MELO3C003920 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003920
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description50S ribosomal protein L7/L12, putative
Locationchr5 : 19591070 .. 19596260 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCAAGTCTTTTGTCGCCGCCACGCCAGCCACCTCGCCCCCTGACGCGGGCTCCTTTCCTCTCGCCAGCATTTCTCTCTTTCTCTCCTCTCCCACACGCCGACGACTAATCGGCTGAACGCCGTCCAGCCAAACGCACCGCCGCCAGCTCTCGCCGCGCAGGATCGAAGTTGCTAGCCGATCTGTGTTGTACTTTGTCCCTTCTCCGATCAGCCACTGTCTTCCGATTGGAAGTCGTTCACTAACTCCTGGCCGTCGGATTTTGTTTGTCGTGCACGCTGCCGCTTGGCCCACAGTCACGCTACCCAGAGATTCGTTTCGCGCTGCTACGGAATTCAAAGTCGTAGCGCCCAAATCTTGCTACTCGGACCCGAGTCCTGTGTAGGGCTAGTTGTCCTTTCTGTTCGTGTGTCGACAGAGCCTCCTATCTGCTCGCAAGCTTCGAATCTCCGCTGTATTTCCAGTAGGTTGTCGCTGAAAGTTTTATTCGTGAGCTTTGGGGTAAAATTTAATTGTTTTAGTTGGGATTCTTGTAAAATTTGGAGCACCCATTAAATTTTAAATTAAATTTTTATCATGTTTAGGTATTAAAATTGAGTTCTTGGAAGGACTTAGCTACTGTCTAGCCGAGGAGTGAATTTTTGCATGTTCTGGCACACTCTAGGTAAGATTCTAAGCTTTTTGAGTGGGTCTTGAATACCCTTCTAAGTTCAGTGCTAATATTGAATAAGCTATCATTTTTGGATACTTATAATGAGTTTTCTTGGAATTTTGAATACCCATTTAGTTTTAGTATGAACTTTATGTTACCCATATTGTTTTGTATGAGAGATTAAAGATTTGAAGAACTTGGAAGCATTGATCAACATGTTTAAGGTCGTTTTAGACAAGTTTGGGTAAGTTCTTAAGGTATGGATATAAGAGCTAATGGATCTAAATCTCTAAGGTATGAATATTGGATATAAGAGCGTATGGAATTAAAAGATCCATTAAGATGACTTAAGTTTGGGTGCTTATGGTGTTAAGAGTTGAAGTTGAAGTTTAAGGGTCCAAAAGTGAAATTTTAGCCTATTCACTTAGGGAATAGTTCAATCTAGATCTTAGGAAGTGGTTAAGGTTGTTGGTCTCTTGTTGATATAATGGATATTAGGGGTGAAAAAAACCGAACTGAACCAACGCGGTTCGGTTCAGATTGGGCTGGTTTATAACAAGAATATTACCTACCGAACCAAACTGAACCAGTTCAGTTCGGTTCAGTTGGTGGTTAACCGTTAGGTTAAAATTAAAATTAACTCCGTCCTTATCGTGGGTCCTTCGTTCTTCGTCCTTCCTTCTCCTTCTCTGTCTCTATTTCTGCCAGCTCCACTGCCGTTTTGGGTTTAGGTTCTTCTCCGTTTTTCCATTTGCCATTCTCCGTCCTTCGTTGTTCTTTTGGGTTCATTGTTCTCCACCAATGCCGATTTAGAACTAGTGTTAGGTATCATAAAGTAACATAATGTATTTGTTCTTTGAGCAATGAGTAAAGTAAAGTAAATTTCACTATTCTCCGATCTCTTTGCTTTTGCTACCCTTTTTCTGAATTAGTTCTTTGATATTTATATACCAGGCACCCAACTATCTACCCTCTGCTATGGCCGTGCTTTGTACTGCTCCATTTCTAGACCCACTTGCCTGAATCATGGTTTTTGTTGTCTGTGGGTTTTTGGGGTTGTGACGTGAGTGTGATTTTTCCCCCATATGCGAGATAGAGCTTGTGATATGTGGAAGAAAATGTTAGGTGAGTGTTTTAATATAATTATTTTCCATAGATCTCCTTGTTAGTTTTAGAATTTTGGAGTGGAGTGTTCAAAACTACAAATTAAAAGGGCTTTGACAACAGTAACAAAATCATGTCAGCCGAGGGAATGCCTTTGAGAAACTCAGAGGAACAATCATTGAGCTTAGAAAATGCTTTGCAACATGATGGATGAGGAGCAACTGCATTTTTCAATTGAGAGTGTGAAAATGGTTAATTAAGAGAAGGATTGAATTAGAAACAACGGTGAGGACTGAGGCTGTGTTTTTGGTTAGAGTGAGAAAATGGGGGCTTACTAAGGAGGGTTAGATATAGGGGGTGGGGGGAATATTAAATTTGGAAACGTTTGGGATCATTATGGCAATTAAAAACTGCAATTATATTGTTAACCTCCTATTCTCTTACAAATTCCGTGTCTCATGACTGCCATTCCATCTCCGATGATTACTCCGAATTTAGTTCCTTTTATGATTGGTAACCTTAATTGACCTACCATTTTCTAACTAATAAAGTTTTGGGTTGCACCACTTTCAGTTAGAACAATTACTCCTCTTTCCTTTACCTCTTCTCATAGCTTGATAGTCCCTTTTTTCGAAAACTCGAGGATGTTGTGCCATGAAATTTCCGTTTGCTCTGTGACTTCCATAGTCTTCAATTTGACTGTTTCAACCTTAGTTTCTTCGATGGCGACACCTTCTTCCGTTTCTTCCTCTTTATTCATTATAAAAATATTAGTTCACAACTTTCTTTCACCTTCAACAATGACCGTGCGAGTACTTTTCATTACACCAGAAACACAATCCCTTGTCAAGTAATGCCGAGAATTCGTTGTCGAAGAGTCTCATCCCTAGCGGCTCTCTCTTTGTGTAATTCTCACGCAAGGGTATGGAGATCTGTCGCATCGAGTTACGTTTCCCTTTGGCCCACTTTTCTCCATATTAGGAGCCAACATTCTTAACTGGTTGTGCTTCTTTCTTTCTAGGTCCATGGGCTCTTAGCTCACTGAAAGCTAATTTTAGGGCAACATCTATCGTTCACCAACTGGGCCTCCTTCATAGACTCCTCTAAGGTTTTCAGATGCCTACTCACGACTTCAGCTTGTAATTTTGGCTCCAATCTCATCACGAAGGTGTCAATTTATACACTCTAAGCCATCTTCAGCAATAGTGCCGAATAACTCAAGAACTTCTTCAAATAATCTGTGTAGGTCTCTTCTTGCTTGATTCTTATCAATCTTGCTCCCAAACTCCCTTTTTTCGGTTGGTAAAAAATGTTTGAACATCCGATTCTTCAAGTCCTCCCACGAAGTCACCTTCCTCCTGTTATTGCTCCATCCGAACCAATCCACCTCATAAGGAGCGAAGCTGATCACTGCAACCTTTACCTTCTCTTCTTCCGCTAGATCATTGATTTCAAAGTAATTCTCGACTCTATAAAGCTATGACTCCTAATTCACCCTTGAAAAATTGGCACCTCAAGTTTCTTGTACTTACTTTTATCCACCGATTCCCCACCCAGACAGGATGTCAACTCCGTCTCATCAGCTTTACCTTTCATTTTGAGTCTTGATCCATCATTGGTACTCGGTTCCTTTTTCTGCCTGAGAGAGTTGTTCACATCTTTCGCCAACTTTTCAACAGATCTCTTTAGCGAGAGGATCATCTCCTTAATTCCCATAATTTCCTTCTCGCTTGACTGCATTCTCTCTCTTCTAATTGTTTTTGCGCCACGGATATCGTTCGAACCAGAATGATTGCATTTTCTCTTCTAATTGTTTTTGTGCCACGGATATTGTTCGAGCCAGAATGTTAAGGCTCTGATACCAATTTGTTAAGATTCTCCAACTTGAAACTTAGAAAATCCCAACATTGTTTAATCCCAACAATTGCCAAAACAGAGACTGTACTCTGAAATAGTATATTGAACAATAAACCAATAGAGTTCCACAGGCACTCAATCAATGAAAAGAACACAAAAGGGAAGAATATAGGAACGATAATGGAAATATCTTAAATCCTTTGAGAAGTCTGGCAACTTTTCCCTAAAAAGCTCTCAGCAGCTACTTACCAAACAAAACTCATAAGTTGTAACTCAGCAATCCCAAAACATTCATTTTTATACCAGCACCATAGTGGGCCCTCAGGTGTCTCCTTCCTCTCAAATGAGCCTCCAGATGAATCCTTCCATGAATTCCCCTTCTTGTCCCTTCTTTTATAAGTACGAAGAATTGGGGGCCCAACAGTTGCTAAGAAACTGGACAATACCCTTGACAAAATAACTCAATTCAACTCTCCAAATATAGATTTGAAAAATAGTCGAATCGAGTTGAGTTGACAATTCTATCCTGCGTGCTAAACTAATTGTGAGGTAAGAGGTGAGGGATGGTTAAACTCAATAACAATTTAAAACTTTTTGTGTTCTGCAGATCTGTGTCCTAGTTTTTTTTTTTTTATCTATGTTCAGTTAATTGATCTTAGATTTTTGTATTCTACCGGGATTCTAAATACCACCTTTAAAGTTTTGTGCTTATGTTTTCATCTATTTGTGTTCCACAGGGATTCTGTTCTATGATTCAATAATTCACTGATATTGCATTGAAGAAATAATGAAGCTGACTGTAGTTGCACGATCCCTTCAAGCCCGTTCCACACTTACTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTACTCCTAGGGACCCAAAGGCCAAGCCAAAAAAGTACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCCTCTGATAAAATCATTGCGCTTGCTGAAAGAATTGCAGCACTGCCTGCTGCTGAGCGTTCCCAGATTGGTCCCACACTCGGCGAAAAACTTAGACATCCTAAGCTGCAGGAAATTTCAGTGGATGGCTTGGACATGGGTTCGGAAGGAGGGGCAGCGGCAGGATCTTCCAATGTGGAAGAGAAAAAAGAAAAAACTGCTTTTGATGTGAAGCTAGAGAAGTTTGATGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGGCCTTCACTAATTTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCGATTCTCAAGCAAGGGGTGACCAAGGAGGAAGCAAACGGCATCATCGAAAAGATCAAAGCTGCTGGAGGAGTTGCTGTGATGGAGTAG

mRNA sequence

CCTTCAAGTCTTTTGTCGCCGCCACGCCAGCCACCTCGCCCCCTGACGCGGGCTCCTTTCCTCTCGCCAGCATTTCTCTCTTTCTCTCCTCTCCCACACGCCGACGACTAATCGGCTGAACGCCGTCCAGCCAAACGCACCGCCGCCAGCTCTCGCCGCGCAGGATCGAAGTTGCTAGCCGATCTGTGTTGTACTTTGTCCCTTCTCCGATCAGCCACTGTCTTCCGATTGGAAGTCGTTCACTAACTCCTGGCCGTCGGATTTTGTTTGTCGTGCACGCTGCCGCTTGGCCCACAGTCACGCTACCCAGAGATTCGTTTCGCGCTGCTACGGAATTCAAAGTCGTAGCGCCCAAATCTTGCTACTCGGACCCGAGTCCTGTGTAGGGCTAGTTGTCCTTTCTGTTCGTGTGTCGACAGAGCCTCCTATCTGCTCGCAAGCTTCGAATCTCCGCTGTATTTCCAGTATTAAAATTGAGTTCTTGGAAGGACTTAGCTACTGTCTAGCCGAGGAGTGAATTTTTGCATGTTCTGGCACACTCTAGGCACCCAACTATCTACCCTCTGCTATGGCCGTGCTTTGTACTGCTCCATTTCTAGACCCACTTGCCTGAATCATGGTTTTTGTTGTCTGTGGGTTTTTGGGGTTGTGACGTGAGTGTGATTTTTCCCCCATATGCGAGATAGAGCTTGTGATATGTGGAAGAAAATGTTAGGGATTCTGTTCTATGATTCAATAATTCACTGATATTGCATTGAAGAAATAATGAAGCTGACTGTAGTTGCACGATCCCTTCAAGCCCGTTCCACACTTACTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTACTCCTAGGGACCCAAAGGCCAAGCCAAAAAAGTACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCCTCTGATAAAATCATTGCGCTTGCTGAAAGAATTGCAGCACTGCCTGCTGCTGAGCGTTCCCAGATTGGTCCCACACTCGGCGAAAAACTTAGACATCCTAAGCTGCAGGAAATTTCAGTGGATGGCTTGGACATGGGTTCGGAAGGAGGGGCAGCGGCAGGATCTTCCAATGTGGAAGAGAAAAAAGAAAAAACTGCTTTTGATGTGAAGCTAGAGAAGTTTGATGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGGCCTTCACTAATTTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCGATTCTCAAGCAAGGGGTGACCAAGGAGGAAGCAAACGGCATCATCGAAAAGATCAAAGCTGCTGGAGGAGTTGCTGTGATGGAGTAG

Coding sequence (CDS)

ATGAAGCTGACTGTAGTTGCACGATCCCTTCAAGCCCGTTCCACACTTACTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTACTCCTAGGGACCCAAAGGCCAAGCCAAAAAAGTACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCCTCTGATAAAATCATTGCGCTTGCTGAAAGAATTGCAGCACTGCCTGCTGCTGAGCGTTCCCAGATTGGTCCCACACTCGGCGAAAAACTTAGACATCCTAAGCTGCAGGAAATTTCAGTGGATGGCTTGGACATGGGTTCGGAAGGAGGGGCAGCGGCAGGATCTTCCAATGTGGAAGAGAAAAAAGAAAAAACTGCTTTTGATGTGAAGCTAGAGAAGTTTGATGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGGCCTTCACTAATTTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCGATTCTCAAGCAAGGGGTGACCAAGGAGGAAGCAAACGGCATCATCGAAAAGATCAAAGCTGCTGGAGGAGTTGCTGTGATGGAGTAG
Homology
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BLAST of MELO3C003920 vs. Swiss-Prot
Match: RL7_PROM1 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL1A) GN=rplL PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-16
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 109 GAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILK 168
           GAAAG    +  +EKT F+V LE FDA+SKIKV+KEVR  T LGL EAK LVE  P  +K
Sbjct: 47  GAAAGGDGADAAEEKTEFEVVLESFDASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIK 106

Query: 169 QGVTKEEANGIIEKIKAAGGVAVME 194
           +G TKE+A  + + I+A GG   ++
Sbjct: 107 EGATKEDAEALKKAIEAVGGKVTLK 131

[Close]
BLAST of MELO3C003920 vs. Swiss-Prot
Match: RL7_PROMT (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL2A) GN=rplL PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-16
Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 109 GAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILK 168
           GAAAG    +  +EKT F+V LE F+A+SKIKV+KEVR  T LGL EAK LVE  P  +K
Sbjct: 47  GAAAGGDGADAAEEKTEFEVVLESFEASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIK 106

Query: 169 QGVTKEEANGIIEKIKAAGGVAVME 194
           +G TKE+A  + + I+A GG   ++
Sbjct: 107 EGATKEDAEALKKAIEAVGGKVTLK 131

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BLAST of MELO3C003920 vs. Swiss-Prot
Match: RL7_LIBAF (50S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.4e-16
Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 1 

Query: 63  IIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEKKE 122
           I ++ E++++L   + +++   L E+        ++V     G    A A         E
Sbjct: 4   IESIVEKLSSLTLLQAAELSKRLEEEWGVSAAAPVAVVASAAGESAAAVA---------E 63

Query: 123 KTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIEK 182
           KT F+V LE FDA  KI VIKEVRA T LGLKEAKD VE  P  LK GV+K+EA  + +K
Sbjct: 64  KTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKK 123

Query: 183 IKAAGGVAVM 193
           ++AAG   ++
Sbjct: 124 LEAAGATIIL 124

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BLAST of MELO3C003920 vs. Swiss-Prot
Match: RL7_PROM4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplL PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1 

Query: 101 GLDMGSEGGAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLV 160
           G+ M + G     S+  E  +EKT FDV LE FDAA+KIKV+KEVR  T LGL EAK +V
Sbjct: 40  GVVMAAPGAGGGASAAGEAAEEKTEFDVILESFDAAAKIKVLKEVRNATGLGLGEAKAMV 99

Query: 161 EKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 194
           E  P  +K+G +KE+A  + + I+A GG   ++
Sbjct: 100 EAAPKTIKEGASKEDAEALKKAIEAVGGKVTLK 132

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BLAST of MELO3C003920 vs. Swiss-Prot
Match: RL7_SYNPX (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102) GN=rplL PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-15
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 109 GAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILK 168
           GAAAG    E  +EKT FDV LE FDAA+KIKV+K VR  T LGL +AK LVE  P  +K
Sbjct: 47  GAAAGGGGGEVAEEKTEFDVILESFDAAAKIKVLKAVRNATGLGLGDAKALVEAAPKPIK 106

Query: 169 QGVTKEEANGIIEKIKAAGGVAVME 194
           +G++K+EA  + ++I+  GG   ++
Sbjct: 107 EGISKDEAEALKKEIEEVGGKVTLK 131

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BLAST of MELO3C003920 vs. TrEMBL
Match: A0A0A0L907_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G623960 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.1e-96
Identity = 183/193 (94.82%), Postives = 184/193 (95.34%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKLTVVA+SLQ RST  KIIGLSQVRFFQPDFTPRDP AKPKKYKYP FYDPYGPRPPPS
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERI ALPAAER QIGPTLGEKLRHPKLQEISVDGLDMG EGGAAAGSSNVEEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

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BLAST of MELO3C003920 vs. TrEMBL
Match: A0A067KFQ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11471 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.3e-77
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           M+   +ARS++ RST  +I GL QVRFFQ DF PRDP  KPKKYKYP FYDPYGPRPPPS
Sbjct: 1   MRFIALARSIRGRSTFQEITGLLQVRFFQHDFVPRDPNTKPKKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERIAALP  E+ QIGPTL  KL+HPKLQ IS +G+D+G +G  A G + VEEK
Sbjct: 61  DKIIQLAERIAALPLEEQRQIGPTLQRKLKHPKLQSISTEGMDLGPQGAQATGGTKVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAA+KIKVIKEVR FT+LGLKEAKDLVEKVP +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPVLLKQGVTKEEANEII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

[Close]
BLAST of MELO3C003920 vs. TrEMBL
Match: A0A059CHD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02092 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-76
Identity = 151/194 (77.84%), Postives = 163/194 (84.02%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKL +V RS   R  L  I G  Q R FQ DF PRDPKAKPKKYKYP FYDPYGPRPPPS
Sbjct: 6   MKLDLVVRSAYVRLGLRGITGPLQTRSFQHDFVPRDPKAKPKKYKYPAFYDPYGPRPPPS 65

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERIA LPA ER+QIGP L E+L+HPK+Q IS +G+D+G +GGA AGS+  EEK
Sbjct: 66  DKIIQLAERIAGLPAEERAQIGPALQERLKHPKMQTISTEGMDLGPQGGAGAGSAKAEEK 125

Query: 121 K-EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGI 180
           K EKTAFDVKLEKFDAA+KIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTKEEANGI
Sbjct: 126 KAEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPILLKQGVTKEEANGI 185

Query: 181 IEKIKAAGGVAVME 194
           IEKIKAAGGVAVME
Sbjct: 186 IEKIKAAGGVAVME 199

[Close]
BLAST of MELO3C003920 vs. TrEMBL
Match: B9RB19_RICCO (50S ribosomal protein L7/L12, putative OS=Ricinus communis GN=RCOM_1510530 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.2e-76
Identity = 147/193 (76.17%), Postives = 162/193 (83.94%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MK   + RS+  R TL +I G  QVRFFQ DF PRDPK  P+KYKYP FYDPYGPRPPPS
Sbjct: 1   MKFVPLLRSVSTRYTLREITGPLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKI+ LAERIAALP  ER QIGPTL  KL HPKLQ IS +G+D+G++G  AA ++ VEEK
Sbjct: 61  DKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAA+KIKVIKEVRAFTNLGLKEAKDLVEK PA+LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVA+ME
Sbjct: 181 EKIKAAGGVAIME 193

[Close]
BLAST of MELO3C003920 vs. TrEMBL
Match: B9IES3_POPTR (Ribosomal protein L12 OS=Populus trichocarpa GN=POPTR_0015s08820g PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-75
Identity = 150/195 (76.92%), Postives = 167/195 (85.64%), Query Frame = 1 

Query: 1   MKLTVVARSLQARS-TLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPP 60
           MK   +ARS+ A    L +I G  QVR+FQ DF PRDPK KPKKYKYP +YDPYGPRPPP
Sbjct: 1   MKFIALARSVCAHHPALREITGPLQVRYFQHDFVPRDPKTKPKKYKYPLYYDPYGPRPPP 60

Query: 61  SDKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGG-AAAGSSNVE 120
           S+KII +AERIAALP  ERSQIG  LG KL+HPKLQ IS +G+ +GS+GG AAAG++ VE
Sbjct: 61  SEKIIEIAERIAALPPEERSQIGSALGYKLKHPKLQPISTEGMGLGSQGGEAAAGAAKVE 120

Query: 121 EKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANG 180
           EKKEKTAFDVKLEKFDAA+KIKVIKEVRAFTNLGLKEAKDLVEKVP +LKQGVTK+EANG
Sbjct: 121 EKKEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPCVLKQGVTKDEANG 180

Query: 181 IIEKIKAAGGVAVME 194
           IIEKIKAAGGVAVME
Sbjct: 181 IIEKIKAAGGVAVME 195

[Close]
BLAST of MELO3C003920 vs. TAIR10
Match: AT3G06040.1 (AT3G06040.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 233.8 bits (595), Expect = 9.0e-62
Identity = 129/193 (66.84%), Postives = 142/193 (73.58%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKL  + R++++R    ++I   QVRF Q D      KAKPKKYKYP  YDPYGPRP PS
Sbjct: 1   MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
            KI+ LAERIAAL   ER QIGP L E LR PK Q IS DG+    + GA     NVEEK
Sbjct: 61  SKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAG----NVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKF+A+ KIKVIKEVR FT+LGLKEAK+LVEKVPAILKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEII 180

Query: 181 EKIKAAGGVAVME 194
            KIKA GG+AVME
Sbjct: 181 AKIKAVGGIAVME 186

[Close]
BLAST of MELO3C003920 vs. TAIR10
Match: AT1G70190.1 (AT1G70190.1 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like)

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-30
Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 1 

Query: 36  DPKAKPKKYKYPPFYDPYGPRPPPSDKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQ 95
           D +  P  Y  P  +DP   R PP+D++  L + I++L   E S++G  + +K    +L 
Sbjct: 45  DQRKLPTDYD-PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELP 104

Query: 96  EISV------DGLDMGSEGGAAAGSSNVEEKK-EKTAFDVKLEKFDAASKIKVIKEVRAF 155
            ++V       G+ +G  GG  + S   EE K EKT F++KLE F+A++KIK+IKE+R+F
Sbjct: 105 TVAVMKPGAGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSF 164

Query: 156 TNLGLKEAKDLVEKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 194
           T+LGLKEAK LVEK PAILK G++KEE   I+EK+KA G   V+E
Sbjct: 165 TDLGLKEAKALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 208

[Close]
BLAST of MELO3C003920 vs. TAIR10
Match: AT4G37660.1 (AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-24
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 105 GSEGGAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVP 164
           GS G A+A +    +  EKT FDVKLEKF+AASKIKVIKE+RAFT+LGLKEAK LVEK P
Sbjct: 81  GSVGDASASTET--KTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAP 140

Query: 165 AILKQGVTKEEANGIIEKIKAAGGVAVME 194
            I+K G+TKEEA  I+EK+KA G +  +E
Sbjct: 141 VIVKNGLTKEEAEKIMEKLKAVGAIVALE 167

[Close]
BLAST of MELO3C003920 vs. TAIR10
Match: AT4G36420.1 (AT4G36420.1 Ribosomal protein L12 family protein)

HSP 1 Score: 109.0 bits (271), Expect = 3.3e-24
Identity = 63/145 (43.45%), Postives = 84/145 (57.93%), Query Frame = 1 

Query: 53  YGPRPPPSDKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEIS--VDGLDMGSEGGA 112
           Y      S+ +  +   ++ L   E   +   L +KL   +L  ++  + G+ +   G +
Sbjct: 35  YSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSLPGSGAS 94

Query: 113 --AAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILK 172
             A G    ++K+ KTAFDV L+ +DA SKIKVIKEVR  T LGLKEAKDLVEK P +LK
Sbjct: 95  KSAGGEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAPTLLK 154

Query: 173 QGVTKEEANGIIEKIKAAGGVAVME 194
           +GV+KEEA  IIEK+KA G    ME
Sbjct: 155 KGVSKEEAEKIIEKLKAVGAKVAME 179

[Close]
BLAST of MELO3C003920 vs. TAIR10
Match: AT2G03130.1 (AT2G03130.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1 

Query: 109 GAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILK 168
           G + G +N   K EKT F+VKLE F+A +KIK+IKEVR    +GLKEA  LV K P +LK
Sbjct: 7   GQSGGGANEGAKAEKTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLK 66

Query: 169 QGVTKEEANGIIEKIKAAGGVAVME 194
            G++KEE   ++EK+ A G  AV++
Sbjct: 67  TGLSKEEGEEVVEKLNALGAEAVLQ 91

[Close]
BLAST of MELO3C003920 vs. NCBI nr
Match: gi|659069543|ref|XP_008450561.1| (PREDICTED: 50S ribosomal protein L12, chloroplastic [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-101
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS
Sbjct: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK
Sbjct: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

[Close]
BLAST of MELO3C003920 vs. NCBI nr
Match: gi|778682047|ref|XP_011651634.1| (PREDICTED: 50S ribosomal protein L12, chloroplastic [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 183/193 (94.82%), Postives = 184/193 (95.34%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKLTVVA+SLQ RST  KIIGLSQVRFFQPDFTPRDP AKPKKYKYP FYDPYGPRPPPS
Sbjct: 1   MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERI ALPAAER QIGPTLGEKLRHPKLQEISVDGLDMG EGGAAAGSSNVEEK
Sbjct: 61  DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

[Close]
BLAST of MELO3C003920 vs. NCBI nr
Match: gi|802652306|ref|XP_012080061.1| (PREDICTED: 50S ribosomal protein L12, chloroplastic [Jatropha curcas])

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           M+   +ARS++ RST  +I GL QVRFFQ DF PRDP  KPKKYKYP FYDPYGPRPPPS
Sbjct: 1   MRFIALARSIRGRSTFQEITGLLQVRFFQHDFVPRDPNTKPKKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERIAALP  E+ QIGPTL  KL+HPKLQ IS +G+D+G +G  A G + VEEK
Sbjct: 61  DKIIQLAERIAALPLEEQRQIGPTLQRKLKHPKLQSISTEGMDLGPQGAQATGGTKVEEK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
           KEKTAFDVKLEKFDAA+KIKVIKEVR FT+LGLKEAKDLVEKVP +LKQGVTKEEAN II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPVLLKQGVTKEEANEII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

[Close]
BLAST of MELO3C003920 vs. NCBI nr
Match: gi|658057652|ref|XP_008364609.1| (PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Malus domestica])

HSP 1 Score: 296.6 bits (758), Expect = 3.2e-77
Identity = 149/193 (77.20%), Postives = 164/193 (84.97%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           M+L  +ARS +AR TL +  G  Q R FQPDF PRDP AKPKKYKYP FYDPYGPRPPPS
Sbjct: 1   MRLIALARSFRARPTLPETTGPLQFRCFQPDFVPRDPSAKPKKYKYPAFYDPYGPRPPPS 60

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKI+ LAERIAAL   ER Q+GPTL E+LRHPKLQ IS +G+D+GS+GGAAAGS   E+K
Sbjct: 61  DKIVQLAERIAALAPEERRQLGPTLAERLRHPKLQPISTEGMDLGSQGGAAAGSKAEEKK 120

Query: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
            EKTAFDVKLEKFDAA+KIKVIKEVR FT+LGLKEAKDLVEKVP +LKQGVTKEEAN II
Sbjct: 121 VEKTAFDVKLEKFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPCVLKQGVTKEEANDII 180

Query: 181 EKIKAAGGVAVME 194
           EKIKAAGGVAVME
Sbjct: 181 EKIKAAGGVAVME 193

[Close]
BLAST of MELO3C003920 vs. NCBI nr
Match: gi|702325563|ref|XP_010053490.1| (PREDICTED: 50S ribosomal protein L12, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 151/194 (77.84%), Postives = 163/194 (84.02%), Query Frame = 1 

Query: 1   MKLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPS 60
           MKL +V RS   R  L  I G  Q R FQ DF PRDPKAKPKKYKYP FYDPYGPRPPPS
Sbjct: 6   MKLDLVVRSAYVRLGLRGITGPLQTRSFQHDFVPRDPKAKPKKYKYPAFYDPYGPRPPPS 65

Query: 61  DKIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEK 120
           DKII LAERIA LPA ER+QIGP L E+L+HPK+Q IS +G+D+G +GGA AGS+  EEK
Sbjct: 66  DKIIQLAERIAGLPAEERAQIGPALQERLKHPKMQTISTEGMDLGPQGGAGAGSAKAEEK 125

Query: 121 K-EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGI 180
           K EKTAFDVKLEKFDAA+KIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTKEEANGI
Sbjct: 126 KAEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPILLKQGVTKEEANGI 185

Query: 181 IEKIKAAGGVAVME 194
           IEKIKAAGGVAVME
Sbjct: 186 IEKIKAAGGVAVME 199

The following BLAST results are available for this feature:
BLAST of MELO3C003920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL7_PROM11.1e-1652.9450S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL1A) GN=rplL ... [more]
RL7_PROMT3.1e-1651.7650S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL2A) GN=rplL ... [more]
RL7_LIBAF5.4e-1639.2350S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3 SV=1[more]
RL7_PROM41.2e-1547.3150S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) GN=rpl... [more]
RL7_SYNPX3.5e-1550.5950S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102) GN=rplL PE=3 S... [more]
BLAST of MELO3C003920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L907_CUCSA8.1e-9694.82Uncharacterized protein OS=Cucumis sativus GN=Csa_3G623960 PE=4 SV=1[more]
A0A067KFQ9_JATCU1.3e-7776.68Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11471 PE=4 SV=1[more]
A0A059CHD8_EUCGR1.1e-7677.84Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02092 PE=4 SV=1[more]
B9RB19_RICCO3.2e-7676.1750S ribosomal protein L7/L12, putative OS=Ricinus communis GN=RCOM_1510530 PE=4 ... [more]
B9IES3_POPTR2.1e-7576.92Ribosomal protein L12 OS=Populus trichocarpa GN=POPTR_0015s08820g PE=4 SV=1[more]
BLAST of MELO3C003920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06040.19.0e-6266.84 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein Cl... [more]
AT1G70190.12.4e-3044.24 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, ... [more]
AT4G37660.12.5e-2464.04 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein Cl... [more]
AT4G36420.13.3e-2443.45 Ribosomal protein L12 family protein[more]
AT2G03130.13.6e-1850.59 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein Cl... [more]
BLAST of MELO3C003920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069543|ref|XP_008450561.1|2.4e-101100.00PREDICTED: 50S ribosomal protein L12, chloroplastic [Cucumis melo][more]
gi|778682047|ref|XP_011651634.1|1.2e-9594.82PREDICTED: 50S ribosomal protein L12, chloroplastic [Cucumis sativus][more]
gi|802652306|ref|XP_012080061.1|1.9e-7776.68PREDICTED: 50S ribosomal protein L12, chloroplastic [Jatropha curcas][more]
gi|658057652|ref|XP_008364609.1|3.2e-7777.20PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Malus domestica][more]
gi|702325563|ref|XP_010053490.1|1.6e-7677.84PREDICTED: 50S ribosomal protein L12, chloroplastic [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013823Ribosomal_L7/L12_C
IPR014719Ribosomal_L7/12_C/ClpS-like
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006508 proteolysis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46980melon EST collection version 4.0transcribed_cluster
MU66574melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003920T3MELO3C003920T3mRNA
MELO3C003920T2MELO3C003920T2mRNA
MELO3C003920T1MELO3C003920T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46980MU46980transcribed_cluster
MU66574MU66574transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003920Watermelon (97103) v2mewmbB369
MELO3C003920Wax gourdmewgoB464
MELO3C003920Cucumber (Gy14) v1cgymeB320
MELO3C003920Cucurbita maxima (Rimu)cmameB175
MELO3C003920Cucurbita maxima (Rimu)cmameB737
MELO3C003920Cucurbita moschata (Rifu)cmomeB164
MELO3C003920Cucurbita moschata (Rifu)cmomeB725
MELO3C003920Wild cucumber (PI 183967)cpimeB139
MELO3C003920Cucumber (Chinese Long) v2cumeB139
MELO3C003920Watermelon (Charleston Gray)mewcgB367
MELO3C003920Watermelon (97103) v1mewmB422
MELO3C003920Cucurbita pepo (Zucchini)cpemeB102
MELO3C003920Cucurbita pepo (Zucchini)cpemeB777
MELO3C003920Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C003920Cucumber (Gy14) v2cgybmeB120
MELO3C003920Silver-seed gourdcarmeB0004
MELO3C003920Silver-seed gourdcarmeB0170
MELO3C003920Cucumber (Chinese Long) v3cucmeB141