MELO3C004586 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTTATATATAATACTCATATTGTAGCTAAGGAAAATATTGAAATCTTCTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTCTGAACAACTTGTATTCAACGATTACTAAGAGCAGACAAATTTTTAATGTTTATCGTTCTAACGAATC ACTTATATATAATACTCATATTGTAGCTAAGGAAAATATTGAAATCTTCTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTCTGAACAACTTGTATTCAACGATTACTAAGAGCAGACAAATTTTTAATGTTTATCGTTCTAACGAATC ATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAG MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV*
BLAST of MELO3C004586 vs. Swiss-Prot
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 68.2 bits (165), Expect = 6.9e-11 Identity = 31/85 (36.47%), Postives = 43/85 (50.59%), Query Frame = 1
BLAST of MELO3C004586 vs. Swiss-Prot
Match: RN115_MOUSE (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 1
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_RAT (E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10 Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_PONAB (E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10 Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_MOUSE (E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10 Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A0A0LEZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000920 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 2.1e-54 Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 1
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A0A0LKR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000930 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.5e-24 Identity = 60/95 (63.16%), Postives = 67/95 (70.53%), Query Frame = 1
BLAST of MELO3C004586 vs. TrEMBL
Match: D7TBH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03190 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A067KCF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07378 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.9e-15 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A067KPM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07310 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.2e-15 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1
BLAST of MELO3C004586 vs. TAIR10
Match: AT4G26400.2 (AT4G26400.2 RING/U-box superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11 Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 1
BLAST of MELO3C004586 vs. TAIR10
Match: AT3G60080.1 (AT3G60080.1 RING/U-box superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11 Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 1
BLAST of MELO3C004586 vs. TAIR10
Match: AT2G39720.1 (AT2G39720.1 RING-H2 finger C2A) HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11 Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 1
BLAST of MELO3C004586 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11 Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 1
BLAST of MELO3C004586 vs. TAIR10
Match: AT2G44330.1 (AT2G44330.1 RING/U-box superfamily protein) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|778673949|ref|XP_011650093.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 3.0e-54 Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 1
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|449466270|ref|XP_004150849.1| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 60/95 (63.16%), Postives = 67/95 (70.53%), Query Frame = 1
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|731406754|ref|XP_003633119.2| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Vitis vinifera]) HSP 1 Score: 92.0 bits (227), Expect = 7.1e-16 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|643724606|gb|KDP33807.1| (hypothetical protein JCGZ_07378 [Jatropha curcas]) HSP 1 Score: 90.1 bits (222), Expect = 2.7e-15 Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|643724538|gb|KDP33739.1| (hypothetical protein JCGZ_07310 [Jatropha curcas]) HSP 1 Score: 89.0 bits (219), Expect = 6.0e-15 Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |