MELO3C004599 (gene) Melon (DHL92) v3.5.1

NameMELO3C004599
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAcid phosphatase 1
Locationchr5 : 27877013 .. 27877162 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTACAAATCAGAAAAGAGAGGTGAATTAGTGAAAAAAGGATACACAATCCAAGGAAGCTCTGGAGACCAATGGAGTGATTTGATGGGATTTGCTCTAGCAAAACGATCATTCAAGCTTCCAAACCCAATGTACTATGTGTCTTAA

mRNA sequence

ATGGAGTACAAATCAGAAAAGAGAGGTGAATTAGTGAAAAAAGGATACACAATCCAAGGAAGCTCTGGAGACCAATGGAGTGATTTGATGGGATTTGCTCTAGCAAAACGATCATTCAAGCTTCCAAACCCAATGTACTATGTGTCTTAA

Coding sequence (CDS)

ATGGAGTACAAATCAGAAAAGAGAGGTGAATTAGTGAAAAAAGGATACACAATCCAAGGAAGCTCTGGAGACCAATGGAGTGATTTGATGGGATTTGCTCTAGCAAAACGATCATTCAAGCTTCCAAACCCAATGTACTATGTGTCTTAA

Protein sequence

MEYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS*
BLAST of MELO3C004599 vs. Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.6e-12
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKSE+R  +V++G+ I G+SGDQWSDL+G +++ RSFKLPNPMYY+
Sbjct: 209 YKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254

BLAST of MELO3C004599 vs. Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.0e-08
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1

Query: 1   MEYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAK-RSFKLPNPMYYV 49
           + YKS  R  L+++GY I G  GDQWSDL+G    + R+FKLPNPMYY+
Sbjct: 205 LSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPMYYI 253

BLAST of MELO3C004599 vs. Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 6.9e-08
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKS+ R  LVKKGY I G+ GDQW+DL+      R FKLPNP+YYV
Sbjct: 224 YKSKVRNSLVKKGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 268

BLAST of MELO3C004599 vs. Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.0e-08
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1

Query: 1   MEYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAK-RSFKLPNPMYYV 49
           + YK+  R +L+++GY I G  GDQWSDL+G    + R+FKLPNP+YY+
Sbjct: 205 VSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNPLYYI 253

BLAST of MELO3C004599 vs. Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-07
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKS+ R  LVKKGY I G+ GDQW+DL+      R FKLPNP+YYV
Sbjct: 219 YKSKVRKSLVKKGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 263

BLAST of MELO3C004599 vs. TrEMBL
Match: A0A0A0LKQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000740 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.1e-16
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1

Query: 1   MEYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYY 48
           +EYKSEKR ELV +GYTIQGSSGDQWSDLMGFALAKRSFKLPNP+YY
Sbjct: 202 IEYKSEKRAELVNQGYTIQGSSGDQWSDLMGFALAKRSFKLPNPIYY 248

BLAST of MELO3C004599 vs. TrEMBL
Match: W9S6E0_9ROSA (Acid phosphatase 1 OS=Morus notabilis GN=L484_006982 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.1e-15
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR ELV +GYTI GSSGDQWSDLMGFA+A+RSFKLPNPMYY++
Sbjct: 213 YKSEKRSELVNEGYTIHGSSGDQWSDLMGFAVAQRSFKLPNPMYYIA 259

BLAST of MELO3C004599 vs. TrEMBL
Match: A0A059CN35_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C00961 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.0e-15
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR EL  +GYTI GSSGDQWSDL+GFA+AKRSFKLPNPMYY+S
Sbjct: 289 YKSEKRSELESQGYTIHGSSGDQWSDLLGFAIAKRSFKLPNPMYYIS 335

BLAST of MELO3C004599 vs. TrEMBL
Match: A0A061GMG3_THECC (HAD superfamily isoform 2 OS=Theobroma cacao GN=TCM_037750 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-14
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR +LV +GY I GSSGDQWSDL+GFA+AKRSFKLPNPMYY+S
Sbjct: 212 YKSEKRSDLVNEGYRIHGSSGDQWSDLLGFAVAKRSFKLPNPMYYIS 258

BLAST of MELO3C004599 vs. TrEMBL
Match: A0A061GN76_THECC (HAD superfamily isoform 1 OS=Theobroma cacao GN=TCM_037750 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-14
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR +LV +GY I GSSGDQWSDL+GFA+AKRSFKLPNPMYY+S
Sbjct: 277 YKSEKRSDLVNEGYRIHGSSGDQWSDLLGFAVAKRSFKLPNPMYYIS 323

BLAST of MELO3C004599 vs. TAIR10
Match: AT4G29270.1 (AT4G29270.1 HAD superfamily, subfamily IIIB acid phosphatase )

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-17
Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 1

Query: 2   EYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           +YKSE+R ++VK+GYTI G++GDQWSDL+GFA+A RSFK+PNPMYYV+
Sbjct: 209 QYKSEQRSQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA 256

BLAST of MELO3C004599 vs. TAIR10
Match: AT4G25150.1 (AT4G25150.1 HAD superfamily, subfamily IIIB acid phosphatase )

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-16
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKSEKR E+VK+GY I+G+SGDQWSDL+G A+++RSFKLPNPMYY+
Sbjct: 214 YKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYI 259

BLAST of MELO3C004599 vs. TAIR10
Match: AT4G29260.1 (AT4G29260.1 HAD superfamily, subfamily IIIB acid phosphatase )

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-15
Identity = 31/46 (67.39%), Postives = 40/46 (86.96%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKSE+R +L+++G+ I+G+SGDQWSDL GFA+A RSFK+PNPMYY+
Sbjct: 209 YKSEQRSKLIEEGFKIRGNSGDQWSDLQGFAVADRSFKVPNPMYYI 254

BLAST of MELO3C004599 vs. TAIR10
Match: AT5G51260.1 (AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase )

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-15
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKSEKR E+VK+GY I+G+SGDQWSDL+G ++++RSFKL NPMYY+
Sbjct: 211 YKSEKRDEMVKEGYRIRGNSGDQWSDLLGTSMSQRSFKLANPMYYI 256

BLAST of MELO3C004599 vs. TAIR10
Match: AT2G38600.1 (AT2G38600.1 HAD superfamily, subfamily IIIB acid phosphatase )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-09
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YK+  R E++++GY I G+ GDQWSDL G     R+FK+PNPMY+V
Sbjct: 205 YKTRIRKEMMEEGYRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYFV 250

BLAST of MELO3C004599 vs. NCBI nr
Match: gi|449446809|ref|XP_004141163.1| (PREDICTED: acid phosphatase 1-like [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-16
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1

Query: 1   MEYKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYY 48
           +EYKSEKR ELV +GYTIQGSSGDQWSDLMGFALAKRSFKLPNP+YY
Sbjct: 202 IEYKSEKRAELVNQGYTIQGSSGDQWSDLMGFALAKRSFKLPNPIYY 248

BLAST of MELO3C004599 vs. NCBI nr
Match: gi|703154154|ref|XP_010110867.1| (Acid phosphatase 1 [Morus notabilis])

HSP 1 Score: 88.2 bits (217), Expect = 4.4e-15
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR ELV +GYTI GSSGDQWSDLMGFA+A+RSFKLPNPMYY++
Sbjct: 213 YKSEKRSELVNEGYTIHGSSGDQWSDLMGFAVAQRSFKLPNPMYYIA 259

BLAST of MELO3C004599 vs. NCBI nr
Match: gi|629114931|gb|KCW79606.1| (hypothetical protein EUGRSUZ_C00961, partial [Eucalyptus grandis])

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-15
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR EL  +GYTI GSSGDQWSDL+GFA+AKRSFKLPNPMYY+S
Sbjct: 289 YKSEKRSELESQGYTIHGSSGDQWSDLLGFAIAKRSFKLPNPMYYIS 335

BLAST of MELO3C004599 vs. NCBI nr
Match: gi|702293360|ref|XP_010047662.1| (PREDICTED: acid phosphatase 1-like [Eucalyptus grandis])

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-15
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYVS 50
           YKSEKR EL  +GYTI GSSGDQWSDL+GFA+AKRSFKLPNPMYY+S
Sbjct: 224 YKSEKRSELESQGYTIHGSSGDQWSDLLGFAIAKRSFKLPNPMYYIS 270

BLAST of MELO3C004599 vs. NCBI nr
Match: gi|659071289|ref|XP_008459056.1| (PREDICTED: acid phosphatase 1-like [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-14
Identity = 37/46 (80.43%), Postives = 45/46 (97.83%), Query Frame = 1

Query: 3   YKSEKRGELVKKGYTIQGSSGDQWSDLMGFALAKRSFKLPNPMYYV 49
           YKSEKR E+VK+GYTIQG++GDQWSDL+G+A++KRSFKLPNPMYYV
Sbjct: 183 YKSEKRAEIVKQGYTIQGNTGDQWSDLIGYAVSKRSFKLPNPMYYV 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPA1_SOLLC4.6e-1263.04Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1[more]
VSPB_SOYBN4.0e-0855.10Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1[more]
VSP1_ARATH6.9e-0860.87Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=1 SV=2[more]
VSPA_SOYBN9.0e-0851.02Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1[more]
VSP2_ARATH1.2e-0760.87Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LKQ3_CUCSA2.1e-1689.36Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000740 PE=4 SV=1[more]
W9S6E0_9ROSA3.1e-1582.98Acid phosphatase 1 OS=Morus notabilis GN=L484_006982 PE=4 SV=1[more]
A0A059CN35_EUCGR4.0e-1582.98Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C00961 PE=4 ... [more]
A0A061GMG3_THECC1.2e-1480.85HAD superfamily isoform 2 OS=Theobroma cacao GN=TCM_037750 PE=4 SV=1[more]
A0A061GN76_THECC1.2e-1480.85HAD superfamily isoform 1 OS=Theobroma cacao GN=TCM_037750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29270.18.6e-1770.83 HAD superfamily, subfamily IIIB acid phosphatase [more]
AT4G25150.14.3e-1673.91 HAD superfamily, subfamily IIIB acid phosphatase [more]
AT4G29260.16.2e-1567.39 HAD superfamily, subfamily IIIB acid phosphatase [more]
AT5G51260.16.2e-1569.57 HAD superfamily, subfamily IIIB acid phosphatase [more]
AT2G38600.11.3e-0954.35 HAD superfamily, subfamily IIIB acid phosphatase [more]
Match NameE-valueIdentityDescription
gi|449446809|ref|XP_004141163.1|3.1e-1689.36PREDICTED: acid phosphatase 1-like [Cucumis sativus][more]
gi|703154154|ref|XP_010110867.1|4.4e-1582.98Acid phosphatase 1 [Morus notabilis][more]
gi|629114931|gb|KCW79606.1|5.8e-1582.98hypothetical protein EUGRSUZ_C00961, partial [Eucalyptus grandis][more]
gi|702293360|ref|XP_010047662.1|5.8e-1582.98PREDICTED: acid phosphatase 1-like [Eucalyptus grandis][more]
gi|659071289|ref|XP_008459056.1|1.3e-1480.43PREDICTED: acid phosphatase 1-like [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005519Acid_phosphat_B-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006771 riboflavin metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003993 acid phosphatase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004599T1MELO3C004599T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005519Acid phosphatase, class B-likePFAMPF03767Acid_phosphat_Bcoord: 2..48
score: 6.5
NoneNo IPR availablePANTHERPTHR31284FAMILY NOT NAMEDcoord: 1..49
score: 4.3
NoneNo IPR availablePANTHERPTHR31284:SF14ACID PHOSPHATASE-LIKE PROTEINcoord: 1..49
score: 4.3

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004599Silver-seed gourdcarmeB0039
MELO3C004599Silver-seed gourdcarmeB0097
MELO3C004599Silver-seed gourdcarmeB0209
MELO3C004599Silver-seed gourdcarmeB0577
MELO3C004599Silver-seed gourdcarmeB0883
MELO3C004599Silver-seed gourdcarmeB0885
MELO3C004599Cucumber (Chinese Long) v3cucmeB074
MELO3C004599Cucumber (Chinese Long) v3cucmeB142
MELO3C004599Watermelon (97103) v2mewmbB373
MELO3C004599Watermelon (97103) v2mewmbB380
MELO3C004599Watermelon (97103) v2mewmbB404
MELO3C004599Wax gourdmewgoB460
MELO3C004599Wax gourdmewgoB471
MELO3C004599Wax gourdmewgoB494
MELO3C004599Melon (DHL92) v3.5.1memeB105
MELO3C004599Melon (DHL92) v3.5.1memeB136
MELO3C004599Cucumber (Gy14) v1cgymeB172
MELO3C004599Cucumber (Gy14) v1cgymeB483
MELO3C004599Cucurbita maxima (Rimu)cmameB074
MELO3C004599Cucurbita maxima (Rimu)cmameB129
MELO3C004599Cucurbita maxima (Rimu)cmameB172
MELO3C004599Cucurbita maxima (Rimu)cmameB180
MELO3C004599Cucurbita maxima (Rimu)cmameB735
MELO3C004599Cucurbita moschata (Rifu)cmomeB067
MELO3C004599Cucurbita moschata (Rifu)cmomeB121
MELO3C004599Cucurbita moschata (Rifu)cmomeB161
MELO3C004599Cucurbita moschata (Rifu)cmomeB169
MELO3C004599Cucurbita moschata (Rifu)cmomeB724
MELO3C004599Wild cucumber (PI 183967)cpimeB069
MELO3C004599Wild cucumber (PI 183967)cpimeB140
MELO3C004599Cucumber (Chinese Long) v2cumeB069
MELO3C004599Cucumber (Chinese Long) v2cumeB140
MELO3C004599Watermelon (Charleston Gray)mewcgB372
MELO3C004599Watermelon (Charleston Gray)mewcgB378
MELO3C004599Watermelon (Charleston Gray)mewcgB401
MELO3C004599Watermelon (97103) v1mewmB401
MELO3C004599Watermelon (97103) v1mewmB409
MELO3C004599Watermelon (97103) v1mewmB421
MELO3C004599Cucurbita pepo (Zucchini)cpemeB099
MELO3C004599Cucurbita pepo (Zucchini)cpemeB343
MELO3C004599Cucurbita pepo (Zucchini)cpemeB527
MELO3C004599Cucurbita pepo (Zucchini)cpemeB633
MELO3C004599Cucurbita pepo (Zucchini)cpemeB772
MELO3C004599Cucurbita pepo (Zucchini)cpemeB782
MELO3C004599Bottle gourd (USVL1VR-Ls)lsimeB116
MELO3C004599Bottle gourd (USVL1VR-Ls)lsimeB413
MELO3C004599Bottle gourd (USVL1VR-Ls)lsimeB442
MELO3C004599Cucumber (Gy14) v2cgybmeB063
MELO3C004599Cucumber (Gy14) v2cgybmeB121
MELO3C004599Cucumber (Gy14) v2cgybmeB199