISGRIDGKEIARVE 312

[Close]
BLAST of MELO3C004853 vs. NCBI nr
Match: gi|595645478|gb|AHM88937.1| (ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. NCBI nr
Match: gi|595645478|gb|AHM88937.1| (ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 219.2 bits (557), Expect = 9.7e-54
Identity = 121/200 (60.50%), Postives = 135/200 (67.50%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSEVI-------------------IFMGFPKLLIEGG 192
           NPLGFRLGATQGHHSLWFAHP+KYSE +                   IF G   +     
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEI 65

Query: 193 SRKIEELQMNV-----QKELNSGNRKLNIAITRI------------------GNPYGHPN 252
            ++I+ +Q+ +     +  +  G+RK+      +                  GNPYGHPN
Sbjct: 66  QKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPN 125

Query: 253 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 291
           ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP
Sbjct: 126 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 185


HSP 2 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. NCBI nr
Match: gi|346578230|ref|YP_004841822.1| (ribosomal protein S3 [Cucumis melo subsp. melo])

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 122/200 (61.00%), Postives = 135/200 (67.50%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSEVI-------------------IFMGFPKLLIEGG 192
           NPLGFRLGATQGHHSLWFAHPKKYSE +                   IF G   +     
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEI 65

Query: 193 SRKIEELQMNV-----QKELNSGNRKLNIAITRI------------------GNPYGHPN 252
            ++I+ +Q+ +     +  +  G+RK+      +                  GNPYGHPN
Sbjct: 66  QKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPN 125

Query: 253 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 291
           ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP
Sbjct: 126 ILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVP 185


HSP 2 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

[Close]
BLAST of MELO3C004853 vs. NCBI nr
Match: gi|595645302|gb|AHM88764.1| (ribosomal protein S3 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 60.8 bits (146), Expect = 4.4e-06
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 1 

Query: 133 NPLGFRLGATQGHHSLWFAHPKKYSE 159
           NPLGFRLGATQGHHSLWFAHP+KYSE
Sbjct: 6   NPLGFRLGATQGHHSLWFAHPQKYSE 31


HSP 2 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 158 EVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 217
           +VIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA
Sbjct: 73  QVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIA 132

Query: 218 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 277
           GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK
Sbjct: 133 GQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAK 192

Query: 278 IDYCCYPVRTIYG 291
           IDYCCYPVRTIYG
Sbjct: 193 IDYCCYPVRTIYG 205

The following BLAST results are available for this feature:
BLAST of MELO3C004853 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR3_CUCSA2.0e-6795.4930S ribosomal protein S3, chloroplastic OS=Cucumis sativus GN=rps3 PE=3 SV=1[more]
RR3_GOSHI6.3e-6189.4730S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum GN=rps3 PE=3 SV=1[more]
RR3_GOSBA6.3e-6189.4730S ribosomal protein S3, chloroplastic OS=Gossypium barbadense GN=rps3 PE=3 SV=... [more]
RR3_EUCGG6.3e-6187.9730S ribosomal protein S3, chloroplastic OS=Eucalyptus globulus subsp. globulus G... [more]
RR3_MORIN8.2e-6189.4730S ribosomal protein S3, chloroplastic OS=Morus indica GN=rps3 PE=3 SV=1[more]
BLAST of MELO3C004853 vs. TrEMBL
Match NameE-valueIdentityDescription
S8EET6_9LAMI6.3e-7654.27Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00220 PE=3 SV=1[more]
G3ETT6_CUCME8.2e-6899.2530S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. melo GN=rps3 PE=3... [more]
G3ETT6_CUCME2.3e-5461.0030S ribosomal protein S3, chloroplastic OS=Cucumis melo subsp. melo GN=rps3 PE=3... [more]
X2EYC6_LAGSI3.1e-0696.1530S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria GN=rps3 PE=3 SV=1[more]
X2F0P5_LAGSI6.7e-5460.5030S ribosomal protein S3, chloroplastic OS=Lagenaria siceraria GN=rps3 PE=3 SV=1[more]
BLAST of MELO3C004853 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00800.13.9e-6187.97ATCG00800.1 structural constituent of ribosome[more]
ATCG00810.12.5e-3152.38ATCG00810.1 ribosomal protein L22[more]
BLAST of MELO3C004853 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|527209894|gb|EPS74503.1|9.0e-7654.27hypothetical protein M569_00220, partial [Genlisea aurea][more]
gi|595645478|gb|AHM88937.1|1.2e-6799.25ribosomal protein S3 (chloroplast) [Lagenaria siceraria][more]
gi|595645478|gb|AHM88937.1|9.7e-5460.50ribosomal protein S3 (chloroplast) [Lagenaria siceraria][more]
gi|346578230|ref|YP_004841822.1|3.3e-5461.00ribosomal protein S3 [Cucumis melo subsp. melo][more]
gi|595645302|gb|AHM88764.1|4.4e-0696.15ribosomal protein S3 (chloroplast) [Lagenaria siceraria][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001063Ribosomal_L22
IPR001351Ribosomal_S3_C
IPR005704Ribosomal_S3_bac
IPR009019KH_sf_prok-type
IPR015946KH_dom-like_a/b
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU63957melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004853T1MELO3C004853T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU63957MU63957transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001063Ribosomal protein L22/L17GENE3DG3DSA:3.90.470.10coord: 16..97
score: 4.4
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 19..98
score: 2.0
IPR001063Ribosomal protein L22/L17unknownSSF54843Ribosomal protein L22coord: 15..91
score: 5.1
IPR001351Ribosomal protein S3, C-terminalGENE3DG3DSA:3.30.1140.32coord: 204..290
score: 3.5
IPR001351Ribosomal protein S3, C-terminalunknownSSF54821Ribosomal protein S3 C-terminal domaincoord: 204..290
score: 1.7
IPR005704Ribosomal protein S3, bacterialTIGRFAMsTIGR01009TIGR01009coord: 158..290
score: 3.2
IPR009019K homology domain, prokaryotic typeunknownSSF54814Prokaryotic type KH domain (KH-domain type II)coord: 133..197
score: 7.41
IPR015946K homology domain-like, alpha/betaGENE3DG3DSA:3.30.300.20coord: 158..202
score: 3.
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 133..290
score: 2.1
NoneNo IPR availablePANTHERPTHR11760:SF1930S RIBOSOMAL PROTEIN S3, CHLOROPLASTICcoord: 133..290
score: 2.1
NoneNo IPR availablePFAMPF00189Ribosomal_S3_Ccoord: 216..290
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004853Wax gourdmewgoB174
MELO3C004853Cucumber (Gy14) v1cgymeB365
MELO3C004853Cucurbita maxima (Rimu)cmameB148
MELO3C004853Cucurbita maxima (Rimu)cmameB194
MELO3C004853Cucurbita moschata (Rifu)cmomeB138
MELO3C004853Cucurbita moschata (Rifu)cmomeB181
MELO3C004853Wild cucumber (PI 183967)cpimeB011
MELO3C004853Cucumber (Chinese Long) v2cumeB015
MELO3C004853Watermelon (Charleston Gray)mewcgB131
MELO3C004853Watermelon (97103) v1mewmB162
MELO3C004853Cucurbita pepo (Zucchini)cpemeB480
MELO3C004853Cucurbita pepo (Zucchini)cpemeB744
MELO3C004853Bottle gourd (USVL1VR-Ls)lsimeB244
MELO3C004853Cucumber (Gy14) v2cgybmeB010
MELO3C004853Silver-seed gourdcarmeB0171
MELO3C004853Cucumber (Chinese Long) v3cucmeB010
MELO3C004853Watermelon (97103) v2mewmbB134