MELO3C004088.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004088.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Transmembrane protein, putative
Location	chr05 : 23831764 .. 23833017 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCAACATATCCAAGAAAGGAGGCTTGGCTGTCTTTCTTTGCAAAACTGACTTTTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTGTGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTATAAGAAAGATAAAAAGCAAAGAACATTACGAAGGAGTTATTAGTGGGTACGAGGCATGGCAGGAAAACAGAAGGAAGAATATAATAGATATCTTAAGGGAGGTAGTTGAAAGAGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTTTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAACGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACTTTAGATAAGGAGATAAGGCGAGTGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGACAACATTACAAGCAACAGTGGGGTCGCAAGACGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTGAAAAACGAGAAATACAAATAATGGATTTGGAACCAGAAAATCATTCTTTGCGTCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGCCGATTTCTTACACTATCCACTTACTGCATTTCAAAATTCAAGTAAGAGGATAACACAAGAATATGAGTCATTGAATACAGATTACGTGCAAATGAAGGTTGATTATGATCTGCAAACGAGATATTTCCAAGTGCTAGTGGAACGTGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCATAATGGGCAGCTGATTTGAGAGTTAAATTTTTTTTCTCAATGCAACCTCATGCAGATGATCTAAATAGATTCTTGAAGATGATATGCAGAGAACTGGGACATTATTGGCGTTTTCATTAATTGTTCATTTTGTTATTGA

mRNA sequence

ATCCAACATATCCAAGAAAGGAGGCTTGGCTGTCTTTCTTTGCAAAACTGACTTTTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTGTGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTATAAGAAAGATAAAAAGCAAAGAACATTACGAAGGAGTTATTAGTGGGTACGAGGCATGGCAGGAAAACAGAAGGAAGAATATAATAGATATCTTAAGGGAGGTAGTTGAAAGAGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTTTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAACGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACTTTAGATAAGGAGATAAGGCGAGTGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGACAACATTACAAGCAACAGTGGGGTCGCAAGACGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTGAAAAACGAGAAATACAAATAATGGATTTGGAACCAGAAAATCATTCTTTGCGTCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGCCGATTTCTTACACTATCCACTTACTGCATTTCAAAATTCAAGTAAGAGGATAACACAAGAATATGAGTCATTGAATACAGATTACGTGCAAATGAAGGTTGATTATGATCTGCAAACGAGATATTTCCAAGTGCTAGTGGAACGTGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCATAATGGGCAGCTGATTTGAGAGTTAAATTTTTTTTCTCAATGCAACCTCATGCAGATGATCTAAATAGATTCTTGAAGATGATATGCAGAGAACTGGGACATTATTGGCGTTTTCATTAATTGTTCATTTTGTTATTGA

Coding sequence (CDS)

ATGCCTTTAAAGGCGGTGATATATAGATGCAGAGATTTTCACAGTGTGCCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGTTTTGCGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTGCAAGAGTCTGATTTTTCATACGATCCTGAAGATTGTCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTATAAGAAAGATAAAAAGCAAAGAACATTACGAAGGAGTTATTAGTGGGTACGAGGCATGGCAGGAAAACAGAAGGAAGAATATAATAGATATCTTAAGGGAGGTAGTTGAAAGAGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTTTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACAAGTCAATGGATGGATCATGCGACTTATTTGCAGAACGAACTCGAAAAGACTAAGAGTTTCTTAAAAAATCAAGATAAGTTAGAAAAGAATCTTGAGACTTTAGATAAGGAGATAAGGCGAGTGAATAAAGCAAATAGGAGCTTGAAAAATGAGAAGACAACATTACAAGCAACAGTGGGGTCGCAAGACGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCGAGCTTGTCAATGATTTGAATACATCAATTGAAAAACGAGAAATACAAATAATGGATTTGGAACCAGAAAATCATTCTTTGCGTCAAACTGTTGATAGCCTACATCTGAAGATGGCCGAGCGCTCTGAAGAGTATGAGATACTGAAAAATTATGCCGATTTCTTACACTATCCACTTACTGCATTTCAAAATTCAAGTAAGAGGATAACACAAGAATATGAGTCATTGAATACAGATTACGTGCAAATGAAGGTTGATTATGATCTGCAAACGAGATATTTCCAAGTGCTAGTGGAACGTGTAGATCAGACAATCGAATTTCTCAGAATGGTGTCCAAAAGAGCAAATGGTTTTGCATAA

Protein sequence

MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNIIDILREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKNLETLDKEIRRVNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLNTSIEKREIQIMDLEPENHSLRQTVDSLHLKMAERSEEYEILKNYADFLHYPLTAFQNSSKRITQEYESLNTDYVQMKVDYDLQTRYFQVLVERVDQTIEFLRMVSKRANGFA

Homology

[Close]

BLAST of MELO3C004088.2 vs. NCBI nr
Match: XP_016900531.1 (PREDICTED: girdin-like [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 2.3e-82
Identity = 249/344 (72.38%), Postives = 253/344 (73.55%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHSVPLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 1   MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 60

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNIIDILREVVERGKETSFEQP 120
           QGKKRQAVCAWKSIRKIK K HYEGV SGYEAWQ NRRKNIIDI REVVERGKETSFEQP
Sbjct: 61  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 120

Query: 121 NQWIEKSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           NQWI+KSI    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 NQWIKKSIELEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXTTLQATVGSQDEYIKDLESGKEYFLELVNDLNTSIEKREI 240
           XXXXXXXXXXXXXXXXXXXX    ATVGS+DEYIKDLESGKEYFLE VND          
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXATVGSEDEYIKDLESGKEYFLEFVNDXXXXXXXXXX 240

Query: 241 QIMDLEPENHSLRQTVDSLHLKMAERSEEYEILKNYADFLHYPLTAFQNSSKRITQEYES 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 LNTDYVQMKVDYDLQTRYFQVLVERVDQTIEFLRMVSKRANGFA 345
             TDYVQMKVDYDLQTR FQVLVER+DQTI+FLRMVSKRAN FA
Sbjct: 301 XXTDYVQMKVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFA 344

[Close]

BLAST of MELO3C004088.2 vs. NCBI nr
Match: XP_022147190.1 (uncharacterized protein LOC111016201 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 4.8e-24
Identity = 49/102 (48.04%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           M  K ++YRC  FHS+ LLGPWG V+Y PL+VLRQ+W++QFIP TH+L+ S+F+YD   C
Sbjct: 325 MSTKPMMYRCGKFHSLSLLGPWGCVSYAPLMVLRQIWVRQFIPATHDLRNSEFAYDIGFC 384

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNII 103
           + K ++ V AWK+I +I+S  +++ +  GYE W  +R K ++
Sbjct: 385 KNKIQEVVKAWKTIVRIQSGNYHDNIFEGYEKWHSSRGKTVV 426

[Close]

BLAST of MELO3C004088.2 vs. NCBI nr
Match: XP_022150759.1 (uncharacterized protein LOC111018820 [Momordica charantia])

HSP 1 Score: 120.9 bits (302), Expect = 8.3e-24
Identity = 49/102 (48.04%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           M  K ++YRC  FHS+PLLGP G V+Y PL+VLRQ+W++QFIP TH+L+ S+F+YD   C
Sbjct: 217 MSTKPMMYRCGKFHSLPLLGPCGCVSYAPLMVLRQIWVRQFIPATHDLRNSEFAYDVRFC 276

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNII 103
           + K ++ V AWK+I +I+S  +++ +  GYE W  +R K ++
Sbjct: 277 KNKIQEVVKAWKAIVRIQSGNYHDNIFEGYEQWHSSRGKTVV 318

[Close]

BLAST of MELO3C004088.2 vs. NCBI nr
Match: KGN51408.1 (hypothetical protein Csa_5G528450 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           +P   + YRC     + LLG WGG+ Y+PLLVL Q W KQF    + L++ DFSY+ ++ 
Sbjct: 11  VPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEM 70

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENR 98
             K ++ +  WK +R++KS  H +G  + Y+ W+ +R
Sbjct: 71  IVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADR 107

[Close]

BLAST of MELO3C004088.2 vs. NCBI nr
Match: EOX94247.1 (Uncharacterized protein TCM_003795 [Theobroma cacao])

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-13
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MP   V+Y+C D   VPL+GPWG ++Y P++V RQ   +QF+P TH L + +F+Y   + 
Sbjct: 240 MPRMQVMYKCGDKPWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHQLDQLEFTYGEPET 299

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNII 103
             K  +    WK   ++      + V +GY  W + R KN+I
Sbjct: 300 LKKIEEIAQDWKKTYRVDQGRVTDEVTTGYHTWHDQRVKNVI 341

[Close]

BLAST of MELO3C004088.2 vs. TrEMBL
Match: tr|A0A1S4DX26|A0A1S4DX26_CUCME (girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 249/344 (72.38%), Postives = 253/344 (73.55%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MPLKAVIYRC DFHSVPLLGPWGGVNY PLLVLRQVWLKQFIPPTHNLQESDFSYD EDC
Sbjct: 1   MPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLRQVWLKQFIPPTHNLQESDFSYDLEDC 60

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNIIDILREVVERGKETSFEQP 120
           QGKKRQAVCAWKSIRKIK K HYEGV SGYEAWQ NRRKNIIDI REVVERGKETSFEQP
Sbjct: 61  QGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQP 120

Query: 121 NQWIEKSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           NQWI+KSI    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 NQWIKKSIELEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXTTLQATVGSQDEYIKDLESGKEYFLELVNDLNTSIEKREI 240
           XXXXXXXXXXXXXXXXXXXX    ATVGS+DEYIKDLESGKEYFLE VND          
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXATVGSEDEYIKDLESGKEYFLEFVNDXXXXXXXXXX 240

Query: 241 QIMDLEPENHSLRQTVDSLHLKMAERSEEYEILKNYADFLHYPLTAFQNSSKRITQEYES 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 LNTDYVQMKVDYDLQTRYFQVLVERVDQTIEFLRMVSKRANGFA 345
             TDYVQMKVDYDLQTR FQVLVER+DQTI+FLRMVSKRAN FA
Sbjct: 301 XXTDYVQMKVDYDLQTRDFQVLVERIDQTIKFLRMVSKRANVFA 344

[Close]

BLAST of MELO3C004088.2 vs. TrEMBL
Match: tr|A0A0A0KP72|A0A0A0KP72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528450 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           +P   + YRC     + LLG WGG+ Y+PLLVL Q W KQF    + L++ DFSY+ ++ 
Sbjct: 11  VPKSPLTYRCGQLLFISLLGLWGGIAYSPLLVLHQTWSKQFASVIYGLEDWDFSYEADEM 70

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENR 98
             K ++ +  WK +R++KS  H +G  + Y+ W+ +R
Sbjct: 71  IVKVQEVIETWKVVRRLKSLRHCKGTTNQYDIWRADR 107

[Close]

BLAST of MELO3C004088.2 vs. TrEMBL
Match: tr|A0A061G4J9|A0A061G4J9_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_016087 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.7e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MP   V+Y+C D   VPL+GPWG ++Y P++V RQ   +QF+P TH L + +F+Y   + 
Sbjct: 265 MPRMQVMYKCGDKSWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHQLDQLEFTYGEPET 324

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNII 103
             K  +    WK   ++      + V +GY  W + R KN+I
Sbjct: 325 LKKIEEIAQDWKKTCRVDQGRVTDEVTTGYHTWHDQRVKNVI 366

[Close]

BLAST of MELO3C004088.2 vs. TrEMBL
Match: tr|A0A061DPB5|A0A061DPB5_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003795 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.7e-14
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 60
           MP   V+Y+C D   VPL+GPWG ++Y P++V RQ   +QF+P TH L + +F+Y   + 
Sbjct: 240 MPRMQVMYKCGDKPWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHQLDQLEFTYGEPET 299

Query: 61  QGKKRQAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNII 103
             K  +    WK   ++      + V +GY  W + R KN+I
Sbjct: 300 LKKIEEIAQDWKKTYRVDQGRVTDEVTTGYHTWHDQRVKNVI 341

[Close]

BLAST of MELO3C004088.2 vs. TrEMBL
Match: tr|A0A1U8K1F0|A0A1U8K1F0_GOSHI (uncharacterized protein LOC107910990 OS=Gossypium hirsutum OX=3635 GN=LOC107910990 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.8e-14
Identity = 44/102 (43.14%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 6   VIYRCRDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKR 65
           ++YRC DF  VPLLG WG V Y PLLVLRQ   +QF+P T  L E +FSY   +  GK R
Sbjct: 322 ILYRCGDFDWVPLLGIWGAVGYAPLLVLRQYKSRQFVPVTQGLAECEFSYKGNNYMGKIR 381

Query: 66  QAVCAWKSIRKIKSKEHYEGVISGYEAWQENRRKNIIDILRE 108
           +   AWK I ++K           Y  W+  R  + I   RE
Sbjct: 382 EMYSAWKQIHQMKRIAVGATTTPEYHGWRSKRINDNIPKPRE 423

The following BLAST results are available for this feature:

BLAST of MELO3C004088.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900531.1	2.3e-82	72.38	PREDICTED: girdin-like [Cucumis melo]	[more]
XP_022147190.1	4.8e-24	48.04	uncharacterized protein LOC111016201 [Momordica charantia]	[more]
XP_022150759.1	8.3e-24	48.04	uncharacterized protein LOC111018820 [Momordica charantia]	[more]
KGN51408.1	2.0e-14	38.14	hypothetical protein Csa_5G528450 [Cucumis sativus]	[more]
EOX94247.1	1.0e-13	36.27	Uncharacterized protein TCM_003795 [Theobroma cacao]	[more]

BLAST of MELO3C004088.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C004088.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C004088.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DX26\|A0A1S4DX26_CUCME	1.5e-82	72.38	girdin-like OS=Cucumis melo OX=3656 GN=LOC107990936 PE=4 SV=1	[more]
tr\|A0A0A0KP72\|A0A0A0KP72_CUCSA	1.4e-14	38.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528450 PE=4 SV=1	[more]
tr\|A0A061G4J9\|A0A061G4J9_THECC	6.7e-14	36.27	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_016087 PE=4 SV=1	[more]
tr\|A0A061DPB5\|A0A061DPB5_THECC	6.7e-14	36.27	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_003795 PE=4 SV=1	[more]
tr\|A0A1U8K1F0\|A0A1U8K1F0_GOSHI	8.8e-14	43.14	uncharacterized protein LOC107910990 OS=Gossypium hirsutum OX=3635 GN=LOC1079109...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004088.2.1	MELO3C004088.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..154
None	No IPR available	COILS	Coil	Coil	coord: 165..206

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004088.2	Silver-seed gourd	carmedB0062
MELO3C004088.2	Cucumber (Chinese Long) v3	cucmedB075
MELO3C004088.2	Cucumber (Chinese Long) v3	cucmedB134
MELO3C004088.2	Watermelon (97103) v2	medwmbB360
MELO3C004088.2	Watermelon (97103) v2	medwmbB389
MELO3C004088.2	Wax gourd	medwgoB456
MELO3C004088.2	Wax gourd	medwgoB494
MELO3C004088.2	Cucumber (Gy14) v2	cgybmedB064
MELO3C004088.2	Cucumber (Gy14) v2	cgybmedB118
MELO3C004088.2	Cucumber (Gy14) v1	cgymedB104
MELO3C004088.2	Cucurbita maxima (Rimu)	cmamedB081
MELO3C004088.2	Cucurbita maxima (Rimu)	cmamedB142
MELO3C004088.2	Cucurbita maxima (Rimu)	cmamedB192
MELO3C004088.2	Cucurbita maxima (Rimu)	cmamedB831
MELO3C004088.2	Cucurbita moschata (Rifu)	cmomedB075
MELO3C004088.2	Cucurbita moschata (Rifu)	cmomedB132
MELO3C004088.2	Cucurbita moschata (Rifu)	cmomedB183
MELO3C004088.2	Cucurbita moschata (Rifu)	cmomedB822
MELO3C004088.2	Cucurbita pepo (Zucchini)	cpemedB129
MELO3C004088.2	Cucurbita pepo (Zucchini)	cpemedB403
MELO3C004088.2	Cucurbita pepo (Zucchini)	cpemedB760
MELO3C004088.2	Cucurbita pepo (Zucchini)	cpemedB915
MELO3C004088.2	Wild cucumber (PI 183967)	cpimedB067
MELO3C004088.2	Wild cucumber (PI 183967)	cpimedB132
MELO3C004088.2	Cucumber (Chinese Long) v2	cumedB070
MELO3C004088.2	Cucumber (Chinese Long) v2	cumedB132
MELO3C004088.2	Bottle gourd (USVL1VR-Ls)	lsimedB123
MELO3C004088.2	Watermelon (Charleston Gray)	medwcgB362
MELO3C004088.2	Watermelon (Charleston Gray)	medwcgB388
MELO3C004088.2	Watermelon (97103) v1	medwmB427
MELO3C004088.2	Watermelon (97103) v1	medwmB411