MELO3C004499 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004499
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	EIN3-binding F-box protein 1
Location	chr5 : 27057352 .. 27060274 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCACAAATTTCTCTTCTTTCTTCTCTTTTTTCCCCTTTTCTCTATTGGGGTTTTCTGCAAAATGCTCTTCTTCTTCTTCTTCTTCTTTCTCATAATTCTCATTTGCGTTTTCTTCAACCTCTTGTTTGTGGGAAGCTTCTCTTTTCTCTTCTTCTCCTTCGTTGCTCTGTTGCTGTCCCCATGCCTGCCCTCGTCAATTAGGTGGTGAGTTCTTTGATCTTTTCTATTTTGATATTCTTTCATCTGGGTAGGAGTTGAATCGGTTTAATTTGATGGGTTTGGGGTATTTGTTTTGTTTATGACTTTGTTTTTGAGGTTTTGTGATGATGTGATCTGGGCTTGTTTGAGGATGGTTGATTTTTTATGGAAAAGTATGGTATTTTAGATATCTTAAGCTAGTTTGTTCTTTGATGAGAGTAGTTTGAAGATTTCTAGTTTATGCATCTTGTTAAATGTCTCTTAGTTAGGTTTGTAATGGATCTAGTTCTTTGAGAGAGATTGTTCTGATGATGGAATTTATTTAGTGATGAACCGAATAGGTTGAACTTTTTTGGAGAGAAGAGGTGTGCAATTTTGGCTGATTTGTTGTTGTTGGTGGTGTTATTGGGTTTTCAGGTGATGATGAATATTACCCTGGGGGTTCCTTTTATTCGAACCCCATGGATTTGGATGCATTTCTACCAACTTCCTCTCATGTCGATCTGTATTTTTGTCCTAGTAAGAGAGCTCTAATCTGTGCGCCGGTTGTGTTTGGAGGAGGAGAATTTGAGCAGGACTGTACGCCATCCATTCAAGCTCTTCCCGATGAATGTCTCTTTGAGATTTTCAGGCATCCCCACAGTGCTAGAGAGAGGAGCTCTTGTGCCGGTGTCTCGAAACGGTGGCTTATGCTTTTGAGTACTATTCGTAAGGCTGAAATTTGCAAGAGCAGAAGCACATGTATCAGTCAGATGGTTGAGTGCTCAAATGTTGAGCAGCAGAATACTGAATTTGATGAAAGATTTCGGTAGTGAACTGTGATGAAGATCAAGAGGATGAAAGTAATGGTTTTCTTACAAGATGTTTGGACGGCAAGAAAGCTACTGATGTTAGACTTGCTGCTATTGCAGTAGGAACTAGTGGACGAGGGGGATTGGGAAACTTTCAATTTGAGGAAGTAACTCTACTCGTGGAGTTACCAACCTTGGTCTTTCGGCCATTGCCTACAGTTGCCCTTCTCTTTGGATGCTTTCTCTGTGGAATGTACCTGTTGGAACCCAATCTCCAACACAGATTTAAGGTATGAATGAAATCAAATCTTTACTGCTTATCAGTAGAATTCAATTACAATCAAAGAATCGAATTGAATAATGAATTCAATTCGATGACTACAATGCTAGGCTCTCAATATACCTGCAGAATATCAACCAACATACACATACACAATAGAGATATTCCTATCCAGCTACTCAAACACAGCTATTCATATTTGGAGTGGTGTTTTAACTGATAATATGAAAGATGATATTTCCTTCATGGAGTGATGAGTTTTTGTTCTGCAAAAATACTTTCAGCTTCTCTTATGAAGAGGCTTGAGTGATTCTAATTTAGAGATTCTTTTTAATTGGGAAATTGCTTTCTAGACAGAATTTCTTAATCTGCAATTAAGGAACCTTGGAAAGTGAAAGAAATATCAGTTGGTTCTTACTTCTTAGTAAGTGTTCAGGTCTGAAAAAATAAGGGGAAAATGAAGTAGCTTCATTTTTCTTCCATGAATTGAACCTCATGGATTAGTAGTTGTTTGCATCATTGAAGTCTATTCTTGCTCCAAGAAGTCAGCTTTTTAGAACTGGGTTGTACTGGACTTTGGAATGCTAGTTTTTGGATGGTCAAAAGAGTTGCAAGTGGTGAGAACGTGTTCAATGCATATATCCTTGGTTCCTTGGTTCATTAACTAATTGATCTTTTATCTTGGTTATAATTTTTCATGTTTCATTGTCAGTGTTTAGGTTCATGACATCGGGGTTTAAGTTTTCCTAAGATATATTCAATGATCTGTATACATGCATAGTTTATTTCAAACTTCATTGAGGGCCTGGAACCATGTTAGTGGATTCTTCTCTTGATTTAAAGTATGGCTGTGATATTCATGCATTTGCATTTGCATTTTTTATTTTTAGTAAGTGTCAGTTCTTTGTAAGCCTTTAAGAAGGCATTTTAATTTATTATTCTTATATGAAAAAAAAGAAATGAGTTTTTCTGGCCTGGCCTCCTGAATTTTTGTTTCTGTATCCATAAGTCTAAAATTTCTCCAAAAGTTGCTTTGTTTTTATTTACAATTGGTATATGACTAAAGAACTATTGTTGGAAACCAGAAAAAGCCTTACCATCGATGCATACCTTTACTTTTTCTATGTTTTCTGGTGTTTTTCTTTAGTTGAGATATTAAAACCATAATATAATTAACAGGAAATGGTAGACTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTATATTATTAAGCCGCTCAATTGAAAGAACAATCACCTTGTGCATACACTATCCTTGTGACTTTTTTCTTTCGTGTTTTGGAGTTCAATTCCGTGCCTACCACCTTAACTTGGGATCAATTCGATACAAGTTTAACATACAAAATGACACCATTGGTTTGCTAACCTTTTCGATATTGCTACTACATTGGAGATCTCTAAGGGGAGGGGCCAATTGTGAACTAACCCAAAATCAAAGATCTTCCAATTGATCGGCGAGCTAAATGGTAAGCCCCCTCCGACCAATATACTTTATACATACATATCAAACTTTCTTCATCATTAGTTTAATATATGATGAAGCATCAACTTTGCAGTGTGTTTGATGCAATGTTGTTGATGATTGACTTGTTGTAATTGATGTAAAAGAATAGATAATAATTAATCTCTC

mRNA sequence

ACTTCACAAATTTCTCTTCTTTCTTCTCTTTTTTCCCCTTTTCTCTATTGGGGTTTTCTGCAAAATGCTCTTCTTCTTCTTCTTCTTCTTTCTCATAATTCTCATTTGCGTTTTCTTCAACCTCTTGTTTGTGGGAAGCTTCTCTTTTCTCTTCTTCTCCTTCGTTGCTCTGTTGCTGTCCCCATGCCTGCCCTCGTCAATTAGGTGGTGATGATGAATATTACCCTGGGGGTTCCTTTTATTCGAACCCCATGGATTTGGATGCATTTCTACCAACTTCCTCTCATGTCGATCTGTATTTTTGTCCTAGTAAGAGAGCTCTAATCTGTGCGCCGGTTGTGTTTGGAGGAGGAGAATTTGAGCAGGACTGTACGCCATCCATTCAAGCTCTTCCCGATGAATGTCTCTTTGAGATTTTCAGGCATCCCCACAGTGCTAGAGAGAGGAGCTCTTGTGCCGGTGTCTCGAAACGGTGGCTTATGCTTTTGAGTACTATTCGTAAGGCTGAAATTTGCAAGAGCAGAAGCACATGTATCAGTCAGATGGTTGAGTGCTCAAATGTTGAGCAGCAGAATACTGAATTTGATGAAAGATTTCGGTAGTGAACTGTGATGAAGATCAAGAGGATGAAAGTAATGGTTTTCTTACAAGATGTTTGGACGGCAAGAAAGCTACTGATGTTAGACTTGCTGCTATTGCAGTAGGAACTAGTGGACGAGGGGGATTGGGAAACTTTCAATTTGAGGAAGTAACTCTACTCGTGGAGTTACCAACCTTGGTCTTTCGGCCATTGCCTACAGTTGCCCTTCTCTTTGGATGCTTTCTCTGTGGAATGTACCTGTTGGAACCCAATCTCCAACACAGATTTAAGGAAATGGTAGACTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTATATTATTAAGCCGCTCAATTGAAAGAACAATCACCTTGTGCATACACTATCCTTGTGACTTTTTTCTTTCGTGTTTTGGAGTTCAATTCCGTGCCTACCACCTTAACTTGGGATCAATTCGATACAAGTTTAACATACAAAATGACACCATTGGTTTGCTAACCTTTTCGATATTGCTACTACATTGGAGATCTCTAAGGGGAGGGGCCAATTGTGAACTAACCCAAAATCAAAGATCTTCCAATTGATCGGCGAGCTAAATGGTAAGCCCCCTCCGACCAATATACTTTATACATACATATCAAACTTTCTTCATCATTAGTTTAATATATGATGAAGCATCAACTTTGCAGTGTGTTTGATGCAATGTTGTTGATGATTGACTTGTTGTAATTGATGTAAAAGAATAGATAATAATTAATCTCTC

Coding sequence (CDS)

ATGGATTTGGATGCATTTCTACCAACTTCCTCTCATGTCGATCTGTATTTTTGTCCTAGTAAGAGAGCTCTAATCTGTGCGCCGGTTGTGTTTGGAGGAGGAGAATTTGAGCAGGACTGTACGCCATCCATTCAAGCTCTTCCCGATGAATGTCTCTTTGAGATTTTCAGGCATCCCCACAGTGCTAGAGAGAGGAGCTCTTGTGCCGGTGTCTCGAAACGGTGGCTTATGCTTTTGAGTACTATTCGTAAGGCTGAAATTTGCAAGAGCAGAAGCACATGTATCAGTCAGATGGTTGAGTGCTCAAATGTTGAGCAGCAGAATACTGAATTTGATGAAAGATTTCGGTAG

Protein sequence

MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHSARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFDERFR*

Homology

[Close]

BLAST of MELO3C004499 vs. Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1


Query: 2   DLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHS 61
           D    L   S  D+YF PSKR+ + AP +F   E +     SI  LPDECLFEIFR    
Sbjct: 25  DASLLLSLGSFADVYFPPSKRSRVVAPTIFSAFEKKP---VSIDVLPDECLFEIFRRLSG 84

Query: 62  ARERSSCAGVSKRWLMLLSTIRKAEI 88
            +ERS+CA VSK+WL L+S+IR+ EI
Sbjct: 85  PQERSACAFVSKQWLTLVSSIRQKEI 107

[Close]

BLAST of MELO3C004499 vs. Swiss-Prot
Match: EBF2_ARATH (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.9e-10
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1


Query: 6   FLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHSARER 65
           +L   S   +Y+   KR  + A   + G E +Q    SI  LP+ECLFEI R   S +ER
Sbjct: 20  YLSPGSCPGVYYPARKRLRVAATSFYSGFEEKQT---SIDVLPEECLFEILRRLPSGQER 79

Query: 66  SSCAGVSKRWLMLLSTIRKAEICKS 91
           S+CA VSK WL LLS+I ++E+ +S
Sbjct: 80  SACACVSKHWLNLLSSISRSEVNES 101

[Close]

BLAST of MELO3C004499 vs. TrEMBL
Match: A0A0A0LI26_CUCSA (Grr1 OS=Cucumis sativus GN=Csa_2G006790 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-50
Identity = 102/113 (90.27%), Postives = 105/113 (92.92%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDLDAFLPTSSHVDLYF PSKRA I +PVVFGG EFEQ+CTPSI+ALPDECLFEIFRH H
Sbjct: 24  MDLDAFLPTSSHVDLYFHPSKRARIGSPVVFGGREFEQECTPSIEALPDECLFEIFRHLH 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFDE 114
           SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVE SNVEQQ TE DE
Sbjct: 84  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVESSNVEQQKTESDE 136

[Close]

BLAST of MELO3C004499 vs. TrEMBL
Match: B9SET7_RICCO (Grr1, plant, putative OS=Ricinus communis GN=RCOM_0224460 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-22
Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDL  +    SHVD Y  P KRA I +P +FG  EFEQ+  PSI  LPDECLFEIFR   
Sbjct: 24  MDLGRYYSIGSHVDAYSPPCKRARISSPFLFGSSEFEQNKQPSIDVLPDECLFEIFRRIP 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFD 113
             +ERS+CA VSKRWL LLS+IR+AE+C  R       VE ++   +N E +
Sbjct: 84  GGKERSACACVSKRWLTLLSSIRRAELCNERIVPGCNDVEMASSCDENGEIE 135

[Close]

BLAST of MELO3C004499 vs. TrEMBL
Match: A0A061GMI6_THECC (Ein3-binding f-box protein 4 OS=Theobroma cacao GN=TCM_038093 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-20
Identity = 56/112 (50.00%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 2   DLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHS 61
           DL      SS VD+Y  P KRA ICAP +FG  EFEQ+  PSI  LP+ECLFEIF+    
Sbjct: 72  DLGRLCSISSQVDVYCPPRKRARICAPFLFGETEFEQNKQPSIDVLPEECLFEIFKRLPG 131

Query: 62  ARERSSCAGVSKRWLMLLSTIRKAE-----ICKSRSTCISQMVECSNVEQQN 109
            RERSSCA VSK WLMLL++IRK+E     + K  +  +S+ VE  + ++ +
Sbjct: 132 GRERSSCACVSKHWLMLLTSIRKSEYESSKVVKENTDLVSEDVEMISSDEDD 183

[Close]

BLAST of MELO3C004499 vs. TrEMBL
Match: A0A151SCH7_CAJCA (EIN3-binding F-box protein 1 OS=Cajanus cajan GN=KK1_025640 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-20
Identity = 56/100 (56.00%), Postives = 67/100 (67.00%), Query Frame = 1


Query: 6   FLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHSARER 65
           FLP    VD+YF P KR+ + AP VF G  FEQ    SI+ALPDECLFEIFR   +  +R
Sbjct: 26  FLPLGPQVDVYFPPRKRSRVNAPFVFDGEWFEQKQKTSIEALPDECLFEIFRRLPAGEDR 85

Query: 66  SSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVE 106
           S+CA VSKRWLMLLS+I K EIC ++S  I    E  +VE
Sbjct: 86  SACACVSKRWLMLLSSICKNEICVNKSVEIKSEKEGDDVE 125

[Close]

BLAST of MELO3C004499 vs. TrEMBL
Match: A0A067K8I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13342 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 11  SHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHSARERSSCAG 70
           S VD+Y  P KRA   +P +FG  +FEQ+  PSI  LPDECLFEIFR     +ERSSCA 
Sbjct: 30  SLVDIYSPPCKRARTSSPFLFGSSDFEQNKQPSIDVLPDECLFEIFRRIPGGKERSSCAC 89

Query: 71  VSKRWLMLLSTIRKAEICKSRSTCISQMVECS 103
           VSKRWL+LLS+I++AEIC+S++      V  S
Sbjct: 90  VSKRWLLLLSSIKRAEICESKTLVADNEVTVS 121

[Close]

BLAST of MELO3C004499 vs. TAIR10
Match: AT2G25490.1 (AT2G25490.1 EIN3-binding F box protein 1)

HSP 1 Score: 80.5 bits (197), Expect = 7.6e-16
Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1


Query: 2   DLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHS 61
           D    L   S  D+YF PSKR+ + AP +F   E +     SI  LPDECLFEIFR    
Sbjct: 25  DASLLLSLGSFADVYFPPSKRSRVVAPTIFSAFEKKP---VSIDVLPDECLFEIFRRLSG 84

Query: 62  ARERSSCAGVSKRWLMLLSTIRKAEI 88
            +ERS+CA VSK+WL L+S+IR+ EI
Sbjct: 85  PQERSACAFVSKQWLTLVSSIRQKEI 107

[Close]

BLAST of MELO3C004499 vs. TAIR10
Match: AT5G25350.1 (AT5G25350.1 EIN3-binding F box protein 2)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1


Query: 6   FLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPHSARER 65
           +L   S   +Y+   KR  + A   + G E +Q    SI  LP+ECLFEI R   S +ER
Sbjct: 20  YLSPGSCPGVYYPARKRLRVAATSFYSGFEEKQT---SIDVLPEECLFEILRRLPSGQER 79

Query: 66  SSCAGVSKRWLMLLSTIRKAEICKS 91
           S+CA VSK WL LLS+I ++E+ +S
Sbjct: 80  SACACVSKHWLNLLSSISRSEVNES 101

[Close]

BLAST of MELO3C004499 vs. NCBI nr
Match: gi|449443075|ref|XP_004139306.1| (PREDICTED: EIN3-binding F-box protein 1 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.5e-50
Identity = 102/113 (90.27%), Postives = 105/113 (92.92%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDLDAFLPTSSHVDLYF PSKRA I +PVVFGG EFEQ+CTPSI+ALPDECLFEIFRH H
Sbjct: 24  MDLDAFLPTSSHVDLYFHPSKRARIGSPVVFGGREFEQECTPSIEALPDECLFEIFRHLH 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFDE 114
           SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVE SNVEQQ TE DE
Sbjct: 84  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVESSNVEQQKTESDE 136

[Close]

BLAST of MELO3C004499 vs. NCBI nr
Match: gi|659070965|ref|XP_008457494.1| (PREDICTED: EIN3-binding F-box protein 1-like [Cucumis melo])

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-49
Identity = 100/109 (91.74%), Postives = 102/109 (93.58%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDLDAFLPTSSHVDLYF PSKRA I APVVFGG EFEQ+CTPSI+ALPDECLFEIFRH H
Sbjct: 24  MDLDAFLPTSSHVDLYFRPSKRARIGAPVVFGGREFEQECTPSIEALPDECLFEIFRHLH 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNT 110
           SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQ VECSNVEQQ T
Sbjct: 84  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQTVECSNVEQQKT 132

[Close]

BLAST of MELO3C004499 vs. NCBI nr
Match: gi|1009172151|ref|XP_015867115.1| (PREDICTED: EIN3-binding F-box protein 1-like [Ziziphus jujuba])

HSP 1 Score: 121.7 bits (304), Expect = 8.5e-25
Identity = 61/113 (53.98%), Postives = 74/113 (65.49%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDL+ F    SHVD+Y  PSKR  +  P  FGG  FEQD  PSI+ LPDECLFEI R  H
Sbjct: 24  MDLERFWSIGSHVDVYCPPSKRVRLSTPFAFGGSYFEQDKKPSIEVLPDECLFEILRRVH 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFDE 114
             +ERS+CA VSKRWLM LS+IR AEICKS+S    ++V  S    + +  D+
Sbjct: 84  GGKERSACACVSKRWLMSLSSIRLAEICKSKSQAADKVVVSSKSNSELSVSDD 136

[Close]

BLAST of MELO3C004499 vs. NCBI nr
Match: gi|1009180672|ref|XP_015871753.1| (PREDICTED: LOW QUALITY PROTEIN: EIN3-binding F-box protein 1-like [Ziziphus jujuba])

HSP 1 Score: 121.7 bits (304), Expect = 8.5e-25
Identity = 61/113 (53.98%), Postives = 74/113 (65.49%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDL+ F    SHVD+Y  PSKR  +  P  FGG  FEQD  PSI+ LPDECLFEI R  H
Sbjct: 1   MDLERFWSIGSHVDVYCPPSKRVRLSTPFAFGGSYFEQDKKPSIEVLPDECLFEILRRVH 60

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFDE 114
             +ERS+CA VSKRWLM LS+IR AEICKS+S    ++V  S    + +  D+
Sbjct: 61  GGKERSACACVSKRWLMSLSSIRLAEICKSKSQAADKVVVSSKSNSELSVSDD 113

[Close]

BLAST of MELO3C004499 vs. NCBI nr
Match: gi|255567047|ref|XP_002524506.1| (PREDICTED: EIN3-binding F-box protein 1 [Ricinus communis])

HSP 1 Score: 111.7 bits (278), Expect = 8.8e-22
Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 1   MDLDAFLPTSSHVDLYFCPSKRALICAPVVFGGGEFEQDCTPSIQALPDECLFEIFRHPH 60
           MDL  +    SHVD Y  P KRA I +P +FG  EFEQ+  PSI  LPDECLFEIFR   
Sbjct: 24  MDLGRYYSIGSHVDAYSPPCKRARISSPFLFGSSEFEQNKQPSIDVLPDECLFEIFRRIP 83

Query: 61  SARERSSCAGVSKRWLMLLSTIRKAEICKSRSTCISQMVECSNVEQQNTEFD 113
             +ERS+CA VSKRWL LLS+IR+AE+C  R       VE ++   +N E +
Sbjct: 84  GGKERSACACVSKRWLTLLSSIRRAELCNERIVPGCNDVEMASSCDENGEIE 135

The following BLAST results are available for this feature:

BLAST of MELO3C004499 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EBF1_ARATH	1.4e-14	50.00	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1	[more]
EBF2_ARATH	5.9e-10	43.53	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1	[more]

BLAST of MELO3C004499 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI26_CUCSA	3.1e-50	90.27	Grr1 OS=Cucumis sativus GN=Csa_2G006790 PE=4 SV=1	[more]
B9SET7_RICCO	6.1e-22	51.79	Grr1, plant, putative OS=Ricinus communis GN=RCOM_0224460 PE=4 SV=1	[more]
A0A061GMI6_THECC	7.5e-20	50.00	Ein3-binding f-box protein 4 OS=Theobroma cacao GN=TCM_038093 PE=4 SV=1	[more]
A0A151SCH7_CAJCA	7.5e-20	56.00	EIN3-binding F-box protein 1 OS=Cajanus cajan GN=KK1_025640 PE=4 SV=1	[more]
A0A067K8I2_JATCU	3.7e-19	55.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13342 PE=4 SV=1	[more]

BLAST of MELO3C004499 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25490.1	7.6e-16	50.00	EIN3-binding F box protein 1	[more]
AT5G25350.1	3.3e-11	43.53	EIN3-binding F box protein 2	[more]

BLAST of MELO3C004499 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443075\|ref\|XP_004139306.1\|	4.5e-50	90.27	PREDICTED: EIN3-binding F-box protein 1 [Cucumis sativus]	[more]
gi\|659070965\|ref\|XP_008457494.1\|	2.9e-49	91.74	PREDICTED: EIN3-binding F-box protein 1-like [Cucumis melo]	[more]
gi\|1009172151\|ref\|XP_015867115.1\|	8.5e-25	53.98	PREDICTED: EIN3-binding F-box protein 1-like [Ziziphus jujuba]	[more]
gi\|1009180672\|ref\|XP_015871753.1\|	8.5e-25	53.98	PREDICTED: LOW QUALITY PROTEIN: EIN3-binding F-box protein 1-like [Ziziphus juju...	[more]
gi\|255567047\|ref\|XP_002524506.1\|	8.8e-22	51.79	PREDICTED: EIN3-binding F-box protein 1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004499T1	MELO3C004499T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 44..78 score: 1.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 37..80 score: 2.0
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 41..80 score: 4.
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 10..114 score: 5.8
None	No IPR available	PANTHER	PTHR24006:SF501	SUBFAMILY NOT NAMED	coord: 10..114 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004499	Carg09918	Silver-seed gourd	carmeB0133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004499	Cucurbita moschata (Rifu)	cmomeB067
MELO3C004499	Cucurbita moschata (Rifu)	cmomeB121
MELO3C004499	Cucurbita moschata (Rifu)	cmomeB161
MELO3C004499	Cucurbita moschata (Rifu)	cmomeB724
MELO3C004499	Wild cucumber (PI 183967)	cpimeB140
MELO3C004499	Wild cucumber (PI 183967)	cpimeB563
MELO3C004499	Cucumber (Chinese Long) v2	cumeB140
MELO3C004499	Cucumber (Chinese Long) v2	cumeB556
MELO3C004499	Watermelon (Charleston Gray)	mewcgB361
MELO3C004499	Watermelon (Charleston Gray)	mewcgB372
MELO3C004499	Watermelon (Charleston Gray)	mewcgB384
MELO3C004499	Watermelon (Charleston Gray)	mewcgB396
MELO3C004499	Watermelon (Charleston Gray)	mewcgB401
MELO3C004499	Watermelon (Charleston Gray)	mewcgB406
MELO3C004499	Watermelon (97103) v1	mewmB395
MELO3C004499	Watermelon (97103) v1	mewmB400
MELO3C004499	Watermelon (97103) v1	mewmB409
MELO3C004499	Watermelon (97103) v1	mewmB412
MELO3C004499	Watermelon (97103) v1	mewmB421
MELO3C004499	Watermelon (97103) v1	mewmB439
MELO3C004499	Cucurbita pepo (Zucchini)	cpemeB099
MELO3C004499	Cucurbita pepo (Zucchini)	cpemeB343
MELO3C004499	Cucurbita pepo (Zucchini)	cpemeB633
MELO3C004499	Cucurbita pepo (Zucchini)	cpemeB778
MELO3C004499	Bottle gourd (USVL1VR-Ls)	lsimeB116
MELO3C004499	Bottle gourd (USVL1VR-Ls)	lsimeB219
MELO3C004499	Bottle gourd (USVL1VR-Ls)	lsimeB313
MELO3C004499	Bottle gourd (USVL1VR-Ls)	lsimeB418
MELO3C004499	Bottle gourd (USVL1VR-Ls)	lsimeB442
MELO3C004499	Cucumber (Gy14) v2	cgybmeB066
MELO3C004499	Cucumber (Gy14) v2	cgybmeB121
MELO3C004499	Cucumber (Gy14) v2	cgybmeB492
MELO3C004499	Silver-seed gourd	carmeB0039
MELO3C004499	Silver-seed gourd	carmeB0209
MELO3C004499	Silver-seed gourd	carmeB0258
MELO3C004499	Silver-seed gourd	carmeB0577
MELO3C004499	Cucumber (Chinese Long) v3	cucmeB079
MELO3C004499	Cucumber (Chinese Long) v3	cucmeB142
MELO3C004499	Cucumber (Chinese Long) v3	cucmeB146
MELO3C004499	Cucumber (Chinese Long) v3	cucmeB575
MELO3C004499	Watermelon (97103) v2	mewmbB383
MELO3C004499	Watermelon (97103) v2	mewmbB373
MELO3C004499	Watermelon (97103) v2	mewmbB398
MELO3C004499	Watermelon (97103) v2	mewmbB404
MELO3C004499	Watermelon (97103) v2	mewmbB415
MELO3C004499	Wax gourd	mewgoB461
MELO3C004499	Wax gourd	mewgoB488
MELO3C004499	Wax gourd	mewgoB489
MELO3C004499	Wax gourd	mewgoB491
MELO3C004499	Melon (DHL92) v3.5.1	memeB088
MELO3C004499	Melon (DHL92) v3.5.1	memeB104
MELO3C004499	Melon (DHL92) v3.5.1	memeB124
MELO3C004499	Cucumber (Gy14) v1	cgymeB216
MELO3C004499	Cucurbita maxima (Rimu)	cmameB074
MELO3C004499	Cucurbita maxima (Rimu)	cmameB129
MELO3C004499	Cucurbita maxima (Rimu)	cmameB172
MELO3C004499	Cucurbita maxima (Rimu)	cmameB735