MELO3C004328 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C004328
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description5-methylthioadenosine/S-adenosylhomocysteine deaminase
Locationchr5 : 25544945 .. 25545679 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGATAAGAAAAAGGGTAAGCAAATTTGTTGTGTTGACTCTCCCCCAAAGTTGAACTCTATCAACACAAAGAGGAAAGTTTCCTTTAGCTCCCCAAAGAACGAAACCTTTCACTACTCTGCCCAAGCTGCTCCCATAAAGGCTCTAAAAATAGGAAGTCCAATGGGTTATGCAAAAATATGTAGGGAAGCAAAAACCAAAAGGACAGAATTGCTCAAAAAGAAAAAAGTTTATAGAGTCAAGAGCCAAGACACCGAAGGAGAAACTTCTCAGACAAATAGACAAAATGAAAAAGGCAGAGATGACCTAAATGAGCTTAATCTGGTTATGGACCTTGGCCATATTTCTCCTCTTTCAGACATGGATTTCTCCAGCCCTGAAAGATCCTCGTACACCCCTTCACCAACAACTCCTACCGAGTCAAATATTGTGAAAGACAGTCTGGCAAATATGATCACGAGTGATCATGAAGAAAAAGGAAGGCAGAAAAGGGAGATAAAAGGAGATGAGACTGACGATGATGAATCAAGCTTCAAGAGGAAATTAACAAAATGGTTGAAAGAAAATAACCTTAGGCTTTCTGCTGTCTTTAATTCTCATTTTAACTCTACTTGTGATGATAGGGTGGAATCTGTTCCAAATGGGCCACAAAATTTAGATGTTGAAAATTTGACTGATGATGTAATAGATGGAAAGGAAAAAGACACTATGGGGTTGAATGTGTATCCATGA

mRNA sequence

ATGACTGATAAGAAAAAGGGTAAGCAAATTTGTTGTGTTGACTCTCCCCCAAAGTTGAACTCTATCAACACAAAGAGGAAAGTTTCCTTTAGCTCCCCAAAGAACGAAACCTTTCACTACTCTGCCCAAGCTGCTCCCATAAAGGCTCTAAAAATAGGAAGTCCAATGGGTTATGCAAAAATATGTAGGGAAGCAAAAACCAAAAGGACAGAATTGCTCAAAAAGAAAAAAGTTTATAGAGTCAAGAGCCAAGACACCGAAGGAGAAACTTCTCAGACAAATAGACAAAATGAAAAAGGCAGAGATGACCTAAATGAGCTTAATCTGGTTATGGACCTTGGCCATATTTCTCCTCTTTCAGACATGGATTTCTCCAGCCCTGAAAGATCCTCGTACACCCCTTCACCAACAACTCCTACCGAGTCAAATATTGTGAAAGACAGTCTGGCAAATATGATCACGAGTGATCATGAAGAAAAAGGAAGGCAGAAAAGGGAGATAAAAGGAGATGAGACTGACGATGATGAATCAAGCTTCAAGAGGAAATTAACAAAATGGTTGAAAGAAAATAACCTTAGGCTTTCTGCTGTCTTTAATTCTCATTTTAACTCTACTTGTGATGATAGGGTGGAATCTGTTCCAAATGGGCCACAAAATTTAGATGTTGAAAATTTGACTGATGATGTAATAGATGGAAAGGAAAAAGACACTATGGGGTTGAATGTGTATCCATGA

Coding sequence (CDS)

ATGACTGATAAGAAAAAGGGTAAGCAAATTTGTTGTGTTGACTCTCCCCCAAAGTTGAACTCTATCAACACAAAGAGGAAAGTTTCCTTTAGCTCCCCAAAGAACGAAACCTTTCACTACTCTGCCCAAGCTGCTCCCATAAAGGCTCTAAAAATAGGAAGTCCAATGGGTTATGCAAAAATATGTAGGGAAGCAAAAACCAAAAGGACAGAATTGCTCAAAAAGAAAAAAGTTTATAGAGTCAAGAGCCAAGACACCGAAGGAGAAACTTCTCAGACAAATAGACAAAATGAAAAAGGCAGAGATGACCTAAATGAGCTTAATCTGGTTATGGACCTTGGCCATATTTCTCCTCTTTCAGACATGGATTTCTCCAGCCCTGAAAGATCCTCGTACACCCCTTCACCAACAACTCCTACCGAGTCAAATATTGTGAAAGACAGTCTGGCAAATATGATCACGAGTGATCATGAAGAAAAAGGAAGGCAGAAAAGGGAGATAAAAGGAGATGAGACTGACGATGATGAATCAAGCTTCAAGAGGAAATTAACAAAATGGTTGAAAGAAAATAACCTTAGGCTTTCTGCTGTCTTTAATTCTCATTTTAACTCTACTTGTGATGATAGGGTGGAATCTGTTCCAAATGGGCCACAAAATTTAGATGTTGAAAATTTGACTGATGATGTAATAGATGGAAAGGAAAAAGACACTATGGGGTTGAATGTGTATCCATGA

Protein sequence

MTDKKKGKQICCVDSPPKLNSINTKRKVSFSSPKNETFHYSAQAAPIKALKIGSPMGYAKICREAKTKRTELLKKKKVYRVKSQDTEGETSQTNRQNEKGRDDLNELNLVMDLGHISPLSDMDFSSPERSSYTPSPTTPTESNIVKDSLANMITSDHEEKGRQKREIKGDETDDDESSFKRKLTKWLKENNLRLSAVFNSHFNSTCDDRVESVPNGPQNLDVENLTDDVIDGKEKDTMGLNVYP*
Homology
[Close]
BLAST of MELO3C004328 vs. TrEMBL
Match: A0A0A0KDP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367100 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 43/124 (34.68%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 68  KRTELLKKKKVYRVKSQDTEGETSQT-NRQNEK-------GRDDLNELNLVMDLGHISPL 127
           ++ E+ K+K++Y V+S   +   ++  N +N K        ++++ +L LV+DLG +SPL
Sbjct: 11  RQNEMEKRKQIYIVRSPVKQAHLAKAKNERNTKLKIQPKEDKEEMADLKLVVDLGPLSPL 70

Query: 128 SDMDFSSPERSSYTPSPTTPTESNIVKDSLANMITSDHEEKGRQKREIKGDETDDDESSF 184
           SD   SS +  + + SPT+PT+  IVK ++A M+ SD EEK +  +E       ++E++F
Sbjct: 71  SDEFLSSSDLFTPSLSPTSPTQPYIVKGNIAPMMISDQEEKEKSDKE-------EEETTF 127

[Close]
BLAST of MELO3C004328 vs. NCBI nr
Match: gi|700192459|gb|KGN47663.1| (hypothetical protein Csa_6G367100 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 43/124 (34.68%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 68  KRTELLKKKKVYRVKSQDTEGETSQT-NRQNEK-------GRDDLNELNLVMDLGHISPL 127
           ++ E+ K+K++Y V+S   +   ++  N +N K        ++++ +L LV+DLG +SPL
Sbjct: 11  RQNEMEKRKQIYIVRSPVKQAHLAKAKNERNTKLKIQPKEDKEEMADLKLVVDLGPLSPL 70

Query: 128 SDMDFSSPERSSYTPSPTTPTESNIVKDSLANMITSDHEEKGRQKREIKGDETDDDESSF 184
           SD   SS +  + + SPT+PT+  IVK ++A M+ SD EEK +  +E       ++E++F
Sbjct: 71  SDEFLSSSDLFTPSLSPTSPTQPYIVKGNIAPMMISDQEEKEKSDKE-------EEETTF 127

The following BLAST results are available for this feature:
BLAST of MELO3C004328 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDP8_CUCSA1.5e-0934.68Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367100 PE=4 SV=1[more]
BLAST of MELO3C004328 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192459|gb|KGN47663.1|2.1e-0934.68hypothetical protein Csa_6G367100 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004328T1MELO3C004328T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004328Watermelon (97103) v2mewmbB376
MELO3C004328Wax gourdmewgoB454
MELO3C004328Cucumber (Gy14) v1cgymeB216
MELO3C004328Cucurbita maxima (Rimu)cmameB172
MELO3C004328Cucurbita maxima (Rimu)cmameB735
MELO3C004328Cucurbita moschata (Rifu)cmomeB161
MELO3C004328Cucurbita moschata (Rifu)cmomeB724
MELO3C004328Wild cucumber (PI 183967)cpimeB139
MELO3C004328Cucumber (Chinese Long) v2cumeB139
MELO3C004328Watermelon (Charleston Gray)mewcgB375
MELO3C004328Watermelon (97103) v1mewmB418
MELO3C004328Cucurbita pepo (Zucchini)cpemeB099
MELO3C004328Cucurbita pepo (Zucchini)cpemeB771
MELO3C004328Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C004328Cucumber (Gy14) v2cgybmeB120
MELO3C004328Silver-seed gourdcarmeB0298
MELO3C004328Silver-seed gourdcarmeB0711
MELO3C004328Cucumber (Chinese Long) v3cucmeB141