MELO3C004243 (gene) Melon (DHL92) v3.5.1

NameMELO3C004243
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUPF0291 protein SpyM50407
Locationchr5 : 24541413 .. 24541907 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG

mRNA sequence

ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG

Coding sequence (CDS)

ATGTCTGCCTTCGTACAGATTGGGGAAGCATGTGGTGGGTTTATTGAAGCAGCTCCGGAAACAGTAGACAAAGCAGAGCTGACTGAAGCTTTGATTAAGGTGAAGGATAACTACACGATGTTCTTACCAGCATTTATCAAAATCTATGATGAAGAAGGAAGTGATTTCACTATCCATACAATAACACATCCAGAAGGAAGATGGCTGAGAGAAAGAAATCCCGGAATCCATGGTTCCTTTACTAGAAATGCTGCTGAAATATTCAACGAATACAATCCATATGCTGAACAGTATACCTTTGATAGGAATCTCGCTGTTATAAGCCAAAAAGACTCGTCGGAAACATCAAAAAGCAGAAACAACAAGATGAACACTCGTCGGAAAACTGGACCCACAAAAATGAATAAAAAATTCAACAAAGCTGTTAGTTTTTTGAATTTGAATTATGAGGGTGACAGCGACAACAGTAACCTATCAGAAAAAGTGAAGAAATAG

Protein sequence

MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHTITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRNNKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNSNLSEKVKK*
BLAST of MELO3C004243 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-29
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 1

Query: 1   MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
           + +FVQIG+ACGGF+E A ET +  +L EA I+VKDNY+ F+PAFIK+ D+E   + I  
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQV 289

Query: 61  ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
           I   EG+W   RNP IHG+FTR AA  F+E+N  +EQY F+ NLA+  +K  S      +
Sbjct: 290 IVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAISPEKAVSMVIGKED 349

Query: 121 NKMNTRRKTGP-TKMNKKFNKAVSFLNLNYEGDSDNS 157
            K   ++  GP  + NKK    + F  LNY+GDSD+S
Sbjct: 350 WK---KKGNGPLLENNKKLGAMMDF--LNYDGDSDSS 381

BLAST of MELO3C004243 vs. TrEMBL
Match: A0A0A0KFP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1

Query: 1   MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
           M  F QIGEACG FIE   E   + E+ +A++KVK+N+T F+PAFI ++D++G+ F + +
Sbjct: 84  METFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFINVFDKKGNSFLVQS 143

Query: 61  ITHPEGR 68
           I   EG+
Sbjct: 144 IVQAEGK 150

BLAST of MELO3C004243 vs. TrEMBL
Match: A0A0A0LH82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.4e-09
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1

Query: 36  DNYTMFLPAFIKIYDEEGSDFTIHTITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYA 95
           D  + F+PA+I+I D+ G+ F I  ++H +G+WL ERN   HG F   A   F E+NP A
Sbjct: 3   DIKSRFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNA 62

Query: 96  EQYTFDRNLAVISQKDSSETSKSRNNKMNTRRKTGPTKMNKKF 139
           +Q+TF  +  +  +  +S    S+N  +N   K G   +N KF
Sbjct: 63  KQFTFIGSEGLPPKHPTS----SKNKVLNDEIKNG---LNAKF 98

BLAST of MELO3C004243 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-29
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 1

Query: 1   MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
           + +FVQIG+ACGGF+E A ET +  +L EA I+VKDNY+ F+PAFIK+ D+E   + I  
Sbjct: 230 LESFVQIGDACGGFMEVAKETRELTDLIEASIRVKDNYSGFIPAFIKLIDKEERSYIIQV 289

Query: 61  ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
           I   EG+W   RNP IHG+FTR AA  F+E+N  +EQY F+ NLA+  +K  S      +
Sbjct: 290 IVKTEGKWHLGRNPSIHGTFTREAARRFDEFNLNSEQYFFEGNLAISPEKAVSMVIGKED 349

Query: 121 NKMNTRRKTGP-TKMNKKFNKAVSFLNLNYEGDSDNS 157
            K   ++  GP  + NKK    + F  LNY+GDSD+S
Sbjct: 350 WK---KKGNGPLLENNKKLGAMMDF--LNYDGDSDSS 381

BLAST of MELO3C004243 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 1

Query: 1   MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
           M  F QIG+ACGG I+ A ET     L EA IK++ NY+ FLPA ++I+D EG+ F+I  
Sbjct: 303 MKTFQQIGKACGGLIKVAEETRSAKNLIEAKIKIRYNYSGFLPANVRIFDNEGNKFSIQV 362

Query: 61  ITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYAEQYTFDRNLAVISQKDSSETSKSRN 120
           +THPEG+WL ERN  +HG+F R AA  F+E+NP +EQ+ F+  +  IS    + +S  R 
Sbjct: 363 VTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPESEQFFFE-GMEAISPDFLATSSDGRK 422

Query: 121 NKMNTRRKTGPTKMNKKFNKAVSFLNLNYEGDSDNS 157
           +    +     + + K    A S   LN E  +D++
Sbjct: 423 SSTPDQPSALKSVIIKPDKIATSPSLLNEEAVNDSN 457

BLAST of MELO3C004243 vs. NCBI nr
Match: gi|700192460|gb|KGN47664.1| (hypothetical protein Csa_6G367105 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1

Query: 1   MSAFVQIGEACGGFIEAAPETVDKAELTEALIKVKDNYTMFLPAFIKIYDEEGSDFTIHT 60
           M  F QIGEACG FIE   E   + E+ +A++KVK+N+T F+PAFI ++D++G+ F + +
Sbjct: 84  METFTQIGEACGSFIEITREIKKQVEIRQAMLKVKENFTGFIPAFINVFDKKGNSFLVQS 143

Query: 61  ITHPEGR 68
           I   EG+
Sbjct: 144 IVQAEGK 150

BLAST of MELO3C004243 vs. NCBI nr
Match: gi|700205999|gb|KGN61118.1| (hypothetical protein Csa_2G055060 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1

Query: 36  DNYTMFLPAFIKIYDEEGSDFTIHTITHPEGRWLRERNPGIHGSFTRNAAEIFNEYNPYA 95
           D  + F+PA+I+I D+ G+ F I  ++H +G+WL ERN   HG F   A   F E+NP A
Sbjct: 3   DIKSRFVPAYIRITDDLGNSFPIQIVSHTQGKWLVERNVRKHGIFKSQATTSFGEFNPNA 62

Query: 96  EQYTFDRNLAVISQKDSSETSKSRNNKMNTRRKTGPTKMNKKF 139
           +Q+TF  +  +  +  +S    S+N  +N   K G   +N KF
Sbjct: 63  KQFTFIGSEGLPPKHPTS----SKNKVLNDEIKNG---LNAKF 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GB30_CUCME1.9e-2947.13Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KFP0_CUCSA1.2e-1046.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G367105 PE=4 SV=1[more]
A0A0A0LH82_CUCSA8.4e-0936.89Uncharacterized protein OS=Cucumis sativus GN=Csa_2G055060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307135793|gb|ADN33672.1|2.8e-2947.13hypothetical protein [Cucumis melo subsp. melo][more]
gi|659071590|ref|XP_008460776.1|1.3e-2341.03PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|700192460|gb|KGN47664.1|1.7e-1046.27hypothetical protein Csa_6G367105 [Cucumis sativus][more]
gi|700205999|gb|KGN61118.1|1.2e-0836.89hypothetical protein Csa_2G055060 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004243T1MELO3C004243T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None